Personal tools

FFCP PHASE1:Mm9::chr8:3515378..3515397,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:3515378..3515397,+
|short_description=p3@Pnpla6
|description=CAGE_peak_3_at_Pnpla6_5end
|association_with_transcript=0bp_to_ENSMUST00000004681,ENSMUST00000111070,NM_001122818,NM_015801,uc009krr.1,uc009krs.1,uc012fyk.1_5end
|EntrezGene=50767
|EntrezGene=50767
|HGNC=
|HGNC=
|UniProt=Q3TRM4
|UniProt=Q3TRM4
|association_with_transcript=0bp_to_ENSMUST00000004681,ENSMUST00000111070,NM_001122818,NM_015801,uc009krr.1,uc009krs.1,uc012fyk.1_5end
|description=CAGE_peak_3_at_Pnpla6_5end
|id=chr8:3515378..3515397,+
|ontology_enrichment_disease=
|phase1_expression=1.12104192973356,3.48975407639361,5.91499011206397,6.95667686005709,3.00537437967808,3.02182689441402,3.27057696833736,0.774739940649458,0.281577444303333,0.234064526321993,0.171217968225505,0.558405112967355,0.856003649656029,0.611942816932982,0.666219523631325,0.404950534779652,2.79824751251259,1.26184866143295,0.548457734422955,1.27316895539409,1.36069264241712,0.595745707205312,1.04479915655574,2.87986361028132,2.98232065387321,2.29692785646008,0.86152399231815,1.29282739611533,4.18051522804023,3.2763916868791,3.54768817048488,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,2.09265815368454,0,0.523523743973798,0.588231488031014,0,0.971020706062307,1.51076181570693,1.11514624341466,1.28482726513177,1.56478268869608,1.74420125104357,2.85592037554813,3.30530828426282,1.95980990275508,0,0.335565212115473,0.725362142011344,0.336093799142464,1.54355661621568,0.286533439938757,2.06268836910977,3.03474691289397,3.70293685490423,0.633831403506179,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,3.29560121570245,3.45796474789399,0.829516898467821,1.4850653216486,0.841299845405528,1.14260393761521,2.87129103237098,0.61245399607477,1.0543001812006,2.75765635983006,1.10115880999389,3.06449611404451,4.91540906419979,2.37395317914349,2.28719109006024,1.56274011167028,3.62937898701795,2.25105044012672,5.50073691996516,2.06240009831567,1.99320353118744,1.67759501242771,1.06016670666458,1.058001841495,5.2175607966302,0,0,1.07940638327563,1.29955283489534,0.448026887097336,0.702222100658759,1.02258193546835,0.259786004602869,1.06001872353102,1.69012103732017,1.28326477414318,0,0,0.865964164044856,1.52015919285059,1.01104889002957,0.68510327831436,2.33044095282455,2.3750742250372,1.38788261412909,1.52232739156071,0.691846491768175,1.3565037649736,1.76383060703557,1.63366568728578,0.494389935468748,2.02439099687876,0.884610551949874,0.647067399789637,1.54589062922275,0.484875253135222,1.86391761218122,2.92780797011547,3.56059401582874,2.81002760729451,0.11981512450592,0.599902730993408,0.127070227073065,4.04434726393021,0.457500602818626,1.38219787324151,2.60736480288415,0.511430914660661,2.0778804455956,2.92034273521964,0.81471491080253,1.61729061793121,1.26361379216837,1.47309299120532,0.910843100738926,1.37941262660084,1.0803727788321,1.50704817835715,1.2246569847239,1.40925092313335,1.49922759295566,2.06962696591213,0.862271971731369,1.13463648100692,1.05570674498369,0.43839146485515,0.556094498451196,1.74126083261083,1.23469281844766,0.995171334092466,0,0,0.568326998791185,0.621377317606506,1.17263029990548,1.08037236876609,1.18372367792605,0.590292695242212,1.3884040159864,0.465067889500816,0.536546802799238,1.40118410840603,1.15191894939436,0.820837320395476,1.21603214318784,1.46199987425332,0.658650345873152,1.8788898626452,1.05144974282064,1.44066457330998,3.63460661282178,2.3800550999719,1.2797295032114,0.464473343720877,0.902072229254653,1.61346819698674,1.11189021922435,2.85338439168839,1.89811624617805,1.81168850196412,1.75934646160189,1.39269530428806,2.33956904542944,2.69645822596266,2.37751854862164,1.99141273254367,0.758671603812327,0.913988100877831,0,0.407302655690628,1.35766741017338,0.701358198903186,1.3279672796094,2.21415221969403,1.8839847340965,2.09775178667061,0.592905254174298,0,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.810676133875177,0,1.43768206527355,1.48856379067401,1.24815069245824,0.252578877947112,0,1.4473305640901,1.29327233116623,0.37898282354097,0.651859905768103,0.509235257325564,1.17345124144251,1.17254380209271,1.42826184531608,2.14647012643579,1.57635144106191,2.43611158613652,0.956728611944923,1.80249646187312,2.76295970985433,2.60368305446721,3.01582567878545,2.71952841909355,0.491764273019036,1.65562047782839,3.37156238974363,3.6335622843583,0,1.51482556322624,3.47059041357882,1.56175497718655,1.50796378412959,1.91175038362