MacroAPE 1083:8-GAATGAAAGCG
From FANTOM5_SSTAR
Full Name: 8-GAATGAAAGCG,CNhs12321,BestGuess:IRF4(IRF)/GM12878-IRF4-ChIP-Seq/Homer(0.729435679472577),T:625.0(14.99%),B:4228.3(9.60%),P:1e-27
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| Dof3#MA0021.1 | -5 | 0.00291609 | 1.38806 | 1 | 6 | GAATGAAAGCG | AAAGCG | + |
| MNB1A#MA0053.1 | -5 | 0.00325778 | 1.5507 | 1 | 5 | GAATGAAAGCG | AAAGC | + |
| PBF#MA0064.1 | -5 | 0.00419792 | 1.99821 | 1 | 5 | GAATGAAAGCG | AAAGC | + |
| Dof2#MA0020.1 | -5 | 0.00763833 | 3.63584 | 1 | 6 | GAATGAAAGCG | AAAGCA | + |
| IRF2#MA0051.1 | 3 | 0.00853683 | 4.06353 | 1 | 11 | GAATGAAAGCG | GGAAAGCGAAACCAAAAC | + |
| IRF1#MA0050.1 | 2 | 0.00994415 | 4.73342 | 1 | 10 | GAATGAAAGCG | GAAAGCGAAACC | + |
| STAT1#MA0137.1 | 3 | 0.0115579 | 5.50157 | 1 | 11 | GAATGAAAGCG | GGAAAACGAAACTG | + |
| achi#MA0207.1 | -3 | 0.0136761 | 6.50984 | 1 | 6 | GAATGAAAGCG | TGACAG | + |
| HAP5#MA0316.1 | 2 | 0.0143146 | 6.81377 | 1 | 11 | GAATGAAAGCG | ACCAATCAGATCCCA | - |
| GCR2#MA0305.1 | -3 | 0.0144968 | 6.90047 | 1 | 7 | GAATGAAAGCG | AGGAAGC | - |
| hth#MA0227.1 | -3 | 0.0150427 | 7.16031 | 1 | 6 | GAATGAAAGCG | TGACAG | + |
| Ddit3::Cebpa#MA0019.1 | 0 | 0.0170519 | 8.11672 | 1 | 11 | GAATGAAAGCG | AGATGCAATCCC | + |
| vis#MA0252.1 | -3 | 0.019144 | 9.11254 | 1 | 6 | GAATGAAAGCG | TGACAG | + |
