NonredundantMotifs:111

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known111
• db :HOMER
• Id :PBX1_MCF7-PBX1-ChIP-Seq(GSE28007)
• name  :
• score :0.0635317205896486
  
• External refs:

EntrezGene:5087
UniProt:5087

• Internal refs:

EntrezGene:5087

Motif matrix
PO A C G T 1 163 29 603 84 2 7 470 376 26 3 1 868 9 1 4 19 1 1 858 5 1 1 876 1 6 3 65 1 810 7 1 875 2 1 8 862 2 1 14 9 250 435 190 4 10 1 14 12 852 11 2 873 3 1 12 860 2 1 16