NonredundantMotifs:70

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known70
• db :SWISSREGULON
• Id :EBF1.p2
• name  :
• score :0.893570516768295
  
• External refs:

• Internal refs:

Motif matrix

P0 A C G T 1 35.736564 43.346026 31.927726 21.224408 2 40.319537 25.097355 48.676 18.141832 3 19.653445 69.263047 29.079804 14.238428 4 70.056897 0.938204 36.675475 24.564148 5 68.753828 8.494474 39.928708 15.057714 6 1.830617 65.164424 35.83389 29.405793 7 0 2.885366 1.829134 127.520224 8 1.886979 119.265036 3.616792 7.465917 9 0 130.390775 0 1.843949 10 0 113.360071 0 18.874653 11 29.86381 70.231678 0 32.139236 12 60.782575 10.508074 48.745422 12.198653 13 30.473341 0.902129 99.003523 1.855731 14 52.429385 0 76.90704 2.898299 15 0.972895 0.908878 130.352951 0 16 82.413608 9.26798 32.023964 8.529172 17 51.490577 32.26245 47.509697 0.972 18 9.533474 53.999977 32.92053 35.780743 19 32.68526 19.73632 53.784695 26.028449 20 3.69832 29.716713 54.18171 44.637981 21 28.019157 10.473004 91.854299 1.888264 22 18.868819 38.889143 31.993486 42.483276