Personal tools

CL:0000038

From FANTOM5_SSTAR

Revision as of 17:35, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search
Name:erythroid progenitor cell
Namespace:efo
Definition:"A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative)." [GOC:add, ISBN:0721601464]
Xrefs:
links:
BTO:0004911
Synonyms: "BFU-E" RELATED []
"blast forming unit erythroid" RELATED []
"burst forming unit erythroid" RELATED []
"CFU-E" RELATED []
"colony forming unit erythroid" RELATED []
"erythroid stem cell" RELATED []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000764(erythroid lineage cell),CL:0000839(myeloid lineage restricted progenitor cell)
develops_from:CL:0000050(megakaryocyte-erythroid progenitor cell)



Children


is a:FF:0000055 (erythroid progenitor cell)
develops from:CL:0000547 (proerythroblast)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000038 (erythroid progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.29e-195FFCP PHASE2:Hg19::chr15:71406717..71406718,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr15:71406717..71406718, +
3.29e-195FFCP PHASE2:Hg19::chr7:23205201..23205207,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p13@KLHL7
3.29e-195FFCP PHASE2:Hg19::chr14:96742091..96742094,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:96742091..96742094, -
3.29e-195FFCP PHASE2:Hg19::chr12:131245491..131245492,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr12:131245491..131245492, +
3.29e-195FFCP PHASE1:Hg19::chr6:10585661..10585670,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p26@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr17:42343955..42343974,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr17:42343955..42343974, -
3.29e-195FFCP PHASE1:Hg19::chr14:55799575..55799582,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:55799575..55799582, +
3.29e-195FFCP PHASE2:Hg19::chr4:175593804..175593809,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:175593804..175593809, +
3.29e-195FFCP PHASE1:Hg19::chr4:175593804..175593809,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:175593804..175593809, +
3.29e-195FFCP PHASE2:Hg19::chr9:138852021..138852030,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:138852021..138852030, +
3.29e-195FFCP PHASE1:Hg19::chr10:94679592..94679594,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr10:94679592..94679594, -
3.29e-195FFCP PHASE1:Hg19::chr1:25599018..25599028,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RHD
3.29e-195FFCP PHASE2:Hg19::chr6:10585672..10585677,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p42@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr1:25599018..25599028,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RHD
3.29e-195FFCP PHASE2:Hg19::chr17:42392517..42392522,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p17@RUNDC3A
3.29e-195FFCP PHASE2:Hg19::chr2:71833597..71833600,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:71833597..71833600, +
3.29e-195FFCP PHASE1:Hg19::chr2:71833597..71833600,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:71833597..71833600, +
3.29e-195FFCP PHASE2:Hg19::chr4:190941380..190941381,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:190941380..190941381, +
3.29e-195FFCP PHASE2:Hg19::chr3:49726561..49726577,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RNF123
3.29e-195FFCP PHASE2:Hg19::chr19:19535964..19535966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr19:19535964..19535966, +
3.29e-195FFCP PHASE1:Hg19::chr4:190941380..190941381,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:190941380..190941381, +
3.29e-195FFCP PHASE1:Hg19::chr3:49726561..49726577,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p3@RNF123
3.29e-195FFCP PHASE1:Hg19::chr19:19535964..19535966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr19:19535964..19535966, +
3.29e-195FFCP PHASE1:Hg19::chr13:23969126..23969130,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr13:23969126..23969130, +
3.29e-195FFCP PHASE2:Hg19::chrX:107332036..107332041,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chrX:107332036..107332041, +
3.29e-195FFCP PHASE2:Hg19::chr9:123853258..123853276,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:123853258..123853276, -
3.29e-195FFCP PHASE1:Hg19::chr7:23205201..23205207,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p13@KLHL7
3.29e-195FFCP PHASE2:Hg19::chr11:66676050..66676060,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:66676050..66676060, +
