FFCP PHASE1:Mm9::chr3:54916299..54916327,+
From FANTOM5_SSTAR
Short description: | p3@Spg20 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Spg20_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 0bp_to_ENSMUST00000117341_5end |
EntrezGene: | Spg20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@Spg20 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic cell | 9.02e-12 | 70 |
muscle precursor cell | 7.59e-11 | 6 |
muscle cell | 7.59e-11 | 6 |
myoblast | 7.59e-11 | 6 |
mesodermal cell | 3.10e-09 | 7 |
cardiocyte | 6.79e-09 | 3 |
striated muscle cell | 6.79e-09 | 3 |
cardiac muscle cell | 6.79e-09 | 3 |
cardiac muscle myoblast | 6.79e-09 | 3 |
raphe nuclei neuron | 6.17e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 6.17e-08 | 3 |
reticular formation | 6.17e-08 | 3 |
skeletal muscle tissue | 4.39e-07 | 9 |
striated muscle tissue | 4.39e-07 | 9 |
muscle tissue | 4.39e-07 | 9 |
multilaminar epithelium | 4.39e-07 | 9 |
epithelial vesicle | 4.39e-07 | 9 |
musculature | 4.39e-07 | 9 |
somite | 4.39e-07 | 9 |
myotome | 4.39e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.