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CL:0000213

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Name:lining cell
Namespace:FANTOM
Definition:"A cell within an epithelial cell sheet whose main function is to act as an internal or external covering for a tissue or an organism." [JB:jb]
Synonyms: "boundary cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000215(barrier cell)



Children


is a:CL:0000077 (mesothelial cell),CL:0000115 (endothelial cell),CL:0000214 (synovial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000213 (lining cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.38e-90FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_072930dc9969cd3fef8b3e480eb8d3b5p@chr6:3753188..3753192, -
9.38e-90FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_072930dc9969cd3fef8b3e480eb8d3b5p@chr6:3753188..3753192, -
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr6:48398664..48398684, -
3.07e-86FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr15:88669906..88669914, +
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr9:116223548..116223551, +
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:34798555..34798562, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep8@Map3k8
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr7:118133901..118133904, -
3.07e-86FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr4:86335502..86335509, +
3.07e-86FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:93895817..93895819, -
3.07e-86FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr12:85288471..85288502, +
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr5:53111093..53111095, +
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr2:11935531..11935538, -
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr12:87046930..87046933, +
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr18:5125608..5125613, +
3.07e-86FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr15:90508949..90508955, -
3.07e-86FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr5:114422970..114422985, -
3.07e-86FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr8:114123814..114123821, -
3.07e-86FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr2:169549462..169549477, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:35106363..35106372, -
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr15:97402708..97402712, +
3.07e-86FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr7:117101788..117101793, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr4:43407825..43407830, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr1:138241693..138241697, +
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr10:93895817..93895819, -
3.07e-86FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr6:92938260..92938264, -
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr1:186559285..186559288, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_5b0c75943c8b43fa20ca5af38a0f0d0ep@chr11:109223779..109223789, -

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