NonredundantMotifs:63

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known63
• db :HOCOMOCO
• Id :HSF1_f2
• name  :
• score :0.08200527717586725
  
• External refs:

EntrezGene:3297
UniProt:3297

• Internal refs:

EntrezGene:3297

Motif matrix

P0 A C G T 1 900.2845056299682 246.88800493452695 721.1799420798628 212.64754735563767 2 146.01881823238054 67.73232407111735 1805.0321750803907 62.216682616085315 3 1751.5739590065257 99.77980189455575 71.5051721565525 158.141066942346 4 1697.8530988954549 157.11720535488485 144.14496231636025 81.88473343328027 5 609.4278829797199 445.70595574948914 529.7633735450328 496.10278772574895 6 594.1774530313412 479.6872437161541 707.4864473967361 299.64885585576053 7 290.53444813127476 202.80516174675523 255.71263568374872 1331.9477544382094 8 282.0370473183119 221.85294041580795 223.90424395206676 1353.2057683137991 9 162.86867034941415 1619.2260202016191 222.78392591927684 76.12138352966903 10 208.6801128726763 669.6659486867103 352.9832653047999 849.6706731358073 11 1286.1693450768125 188.63760223889088 504.9312080246656 101.26184465961872 12 118.21530589157489 68.43800450894031 1846.6545562996614 47.6921332997975 13 1544.241468601316 224.01478849514342 186.98043171605383 125.76331118746903 14 1566.5081939186678 99.65095058987866 292.09906037919734 122.74179511223859