042,0.891194696329576,1.13230612315533,1.21443210502468,1.16902343164525,1.58115111178609,1.60660658210904,0.851640511249612,0.890328018336276,0.488660878060728,2.47455184458803,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,2.32585463851399,1.45413491791002,1.42598951353889,0.632073515871632,3.16255825724996,1.03135543248187,6.12791290356818,1.26042765821917,2.19909762430683,1.50035924522115,1.06404140185364,1.24858172321449,1.48094118541909,2.13125464380219,0.704015124191131,1.69465656691056,2.42581237860458,1.6488625294148,1.29171541356724,1.14594557363496,1.55184047204077,0.492422699235184,3.78925087618806,3.70850604021019,0.512612642393558,1.23832120777933,0.925972636848558,2.0720530270516,0.546776910884101,0.457556346413045,0.169978429993855,0.419854356970974,0.414599921413271,1.90934123603023,0.949007980743406,1.42323626988794,0.86404272657441,1.46361807210128,1.74690050996942,1.34864346384821,1.65306911450672,2.6175594198403,2.20345454596048,1.24267862617385,0,0.897099276263873,0.827292452285488,1.75006069509643,0.774958940866387,1.35164900392623,1.05621514781179,0.13020438484395,0.734015410979976,0.483168241652012,0.576060012515731,1.89606672376907,0.810900861160657,0.821687657318618,0.389762468933385,0.716106782669926,0.79472541912506,0.961563596159751,1.03382669022204,0.807731599585181,0.990688486514998,0.907435666231565,0.682205165178267,1.82802499116626,1.75315353272353,1.36038230169127,0.443971906748129,0.269141569828427,0.335769232728157,2.31827512838629,1.50145980360946,2.56412273974171,1.07184189539533,2.00628841614145,1.6942555278512,0.920650473014354,1.71868654031819,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0,0.798049746802062,0.853668028770671,0.486213434136588,0,0,1.55572709461131,0.618105171716683,0.64183841918363,1.26348605881899,1.52087579934144,1.69763707247469,1.40462261204824,0.832326981263301,1.83793500657962,0.952587382566147,0.927074607558844,0.77163688185482,2.06042950401653,1.17759136107518,0.342869252385415,1.59728225543404,1.1921809497366,1.74415699958794,1.78807822789128,0.761531471025089,0.73171189149109,1.31534855718921,1.35804113845862,0.561142271657738,1.18635018124174,0.689531376628944,1.63692417267876,0.619747364743864,1.35034627686799,2.24829520144151,0.467863216890817,1.28922632428979,0.765153328275374,0.882365676478062,0.927471342481686
|phase1_expression=1.12104192973356,3.48975407639361,5.91499011206397,6.95667686005709,3.00537437967808,3.02182689441402,3.27057696833736,0.774739940649458,0.281577444303333,0.234064526321993,0.171217968225505,0.558405112967355,0.856003649656029,0.611942816932982,0.666219523631325,0.404950534779652,2.79824751251259,1.26184866143295,0.548457734422955,1.27316895539409,1.36069264241712,0.595745707205312,1.04479915655574,2.87986361028132,2.98232065387321,2.29692785646008,0.86152399231815,1.29282739611533,4.18051522804023,3.2763916868791,3.54768817048488,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,2.09265815368454,0,0.523523743973798,0.588231488031014,0,0.971020706062307,1.51076181570693,1.11514624341466,1.28482726513177,1.56478268869608,1.74420125104357,2.85592037554813,3.30530828426282,1.95980990275508,0,0.335565212115473,0.725362142011344,0.336093799142464,1.54355661621568,0.286533439938757,2.06268836910977,3.03474691289397,3.70293685490423,0.633831403506179,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,3.29560121570245,3.45796474789399,0.829516898467821,1.4850653216486,0.841299845405528,1.14260393761521,2.87129103237098,0.61245399607477,1.0543001812006,2.75765635983006,1.10115880999389,3.06449611404451,4.91540906419979,2.37395317914349,2.28719109006024,1.56274011167028,3.62937898701795,2.25105044012672,5.50073691996516,2.06240009831567,1.99320353118744,1.67759501242771,1.06016670666458,1.058001841495,5.2175607966302,0,0,1.07940638327563,1.29955283489534,0.448026887097336,0.702222100658759,1.02258193546835,0.259786004602869,1.06001872353102,1.69012103732017,1.28326477414318,0,0,0.865964164044856,1.52015919285059,1.01104889002957,0.68510327831436,2.33044095282455,2.3750742250372,1.38788261412909,1.52232739156071,0.691846491768175,1.3565037649736,1.76383060703557,1.63366568728578,0.494389935468748,2.02439099687876,0.884610551949874,0.647067399789637,1.54589062922275,0.484875253135222,1.86391761218122,2.92780797011547,3.56059401582874,2.81002760729451,0.11981512450592,0.599902730993408,0.127070227073065,4.04434726393021,0.457500602818626,1.38219787324151,2.60736480288415,0.511430914660661,2.0778804455956,2.92034273521