Personal tools

FFCP PHASE1:Mm9::chr11:97883908..97883985,-

From FANTOM5_SSTAR

Revision as of 13:47, 13 November 2012 by Autoedit (talk | contribs)
Jump to: navigation, search
Short description:p1@Cacnb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cacnb1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000017552, ENSMUST00000092736, ENSMUST00000103144, ENSMUST00000107562, ENSMUST00000168380, NM_001159319, NM_031173, NM_145121, uc007lff.2, uc007lfh.2, uc007lfi.2, uc011ydz.1_5end
EntrezGene:Cacnb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cacnb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C337.02
Mouse Granule cells, donor2.CNhs12357.11731-123E340.20
Mouse Granule cells, donor3.CNhs12108.11636-122C738.03
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.52
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.82
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.11
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F455.90
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.77
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H912.43
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D611.27
adrenal gland, embryo E17.CNhs11043.1263-45I19.22
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F571.50
bone (os femoris), neonate N16.CNhs11225.1525-43A616.56
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A437.30
corpus striatum, adult.CNhs10487.19-21D8100.19
corpus striatum, neonate N00.CNhs11226.630-43F148.13
cortex, adult.CNhs10473.12-14D586.22
cortex, neonate N30.CNhs11107.1392-42F288.73
diencephalon, adult.CNhs10482.20-12F236.16
diencephalon, neonate N30.CNhs11201.1388-42B255.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D418.24
eyeball, neonate N00.CNhs11207.633-15C615.24
eyeball, neonate N01.CNhs11140.1532-43E713.32
eyeball, neonate N02.CNhs11205.1551-44G813.02
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H211.35
forelimb, embryo E13.CNhs10589.384-1E211.61
forelimb, embryo E14.CNhs10577.413-26A819.07
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C426.12
forelimb, embryo E18.CNhs11008.1520-43B510.70
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G14.05
heart, neonate N20.CNhs11127.821-26I65.12
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E870.24
hippocampus, neonate N00.CNhs11228.627-43G134.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D86.31
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F89.25
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G77.22
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C221.67
medulla oblongata, neonate N30.CNhs11200.1396-42A321.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C239.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I948.20
ovary, adult.CNhs10507.91-2I76.67
ovary, embryo E18.CNhs11040.505-44H713.35
ovary, neonate N00.CNhs11217.1299-22I411.89
oviduct, adult pregnant day01.CNhs10500.988-6G614.02
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G418.57
skin, neonate N03.CNhs11215.662-22H312.36
skin, neonate N06.CNhs11097.693-20I58.12
skin, neonate N10.CNhs11108.762-6C46.07
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C924.11
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E39.02
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D46.16
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G548.48
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E231.97
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C77.83
thymus, neonate N06.CNhs11197.681-26C48.48
thymus, neonate N07.CNhs11211.713-19D36.17
thymus, neonate N10.CNhs11194.748-24E49.38
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G710.29
thymus, neonate N30.CNhs11132.1393-42G212.86
tongue, adult.CNhs10499.32-1B424.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A178.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A275.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A380.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D764.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A481.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A572.52
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A673.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A780.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A880.21
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A984.39
whole body, embryo E11.CNhs11014.324-5I88.72
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H216.56
whole body, embryo E14.5.CNhs10578.420-27D219.45
whole body, embryo E14.CNhs10519.395-14B118.03
whole body, embryo E16.CNhs10514.453-14F230.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G538.32
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.47
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G543.72
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G540.05
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G543.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G538.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G543.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G540.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G534.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G543.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G544.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G536.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G530.52
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G540.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G536.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G538.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G537.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G543.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G541.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G541.33
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G540.13
whole body, embryo E17.5.CNhs10513.490-9F932.99
whole body, embryo E17.CNhs10517.475-3I555.21
whole body, embryo E18.CNhs10516.493-3B340.70
whole body, neonate N00.CNhs10525.657-19C234.81
whole body, neonate N01.CNhs10576.659-23C654.71
whole body, neonate N06.CNhs10515.692-21D149.85
whole body, neonate N10.CNhs10518.761-6B446.61





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.20e-0923
neuroblast (sensu Vertebrata)5.20e-0923
neuron2.17e-0833
neuronal stem cell2.17e-0833
neuroblast2.17e-0833
electrically signaling cell2.17e-0833
electrically responsive cell4.58e-0739
electrically active cell4.58e-0739

Uber anatomy
Ontology termp-valuen
central nervous system5.05e-1773
neurectoderm1.99e-1664
neural plate1.99e-1664
presumptive neural plate1.99e-1664
regional part of nervous system3.83e-1654
nervous system9.49e-1675
ectoderm-derived structure1.55e-1595
ectoderm1.55e-1595
presumptive ectoderm1.55e-1595
neural tube1.91e-1552
neural rod1.91e-1552
future spinal cord1.91e-1552
neural keel1.91e-1552
ecto-epithelium2.02e-1573
gray matter3.25e-1534
pre-chordal neural plate3.69e-1449
brain9.42e-1447
future brain9.42e-1447
anterior neural tube1.50e-1340
brain grey matter2.51e-1329
regional part of telencephalon2.51e-1329
telencephalon2.51e-1329
regional part of brain3.40e-1346
regional part of forebrain3.93e-1339
forebrain3.93e-1339
future forebrain3.93e-1339
structure with developmental contribution from neural crest5.65e-1192
cerebral cortex1.73e-0921
cerebral hemisphere1.73e-0921
pallium1.73e-0921
regional part of cerebral cortex3.82e-0817
occipital lobe5.29e-0810
visual cortex5.29e-0810
neocortex5.29e-0810







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:97883908..97883985,-&oldid=2257812"