Personal tools

MacroAPE 1083:Motif TGTNAC

From FANTOM5_SSTAR

Revision as of 14:50, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif_TGTNAC

Motif matrix
POACGT
010009088
020090880
030009088
042272227222722272
059088000
060908800

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

caup#MA0217.100.003373191.6056415TGTAACTGTTA-
Spz1#MA0111.120.004324762.0585916TGTAACGCTGTTACCCT-
Six4#MA0204.100.007701093.6657216TGTAACTGATAC+
ara#MA0210.100.009679764.6075715TGTAACTGTTA-
mirr#MA0233.100.01048164.9892315TGTAACTGTTT-
ovo#MA0126.120.01111385.2901516TGTAACACTGTTACT-
prd#MA0239.120.01111385.2901516TGTAACACTGTTACT-
NFIL3#MA0025.130.01169765.5680716TGTAACTTATGTAACGT+
Pax2#MA0067.100.0169968.0900916TGTAACAGTCACGG+
CG11617#MA0173.110.01773648.4425216TGTAACATGTTAA-
achi#MA0207.110.0194219.244415TGTAACCTGTCA-
vis#MA0252.110.0194219.244415TGTAACCTGTCA-