3.29e-195FFCP PHASE2:Hg19::chr1:158580993..158580998,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:158580993..158580998, -
3.29e-195FFCP PHASE2:Hg19::chr16:67228546..67228549,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:67228546..67228549, +
3.29e-195FFCP PHASE1:Hg19::chr1:158580993..158580998,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:158580993..158580998, -
3.29e-195FFCP PHASE1:Hg19::chr9:138852021..138852030,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:138852021..138852030, +
3.29e-195FFCP PHASE1:Hg19::chr11:57416011..57416016,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p9@CLP1
3.29e-195FFCP PHASE2:Hg19::chr10:86596455..86596456,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr10:86596455..86596456, +
3.29e-195FFCP PHASE1:Hg19::chr18:11740276..11740278,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr18:11740276..11740278, +
3.29e-195FFCP PHASE1:Hg19::chr12:131245491..131245492,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr12:131245491..131245492, +
3.29e-195FFCP PHASE1:Hg19::chr6:10585672..10585677,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p42@GCNT2
3.29e-195FFCP PHASE1:Hg19::chr11:115492263..115492265,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:115492263..115492265, +
3.29e-195FFCP PHASE1:Hg19::chr13:106256314..106256318,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr13:106256314..106256318, +
3.29e-195FFCP PHASE2:Hg19::chr4:160049078..160049079,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:160049078..160049079, +
3.29e-195FFCP PHASE2:Hg19::chr11:5247692..5247701,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5247692..5247701, -
3.29e-195FFCP PHASE2:Hg19::chr8:101412217..101412218,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr8:101412217..101412218, +
3.29e-195FFCP PHASE1:Hg19::chr9:123853258..123853276,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:123853258..123853276, -
3.29e-195FFCP PHASE2:Hg19::chr6:10585684..10585689,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p37@GCNT2
3.29e-195FFCP PHASE1:Hg19::chr17:27188395..27188398,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p1@MIR451A
3.29e-195FFCP PHASE2:Hg19::chr9:45465498..45465501,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:45465498..45465501, +
3.29e-195FFCP PHASE2:Hg19::chr4:26378984..26378987,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:26378984..26378987, +
3.29e-195FFCP PHASE1:Hg19::chr16:15616042..15616045,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:15616042..15616045, +
3.29e-195FFCP PHASE2:Hg19::chr3:49726589..49726592,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p7@RNF123
3.29e-195FFCP PHASE1:Hg19::chr4:26378984..26378987,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:26378984..26378987, +
3.29e-195FFCP PHASE1:Hg19::chr3:49726589..49726592,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p7@RNF123
3.29e-195FFCP PHASE2:Hg19::chr11:5255612..5255613,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p10@HBD
3.29e-195FFCP PHASE2:Hg19::chr13:78682773..78682778,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr13:78682773..78682778, +
3.29e-195FFCP PHASE2:Hg19::chr11:57415965..57415973,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p5@CLP1
3.29e-195FFCP PHASE2:Hg19::chr2:112191654..112191660,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:112191654..112191660, -
3.29e-195FFCP PHASE2:Hg19::chr11:29581179..29581180,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:29581179..29581180, +
3.29e-195FFCP PHASE1:Hg19::chr2:112191654..112191660,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:112191654..112191660, -
3.29e-195FFCP PHASE2:Hg19::chr14:55799575..55799582,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:55799575..55799582, +
3.29e-195FFCP PHASE1:Hg19::chr12:75560876..75560881,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr12:75560876..75560881, +
3.29e-195FFCP PHASE1:Hg19::chr1:25598961..25598966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p5@RHD
3.29e-195FFCP PHASE2:Hg19::chr1:207823590..207823599,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:207823590..207823599, +
3.29e-195FFCP PHASE1:Hg19::chr4:160049078..160049079,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr4:160049078..160049079, +
3.29e-195FFCP PHASE2:Hg19::chr1:25598961..25598966,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p5@RHD
3.29e-195FFCP PHASE2:Hg19::chr16:227522..227524,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:227522..227524, +
3.29e-195FFCP PHASE1:Hg19::chr6:10585684..10585689,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p37@GCNT2
