Personal tools

UBERON:0000010

From FANTOM5_SSTAR

Revision as of 17:07, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:peripheral nervous system
Definition:"Nervous structures including ganglia outside of the central nervous system. Divided into somatic nervous system and autonomic nervous system" [FB:gg, OMD:peripheral+nervous+system, Wikipedia:Peripheral_nervous_system, ZFIN:curator]
Xrefs:
links:

AAO:0000429
BILA:0000081
BTO:0001028
EFO:0000891
EHDAA:2893
EHDAA2:0001445
EMAPA:16665
EMAPA:18370
EV:0100335
FBbt:00005098
FMA:9903
GAID:715
[ 200px-Nervous_system_diagram.png 200px-Nervous_system_diagram.png]
MA:0000218
MAT:0000338
MESH:A.08.800
MIAA:0000338
ncithesaurus:Peripheral_Nervous_System
NIF_GrossAnatomy:birnlex_1111
SCTID:362292005
TAO:0000142
VHOG:0000399
XAO:0000178

ZFA:0000142
Synonyms: "PNS" RELATED []
Comments:This class was created automatically from a combination of ontologies
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000073(regional part of nervous system)
part_of:UBERON:0001016(nervous system)



Children

part of:UBERON:0000012 (somatic nervous system),UBERON:0001021 (nerve),UBERON:0001997 (olfactory epithelium),UBERON:0002003 (peripheral nerve),UBERON:0002410 (autonomic nervous system),CL:0002573 (Schwann cell),UBERON:0003338 (ganglion of peripheral nervous system),UBERON:0006934 (sensory epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000010 (peripheral nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data