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MCL coexpression mm9:53

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:129717274..129717298,-p1@Neurod4
Mm9::chr10:129717308..129717319,-p2@Neurod4
Mm9::chr10:44180766..44180773,-p@chr10:44180766..44180773
-
Mm9::chr10:44184001..44184021,-p@chr10:44184001..44184021
-
Mm9::chr10:44188645..44188654,+p@chr10:44188645..44188654
+
Mm9::chr10:44190515..44190527,-p@chr10:44190515..44190527
-
Mm9::chr10:44195793..44195802,+p@chr10:44195793..44195802
+
Mm9::chr10:73284605..73284619,+p1@Pcdh15
Mm9::chr10:77770114..77770138,-p10@Agpat3
Mm9::chr11:100512025..100512063,-p2@Zfp385c
Mm9::chr11:113658786..113658790,-p@chr11:113658786..113658790
-
Mm9::chr11:114641803..114641811,+p@chr11:114641803..114641811
+
Mm9::chr11:43124561..43124572,-p2@ENSMUST00000144024
Mm9::chr11:43124612..43124613,-p3@ENSMUST00000144024
Mm9::chr11:43124637..43124647,-p1@ENSMUST00000144024
Mm9::chr11:71949490..71949511,-p7@Pitpnm3
Mm9::chr11:77532228..77532251,+p@chr11:77532228..77532251
+
Mm9::chr11:95705118..95705137,+p8@Gngt2
Mm9::chr11:95705150..95705170,+p3@Gngt2
Mm9::chr11:95705180..95705189,+p17@Gngt2
Mm9::chr11:99999082..99999101,-p@chr11:99999082..99999101
-
Mm9::chr12:15822378..15822389,-p@chr12:15822378..15822389
-
Mm9::chr12:15822402..15822419,-p@chr12:15822402..15822419
-
Mm9::chr12:5815070..5815110,+p2@uc007myy.1
p2@uc007myz.1
Mm9::chr12:73279727..73279739,-p@chr12:73279727..73279739
-
Mm9::chr12:74046430..74046453,-p@chr12:74046430..74046453
-
Mm9::chr12:85887105..85887144,-p@chr12:85887105..85887144
-
Mm9::chr13:37861800..37861804,-p@chr13:37861800..37861804
-
Mm9::chr13:81684267..81684272,-p@chr13:81684267..81684272
-
Mm9::chr13:81772118..81772152,-p1@Gpr98
Mm9::chr13:98614728..98614737,+p@chr13:98614728..98614737
+
Mm9::chr14:101018573..101018580,-p@chr14:101018573..101018580
-
Mm9::chr14:49200296..49200300,+p@chr14:49200296..49200300
+
Mm9::chr14:49282415..49282426,-p4@Otx2
Mm9::chr14:49284773..49284790,-p2@Otx2
Mm9::chr14:49287107..49287125,-p3@Otx2
Mm9::chr14:49287186..49287225,-p1@Otx2
Mm9::chr14:49287326..49287328,+p@chr14:49287326..49287328
+
Mm9::chr14:57676404..57676426,-p2@Gja3
Mm9::chr14:57677052..57677058,+p@chr14:57677052..57677058
+
Mm9::chr14:58655443..58655454,+p@chr14:58655443..58655454
+
Mm9::chr14:58655501..58655506,+p@chr14:58655501..58655506
+
Mm9::chr14:58655515..58655530,+p@chr14:58655515..58655530
+
Mm9::chr14:60996420..60996431,+p@chr14:60996420..60996431
+
Mm9::chr14:60996440..60996447,+p@chr14:60996440..60996447
+
Mm9::chr15:36655026..36655032,+p@chr15:36655026..36655032
+
Mm9::chr15:37902441..37902448,-p@chr15:37902441..37902448
-
Mm9::chr15:73787551..73787588,+p@chr15:73787551..73787588
+
Mm9::chr15:75445547..75445560,+p@chr15:75445547..75445560
+
Mm9::chr15:75445590..75445596,+p@chr15:75445590..75445596
+
Mm9::chr15:79788821..79788836,-p@chr15:79788821..79788836
-
Mm9::chr15:79788839..79788856,-p@chr15:79788839..79788856
-
Mm9::chr15:84276483..84276494,+p@chr15:84276483..84276494
+
Mm9::chr15:84313273..84313295,-p@chr15:84313273..84313295