964,0.81471491080253,1.61729061793121,1.26361379216837,1.47309299120532,0.910843100738926,1.37941262660084,1.0803727788321,1.50704817835715,1.2246569847239,1.40925092313335,1.49922759295566,2.06962696591213,0.862271971731369,1.13463648100692,1.05570674498369,0.43839146485515,0.556094498451196,1.74126083261083,1.23469281844766,0.995171334092466,0,0,0.568326998791185,0.621377317606506,1.17263029990548,1.08037236876609,1.18372367792605,0.590292695242212,1.3884040159864,0.465067889500816,0.536546802799238,1.40118410840603,1.15191894939436,0.820837320395476,1.21603214318784,1.46199987425332,0.658650345873152,1.8788898626452,1.05144974282064,1.44066457330998,3.63460661282178,2.3800550999719,1.2797295032114,0.464473343720877,0.902072229254653,1.61346819698674,1.11189021922435,2.85338439168839,1.89811624617805,1.81168850196412,1.75934646160189,1.39269530428806,2.33956904542944,2.69645822596266,2.37751854862164,1.99141273254367,0.758671603812327,0.913988100877831,0,0.407302655690628,1.35766741017338,0.701358198903186,1.3279672796094,2.21415221969403,1.8839847340965,2.09775178667061,0.592905254174298,0,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.810676133875177,0,1.43768206527355,1.48856379067401,1.24815069245824,0.252578877947112,0,1.4473305640901,1.29327233116623,0.37898282354097,0.651859905768103,0.509235257325564,1.17345124144251,1.17254380209271,1.42826184531608,2.14647012643579,1.57635144106191,2.43611158613652,0.956728611944923,1.80249646187312,2.76295970985433,2.60368305446721,3.01582567878545,2.71952841909355,0.491764273019036,1.65562047782839,3.37156238974363,3.6335622843583,0,1.51482556322624,3.47059041357882,1.56175497718655,1.50796378412959,1.91175038362042,0.891194696329576,1.13230612315533,1.21443210502468,1.16902343164525,1.58115111178609,1.60660658210904,0.851640511249612,0.890328018336276,0.488660878060728,2.47455184458803,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,2.32585463851399,1.45413491791002,1.42598951353889,0.632073515871632,3.16255825724996,1.03135543248187,6.12791290356818,1.26042765821917,2.19909762430683,1.50035924522115,1.06404140185364,1.24858172321449,1.48094118541909,2.13125464380219,0.704015124191131,1.69465656691056,2.42581237860458,1.6488625294148,1.29171541356724,1.14594557363496,1.55184047204077,0.492422699235184,3.78925087618806,3.70850604021019,0.512612642393558,1.23832120777933,0.925972636848558,2.0720530270516,0.546776910884101,0.457556346413045,0.169978429993855,0.419854356970974,0.414599921413271,1.90934123603023,0.949007980743406,1.42323626988794,0.86404272657441,1.46361807210128,1.74690050996942,1.34864346384821,1.65306911450672,2.6175594198403,2.20345454596048,1.24267862617385,0,0.897099276263873,0.827292452285488,1.75006069509643,0.774958940866387,1.35164900392623,1.05621514781179,0.13020438484395,0.734015410979976,0.483168241652012,0.576060012515731,1.89606672376907,0.810900861160657,0.821687657318618,0.389762468933385,0.716106782669926,0.79472541912506,0.961563596159751,1.03382669022204,0.807731599585181,0.990688486514998,0.907435666231565,0.682205165178267,1.82802499116626,1.75315353272353,1.36038230169127,0.443971906748129,0.269141569828427,0.335769232728157,2.31827512838629,1.50145980360946,2.56412273974171,1.07184189539533,2.00628841614145,1.6942555278512,0.920650473014354,1.71868654031819,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0,0.798049746802062,0.853668028770671,0.486213434136588,0,0,1.55572709461131,0.618105171716683,0.64183841918363,1.26348605881899,1.52087579934144,1.69763707247469,1.40462261204824,0.832326981263301,1.83793500657962,0.952587382566147,0.927074607558844,0.77163688185482,2.06042950401653,1.17759136107518,0.342869252385415,1.59728225543404,1.1921809497366,1.74415699958794,1.78807822789128,0.761531471025089,0.73171189149109,1.31534855718921,1.35804113845862,0.561142271657738,1.18635018124174,0.689531376628944,1.63692417267876,0.619747364743864,1.35034627686799,2.24829520144151,0.467863216890817,1.28922632428979,0.765153328275374,0.882365676478062,0.927471342481686
|short_description=p3@Pnpla6
}}
}}

Revision as of 01:01, 19 April 2012

Short description:p3@Pnpla6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pnpla6_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000004681, ENSMUST00000111070, NM_001122818, NM_015801, uc009krr.1, uc009krs.1, uc012fyk.1_5end
EntrezGene:Pnpla6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pnpla6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:3515378..3515397,%2B&oldid=990082"