NonredundantMotifs:18

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known18
• db :SWISSREGULON
• Id :TFAP4.p2
• name  :
• score :1.850544091503666
  
• External refs:

• Internal refs:

Motif matrix

PO A C G T 1 100.935919 11.339498 15.571054 42.704675 2 28.796877 27.043595 108.487002 6.223672 3 63.310961 54.774655 49.972215 2.493315 4 61.202942 32.822763 69.017879 7.507562 5 24.335405 66.966706 30.584107 48.664928 6 1.72718 158.486297 4.282668 6.055001 7 161.95321 1.728932 0.981535 5.887469 8 8.358101 2.705957 157.043749 2.443339 9 0 162.833569 3.313998 4.403579 10 12.411169 8.249244 14.124317 135.766416 11 4.734487 29.51466 133.941244 2.360755 12 5.835922 70.070533 38.083636 56.561055 13 44.02001 3.053394 105.400631 18.077111 14 4.804799 5.824147 153.431742 6.490458 15 20.546444 72.962628 41.178524 35.86355 16 13.446756 145.241133 5.226867 6.63639 17 77.086218 27.83045 37.080635 28.553843 18 8.434218 12.910522 119.616812 29.589594