-
Mm9::chr16:21743134..21743139,-p@chr16:21743134..21743139
-
Mm9::chr16:57352926..57352938,+p8@Filip1l
Mm9::chr17:15868934..15868947,+p@chr17:15868934..15868947
+
Mm9::chr17:29817472..29817483,+p8@Ftsjd2
Mm9::chr17:30734819..30734830,-p@chr17:30734819..30734830
-
Mm9::chr17:48015645..48015689,-p9@Foxp4
Mm9::chr17:55585536..55585555,+p4@St6gal2
Mm9::chr17:80405604..80405609,-p@chr17:80405604..80405609
-
Mm9::chr18:35813995..35814003,-p@chr18:35813995..35814003
-
Mm9::chr18:55148492..55148507,-p@chr18:55148492..55148507
-
Mm9::chr18:55699408..55699420,+p@chr18:55699408..55699420
+
Mm9::chr18:66179613..66179645,-p5@Lman1
Mm9::chr18:72362248..72362252,-p@chr18:72362248..72362252
-
Mm9::chr18:84890263..84890281,+p2@Fam69c
Mm9::chr18:84890533..84890538,+p@chr18:84890533..84890538
+
Mm9::chr19:19010644..19010646,-p@chr19:19010644..19010646
-
Mm9::chr19:19010867..19010874,-p@chr19:19010867..19010874
-
Mm9::chr19:19010881..19010918,-p@chr19:19010881..19010918
-
Mm9::chr19:19011103..19011115,-p@chr19:19011103..19011115
-
Mm9::chr19:19011181..19011199,-p@chr19:19011181..19011199
-
Mm9::chr19:19106733..19106739,-p@chr19:19106733..19106739
-
Mm9::chr19:19125441..19125444,-p@chr19:19125441..19125444
-
Mm9::chr19:19153566..19153581,-p@chr19:19153566..19153581
-
Mm9::chr19:19154032..19154035,-p@chr19:19154032..19154035
-
Mm9::chr19:19174263..19174267,-p@chr19:19174263..19174267
-
Mm9::chr19:19174760..19174763,-p@chr19:19174760..19174763
-
Mm9::chr19:19185671..19185693,-p1@Rorb
Mm9::chr19:20084629..20084638,-p2@uc008gyh.1
Mm9::chr19:20191153..20191156,-p@chr19:20191153..20191156
-
Mm9::chr19:20198357..20198364,-p@chr19:20198357..20198364
-
Mm9::chr19:20198380..20198398,-p@chr19:20198380..20198398
-
Mm9::chr19:20198400..20198409,-p@chr19:20198400..20198409
-
Mm9::chr19:50647664..50647668,-p@chr19:50647664..50647668
-
Mm9::chr19:56500246..56500261,+p@chr19:56500246..56500261
+
Mm9::chr1:134263646..134263661,-p9@Tmcc2
Mm9::chr1:141111379..141111382,-p@chr1:141111379..141111382
-
Mm9::chr1:141201344..141201351,-p@chr1:141201344..141201351
-
Mm9::chr1:141273546..141273560,-p5@Crb1
Mm9::chr1:141273596..141273611,-p3@Crb1
Mm9::chr1:141273624..141273655,-p1@Crb1
Mm9::chr1:141273671..141273687,-p4@Crb1
Mm9::chr1:157589131..157589176,-p1@Lhx4
Mm9::chr1:157589255..157589266,-p2@Lhx4
Mm9::chr1:157589639..157589645,+p@chr1:157589639..157589645
+
Mm9::chr1:187265594..187265614,-p1@9630028B13Rik
Mm9::chr1:187265620..187265640,-p2@9630028B13Rik
Mm9::chr1:44608593..44608603,+p7@Gulp1
Mm9::chr1:65095132..65095134,+p@chr1:65095132..65095134
+
Mm9::chr1:65108757..65108768,-p@chr1:65108757..65108768
-
Mm9::chr1:65126802..65126820,+p@chr1:65126802..65126820
+
Mm9::chr1:9675616..9675620,-p@chr1:9675616..9675620
-
Mm9::chr1:9690398..9690410,-p2@Mybl1
Mm9::chr2:105523171..105523175,+p24@Pax6
Mm9::chr2:132550027..132550036,+p@chr2:132550027..132550036
+
Mm9::chr2:154242199..154242202,-p@chr2:154242199..154242202
-
Mm9::chr2:154247044..154247056,-p@chr2:154247044..154247056
-
Mm9::chr2:158435337..158435348,+p@chr2:158435337..158435348
+