3.29e-195FFCP PHASE1:Hg19::chr15:71406717..71406718,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr15:71406717..71406718, +
3.29e-195FFCP PHASE1:Hg19::chr8:101412217..101412218,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr8:101412217..101412218, +
3.29e-195FFCP PHASE1:Hg19::chr17:42366115..42366125,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr17:42366115..42366125, +
3.29e-195FFCP PHASE1:Hg19::chr14:96742091..96742094,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr14:96742091..96742094, -
3.29e-195FFCP PHASE2:Hg19::chr11:5248435..5248444,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5248435..5248444, +
3.29e-195FFCP PHASE2:Hg19::chr6:50700492..50700495,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr6:50700492..50700495, +
3.29e-195FFCP PHASE1:Hg19::chr6:50700492..50700495,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr6:50700492..50700495, +
3.29e-195FFCP PHASE1:Hg19::chr9:45465498..45465501,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr9:45465498..45465501, +
3.29e-195FFCP PHASE2:Hg19::chr11:5247730..5247736,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5247730..5247736, -
3.29e-195FFCP PHASE1:Hg19::chr10:86596455..86596456,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr10:86596455..86596456, +
3.29e-195FFCP PHASE1:Hg19::chrX:107332036..107332041,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chrX:107332036..107332041, +
3.29e-195FFCP PHASE2:Hg19::chr2:62801311..62801318,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:62801311..62801318, +
3.29e-195FFCP PHASE2:Hg19::chr3:49726593..49726603,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p4@RNF123
3.29e-195FFCP PHASE1:Hg19::chr3:49726593..49726603,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p4@RNF123
3.29e-195FFCP PHASE1:Hg19::chr17:42343955..42343974,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr17:42343955..42343974, -
3.29e-195FFCP PHASE2:Hg19::chr21:27203678..27203684,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr21:27203678..27203684, +
3.29e-195FFCP PHASE1:Hg19::chr11:5247692..5247701,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:5247692..5247701, -
3.29e-195FFCP PHASE1:Hg19::chr1:207823590..207823599,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:207823590..207823599, +
3.29e-195FFCP PHASE1:Hg19::chr11:66676050..66676060,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:66676050..66676060, +
3.29e-195FFCP PHASE2:Hg19::chr20:24432163..24432165,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr20:24432163..24432165, +
3.29e-195FFCP PHASE1:Hg19::chr1:25598971..25598977,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p4@RHD
3.29e-195FFCP PHASE2:Hg19::chr1:2250692..2250695,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:2250692..2250695, +
3.29e-195FFCP PHASE1:Hg19::chr11:5255612..5255613,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p10@HBD
3.29e-195FFCP PHASE1:Hg19::chr1:2250692..2250695,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:2250692..2250695, +
3.29e-195FFCP PHASE2:Hg19::chr18:11740276..11740278,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr18:11740276..11740278, +
3.29e-195FFCP PHASE2:Hg19::chr13:23969126..23969130,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr13:23969126..23969130, +
3.29e-195FFCP PHASE2:Hg19::chr1:25598971..25598977,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p4@RHD
3.29e-195FFCP PHASE1:Hg19::chr11:29581179..29581180,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr11:29581179..29581180, +
3.29e-195FFCP PHASE1:Hg19::chr17:42392517..42392522,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p17@RUNDC3A
3.29e-195FFCP PHASE1:Hg19::chr2:62801311..62801318,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr2:62801311..62801318, +
3.29e-195FFCP PHASE2:Hg19::chr19:1207927..1207939,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr19:1207927..1207939, -
3.29e-195FFCP PHASE2:Hg19::chr8:138915590..138915591,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr8:138915590..138915591, +
3.29e-195FFCP PHASE1:Hg19::chr16:67228546..67228549,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr16:67228546..67228549, +
3.29e-195FFCP PHASE2:Hg19::chr1:220146675..220146678,-#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr1:220146675..220146678, -
3.29e-195FFCP PHASE1:Hg19::chr8:138915590..138915591,+#_fe2f7f6ce3d13e0762972db7eb7f2b86p@chr8:138915590..138915591, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000038&oldid=1833482"