NonredundantMotifs:8

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known8
• db :SWISSREGULON
• Id :PITX1..3.p2
• name :PITX1
• score :0.3171283104135989
  
• External refs:

EntrezGene:PITX1
UniProt:PITX1

• Internal refs:

EntrezGene:PITX1

Motif matrix
PO A C G T 1 11.023056 3.306158 0.833466 70.843797 2 5.126488 6.994371 56.933463 16.952155 3 1.575346 0 0 84.431131 4 77.786275 6.577658 0.83564 0.806904 5 75.656821 0 10.349656 0 6 0 0.908504 0 85.097973 7 0 85.217965 0 0.788512 8 2.548872 82.654094 0 0.803511 9 8.519188 76.552727 0.934562 0 10 82.778273 0 0.785576 2.442628 11 22.505869 3.328835 60.171773 0