Mm9::chr2:163031389..163031394,+p@chr2:163031389..163031394
+
Mm9::chr2:173094940..173094948,-p@chr2:173094940..173094948
-
Mm9::chr2:29108331..29108346,-p5@6530402F18Rik
Mm9::chr2:29108347..29108352,-p13@6530402F18Rik
Mm9::chr2:29108357..29108372,-p4@6530402F18Rik
Mm9::chr2:32678693..32678720,-p@chr2:32678693..32678720
-
Mm9::chr2:38021610..38021640,-p4@Dennd1a
Mm9::chr2:4221583..4221614,+p16@Frmd4a
Mm9::chr2:4221636..4221645,+p46@Frmd4a
Mm9::chr2:4221650..4221663,+p26@Frmd4a
Mm9::chr2:4221669..4221681,+p35@Frmd4a
Mm9::chr2:51893505..51893521,+p4@Tnfaip6
Mm9::chr2:51893525..51893540,+p3@Tnfaip6
Mm9::chr2:79249757..79249759,-p@chr2:79249757..79249759
-
Mm9::chr2:79295122..79295129,-p@chr2:79295122..79295129
-
Mm9::chr2:79295178..79295188,-p@chr2:79295178..79295188
-
Mm9::chr2:93906859..93906868,-p3@Hsd17b12
Mm9::chr2:93906904..93906912,-p5@Hsd17b12
Mm9::chr3:121876656..121876674,+p@chr3:121876656..121876674
+
Mm9::chr3:129525343..129525350,-p@chr3:129525343..129525350
-
Mm9::chr3:129525389..129525400,-p@chr3:129525389..129525400
-
Mm9::chr3:129525405..129525428,-p1@Rrh
Mm9::chr3:17227906..17227926,-p@chr3:17227906..17227926
-
Mm9::chr3:17303172..17303175,-p@chr3:17303172..17303175
-
Mm9::chr3:17614648..17614652,-p@chr3:17614648..17614652
-
Mm9::chr3:17661249..17661267,-p@chr3:17661249..17661267
-
Mm9::chr3:17685607..17685616,-p@chr3:17685607..17685616
-
Mm9::chr3:26052563..26052579,-p10@Nlgn1
Mm9::chr3:26220574..26220578,-p@chr3:26220574..26220578
-
Mm9::chr3:58425133..58425136,-p@chr3:58425133..58425136
-
Mm9::chr3:96503225..96503227,+p@chr3:96503225..96503227
+
Mm9::chr4:106799222..106799227,+p4@ENSMUST00000145510
p4@uc008tzg.1
Mm9::chr4:106799277..106799294,+p1@ENSMUST00000145510
p1@uc008tzg.1
Mm9::chr4:106799303..106799321,+p2@ENSMUST00000145510
p2@uc008tzg.1
Mm9::chr4:106799632..106799635,+p@chr4:106799632..106799635
+
Mm9::chr4:106800550..106800554,+p@chr4:106800550..106800554
+
Mm9::chr4:106807736..106807740,+p@chr4:106807736..106807740
+
Mm9::chr4:107641207..107641250,+p@chr4:107641207..107641250
+
Mm9::chr4:117701804..117701843,-p@chr4:117701804..117701843
-
Mm9::chr4:133524064..133524068,+p@chr4:133524064..133524068
+
Mm9::chr4:133524526..133524536,-p11@Hmgn2-ps1
p12@Gm10282
p12@Gm6594
p12@Gm6750
p12@Gm7931
p12@Gm9525
p12@Hmgn2
Mm9::chr4:136465750..136465765,+p@chr4:136465750..136465765
+
Mm9::chr4:136465766..136465773,+p@chr4:136465766..136465773
+
Mm9::chr4:136501530..136501533,+p@chr4:136501530..136501533
+
Mm9::chr4:136501539..136501549,+p@chr4:136501539..136501549
+
Mm9::chr4:136501555..136501581,+p@chr4:136501555..136501581
+
Mm9::chr4:136501594..136501609,+p@chr4:136501594..136501609
+
Mm9::chr4:136501616..136501621,+p@chr4:136501616..136501621
+
Mm9::chr4:136508940..136508946,+p@chr4:136508940..136508946
+
Mm9::chr4:136512486..136512493,-p@chr4:136512486..136512493
-
Mm9::chr4:148315176..148315190,+p@chr4:148315176..148315190
+
Mm9::chr4:149123540..149123549,-p@chr4:149123540..149123549
-
Mm9::chr4:149123561..149123574,-p@chr4:149123561..149123574
-
Mm9::chr4:151505442..151505445,-p18@Espn
