Personal tools

MacroAPE 1083:CNhs13099 bl f0

From FANTOM5_SSTAR

Revision as of 14:29, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CNhs13099_bl_f0

Motif matrix
POACGT
1238.27001707321034117.1228255163242176.965773075319734.480545548306159
2276.0945310534613736.1493178425433381.0681714038137843.52714091334205
398.5328018623549985.84959852954121173.6344281594813678.82233266178302
4191.43268480223625111.938624136590425.829041302933288127.63881097140052
5370.260791005618962.54442730523328465.88700242320357758.146940479104465
6146.635367315015970.4422850381654344283.055486779263566.706022080715314
719.472456986136496412.754666789723963.82730485737310260.7847325799269156
8425.292543227848972.6370842904180621.11294318657409577.796590508319064
98.087340114952291.532698442606722424.171956180420243.047166475180839
1088.9413118381008936.867482302709884.40832883979115226.62203823255865
11123.54298475646951109.19042205527737178.0619750700661526.043779331347494

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ovo#MA0126.1-10.001055270.5023060.5023069AAGAAGCAGTGAGTAACAGT+
prd#MA0239.1-10.001055270.5023060.5023069AAGAAGCAGTGAGTAACAGT+
PEND#MA0127.100.001949870.9281380.61875810AAGAAGCAGTGAATAAGAAGT-
SOK2#MA0385.1-10.00648063.08477110AAGAAGCAGTGACCTGCAGGCA+
Foxd3#MA0041.110.007711163.67051111AAGAAGCAGTGAAACAAACATTC-
PHD1#MA0355.1-10.009124354.34319110AAGAAGCAGTGACCTGCAGCA+
Foxq1#MA0040.100.01116725.3156111AAGAAGCAGTGAATAAACAATA-
odd#MA0454.120.01177135.6031419AAGAAGCAGTGAACAGTAGCAG+
Myf#MA0055.100.01385746.59613111AAGAAGCAGTGCAGCAGCTGCTG+