NonredundantMotifs:84

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known84
• db :SWISSREGULON
• Id :RREB1.p2
• name :RREB1
• score :1.265724185079713
  
• External refs:

EntrezGene:RREB1
UniProt:RREB1

• Internal refs:

EntrezGene:RREB1

Motif matrix

P0 A C G T 1 31.289792 225.66971 9.910344 10.746371 2 8.774075 260.087714 0.967478 7.78695 3 22.60165 247.211811 2.938054 4.864702 4 2.937916 252.305408 11.698205 10.674688 5 133.572578 138.152575 0.975621 4.915443 6 182.542949 85.266814 2.936991 6.869463 7 118.912106 152.846543 3.915805 1.941763 8 71.129964 190.927166 1.928579 13.630508 9 0.957928 272.766358 0.973771 2.91816 10 247.48044 6.758236 9.728949 13.648592 11 32.130469 234.68241 7.865718 2.93762 12 31.992572 241.719698 0 3.903947 13 26.32765 239.596153 0 11.692414 14 72.98442 190.957257 7.82806 5.84648 15 18.437261 252.376801 3.853395 2.94876 16 108.303846 101.04052 7.804664 60.467187 17 42.821348 182.893527 25.382002 26.51934 18 80.859677 181.202079 5.810111 9.74435 19 7.699796 221.944316 46.997056 0.975049 20 56.522138 157.763428 51.683117 11.647534