Mm9::chr4:151505519..151505529,-p15@Espn
Mm9::chr4:151506454..151506470,-p14@Espn
Mm9::chr4:151506506..151506524,-p8@Espn
Mm9::chr4:151862414..151862441,+p6@Nphp4
Mm9::chr4:153068355..153068367,+p@chr4:153068355..153068367
+
Mm9::chr4:19208009..19208054,+p1@Cngb3
Mm9::chr4:19208057..19208066,+p3@Cngb3
Mm9::chr4:19208067..19208078,+p2@Cngb3
Mm9::chr4:21612929..21612952,-p1@Prdm13
Mm9::chr4:41581884..41581932,+p@chr4:41581884..41581932
+
Mm9::chr4:41678256..41678295,-p1@Arid3c
Mm9::chr4:82207594..82207596,-p@chr4:82207594..82207596
-
Mm9::chr4:82333725..82333726,-p@chr4:82333725..82333726
-
Mm9::chr4:82351527..82351541,-p16@Nfib
Mm9::chr4:82351544..82351563,-p15@Nfib
Mm9::chr4:82351566..82351607,-p10@Nfib
Mm9::chr4:97251354..97251368,-p2@ENSMUST00000147925
Mm9::chr4:99656517..99656527,+p@chr4:99656517..99656527
+
Mm9::chr4:99656590..99656616,+p@chr4:99656590..99656616
+
Mm9::chr5:100151001..100151005,-p@chr5:100151001..100151005
-
Mm9::chr5:100157820..100157831,-p2@ENSMUST00000160803
Mm9::chr5:100157875..100157901,-p1@ENSMUST00000160803
Mm9::chr5:114724254..114724278,-p4@Foxn4
Mm9::chr5:115879705..115879716,+p8@Msi1
Mm9::chr5:115881368..115881391,+p@chr5:115881368..115881391
+
Mm9::chr5:115884983..115884995,+p28@Msi1
Mm9::chr5:115885009..115885038,+p11@Msi1
Mm9::chr5:115885049..115885073,+p19@Msi1
Mm9::chr5:115885085..115885098,+p21@Msi1
Mm9::chr5:115885103..115885114,+p23@Msi1
Mm9::chr5:115885136..115885153,+p25@Msi1
Mm9::chr5:115885425..115885444,+p4@Msi1
Mm9::chr5:115885454..115885461,+p24@Msi1
Mm9::chr5:116995054..116995064,-p@chr5:116995054..116995064
-
Mm9::chr5:121185018..121185063,+p@chr5:121185018..121185063
+
Mm9::chr5:123752411..123752420,+p7@Wdr66
Mm9::chr5:123752422..123752435,+p4@Wdr66
Mm9::chr5:123752506..123752517,+p3@Wdr66
Mm9::chr5:123760358..123760369,-p1@ENSMUST00000133476
Mm9::chr5:123760508..123760531,+p@chr5:123760508..123760531
+
Mm9::chr5:123760542..123760553,+p@chr5:123760542..123760553
+
Mm9::chr5:134266664..134266676,-p@chr5:134266664..134266676
-
Mm9::chr5:134266678..134266685,-p@chr5:134266678..134266685
-
Mm9::chr5:134266714..134266721,-p@chr5:134266714..134266721
-
Mm9::chr5:35738305..35738311,+p@chr5:35738305..35738311
+
Mm9::chr5:35742664..35742672,-p@chr5:35742664..35742672
-
Mm9::chr5:38891401..38891407,+p@chr5:38891401..38891407
+
Mm9::chr5:46398781..46398796,-p@chr5:46398781..46398796
-
Mm9::chr5:46398809..46398820,-p@chr5:46398809..46398820
-
Mm9::chr5:46398830..46398841,-p@chr5:46398830..46398841
-
Mm9::chr5:4779936..4779937,-p@chr5:4779936..4779937
-
Mm9::chr5:66728864..66728885,-p5@Apbb2
Mm9::chr6:124790076..124790087,-p4@Gnb3
Mm9::chr6:124790210..124790223,-p2@Gnb3
Mm9::chr6:126485015..126485052,-p@chr6:126485015..126485052
-
Mm9::chr6:134742488..134742497,-p16@Dusp16
Mm9::chr6:144996125..144996134,-p20@Bcat1
Mm9::chr6:144997058..144997068,+p@chr6:144997058..144997068
+
Mm9::chr6:29330517..29330520,-p6@Opn1sw
Mm9::chr6:29348920..29348931,+p4@Ccdc136
Mm9::chr6:29348959..29348966,+p6@Ccdc136
Mm9::chr6:30097094..30097108,-p@chr6:30097094..30097108
-
