NonredundantMotifs:144

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant144
• db :UNIPROBE
• Id :Sox15_secondary
• name :SCI09
• score :0.01748330691453406
  
• External refs:

EntrezGene:6665
UniProt:6665

• Internal refs:

EntrezGene:6665

Motif matrix

P0 A C G T 1 0.11071423654132 0.252496654220946 0.291510732467207 0.345278376770526 2 0.164622027457958 0.184062351258509 0.190196921787231 0.461118699496302 3 0.287350199482842 0.199873865791345 0.330361544158491 0.182414390567322 4 0.616692989383495 0.08921809886498 0.166132056830801 0.127956854920724 5 0.525716750058889 0.258234295827205 0.0597441711411141 0.156304782972791 6 0.0832739821795565 0.0964108258744388 0.0768049561551636 0.743510235790841 7 0.0495120856132103 0.0968148081788961 0.691840104331032 0.161833001876862 8 0.410478582039183 0.121469592610849 0.156168385202803 0.311883440147165 9 0.522714864002262 0.308170809274503 0.0700734434729457 0.0990408832502902 10 0.708200186903661 0.050818311548491 0.138346402143655 0.102635099404193 11 0.095092185138227 0.0561440975680816 0.158663988608885 0.690099728684807 12 0.126419068660594 0.145615803336217 0.0802242197305051 0.647740908272683 13 0.167178501985766 0.424186946584301 0.154592493025679 0.254042058404254 14 0.222121397101401 0.318065225899819 0.377920197808879 0.0818931791899011 15 0.532720378044288 0.168320201303573 0.257188306568487 0.0417711140836523