Personal tools

MacroAPE 1083:7-GCWGCATT

From FANTOM5_SSTAR

Revision as of 12:43, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: 7-GCWGCATT,CNhs10647,BestGuess:TEAD3_si_HM09(0.646559830684259),T:1335.0(33.51%),B:10900.0(24.70%),P:1e-35

Motif matrix
POACGT
11.3351.3351330.9951.335
21.3351330.9951.3351.335
3710.221.3351.335622.11
41.3351.3351021.275311.055
5105.465779.64218.94230.955
6818.3551.3351.335513.975
7509.971.33514.685809.01
81.335148.1851.3351184.145

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

mab-3#MA0262.150.009230064.3935118GCAGCATTAATTCGCAACATT-
Pax6#MA0069.150.009441554.4941818GCAGCATTTTCACGCATGAGTT+