Mm9::chr6:30107565..30107569,-p@chr6:30107565..30107569
-
Mm9::chr6:30124100..30124109,-p@chr6:30124100..30124109
-
Mm9::chr6:30124117..30124136,-p@chr6:30124117..30124136
-
Mm9::chr6:30126481..30126485,+p1@BB283400
Mm9::chr6:96065908..96065912,-p@chr6:96065908..96065912
-
Mm9::chr7:106124484..106124507,-p@chr7:106124484..106124507
-
Mm9::chr7:108311543..108311551,+p@chr7:108311543..108311551
+
Mm9::chr7:119283904..119283915,-p@chr7:119283904..119283915
-
Mm9::chr7:133725277..133725290,-p@chr7:133725277..133725290
-
Mm9::chr7:135458294..135458313,+p@chr7:135458294..135458313
+
Mm9::chr7:139912327..139912347,-p@chr7:139912327..139912347
-
Mm9::chr7:139912393..139912395,-p@chr7:139912393..139912395
-
Mm9::chr7:140951820..140951854,-p7@Dhx32
Mm9::chr7:146516701..146516707,+p@chr7:146516701..146516707
+
Mm9::chr7:146533663..146533678,+p@chr7:146533663..146533678
+
Mm9::chr7:149558646..149558680,-p5@6330512M04Rik
Mm9::chr7:16471513..16471522,+p@chr7:16471513..16471522
+
Mm9::chr7:17478458..17478472,+p@chr7:17478458..17478472
+
Mm9::chr7:28041498..28041523,+p@chr7:28041498..28041523
+
Mm9::chr7:29095406..29095436,-p@chr7:29095406..29095436
-
Mm9::chr7:38208067..38208071,-p@chr7:38208067..38208071
-
Mm9::chr7:38555336..38555360,-p@chr7:38555336..38555360
-
Mm9::chr7:56415792..56415804,+p@chr7:56415792..56415804
+
Mm9::chr7:56415878..56415890,+p@chr7:56415878..56415890
+
Mm9::chr7:56416069..56416082,+p@chr7:56416069..56416082
+
Mm9::chr7:56416086..56416093,+p@chr7:56416086..56416093
+
Mm9::chr7:56416097..56416138,+p@chr7:56416097..56416138
+
Mm9::chr7:56416146..56416158,+p@chr7:56416146..56416158
+
Mm9::chr8:123012391..123012410,+p8@Gse1
Mm9::chr9:106216669..106216673,-p@chr9:106216669..106216673
-
Mm9::chr9:107964319..107964338,-p11@Rnf123
Mm9::chr9:110147424..110147448,+p@chr9:110147424..110147448
+
Mm9::chr9:110147453..110147468,+p@chr9:110147453..110147468
+
Mm9::chr9:123760159..123760194,+p@chr9:123760159..123760194
+
Mm9::chr9:30928447..30928454,-p@chr9:30928447..30928454
-
Mm9::chr9:59797847..59797858,-p5@Nr2e3
Mm9::chr9:82908462..82908471,+p@chr9:82908462..82908471
+
Mm9::chr9:83006179..83006201,-p6@Hmgn3
Mm9::chr9:83006202..83006225,-p5@Hmgn3
Mm9::chr9:83507551..83507555,-p@chr9:83507551..83507555
-
Mm9::chr9:83558570..83558573,+p@chr9:83558570..83558573
+
Mm9::chrX:166365481..166365521,+p10@Mid1
Mm9::chrX:34718174..34718176,+p@chrX:34718174..34718176
+
Mm9::chrX:34719593..34719602,+p@chrX:34719593..34719602
+
Mm9::chrX:34730435..34730439,+p@chrX:34730435..34730439
+
Mm9::chrX:80288440..80288464,+p20@Dmd
Mm9::chrX:80288558..80288565,+p23@Dmd
Mm9::chrX:80288567..80288579,+p11@Dmd
Mm9::chrX:80288631..80288645,+p19@Dmd


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data




Relative expression of the co-expression cluster over median <br>Analyst:



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Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>


Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs




JASPAR motifs


Motifs-log10(p-value)

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