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FFCP PHASE1:Mm9::chr8:23276885..23276907,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:23276885..23276907,-
|short_description=p1@Nek3
|description=CAGE_peak_1_at_Nek3_5end
|association_with_transcript=0bp_to_ENSMUST00000110730,NM_011848,uc009lcr.2_5end
|EntrezGene=23954
|EntrezGene=23954
|HGNC=
|HGNC=
|UniProt=Q9R0A5,F8WGD4,Q99K72
|UniProt=Q9R0A5,F8WGD4,Q99K72
|association_with_transcript=0bp_to_ENSMUST00000110730,NM_011848,uc009lcr.2_5end
|description=CAGE_peak_1_at_Nek3_5end
|id=chr8:23276885..23276907,-
|ontology_enrichment_disease=
|phase1_expression=2.7225304007815,6.2815573375085,6.3699893514535,10.5862473957391,5.00895729946347,2.18243053485457,1.63528848416868,1.03298658753261,1.68946466582,0,0.34243593645101,0.319088635981346,5.30722262786738,0.786783621770977,0.333109761815663,1.21485160433896,0,3.62781490161973,4.2505474417779,4.66828616977833,1.02051948181284,1.19149141441062,1.82839852397255,4.63978026100879,4.81759490241057,5.7423196411502,3.01533397311352,4.09395342103189,7.79096019771133,4.03248207615889,1.10865255327652,0,0,0,2.88851619751275,3.82339684324532,3.06254034393554,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,1.25896817975577,1.72340783073175,1.10128051297009,0.782391344348039,0.218025156380447,0.659058548203415,0.777719596297134,0.279972843250725,0,5.36904339384756,3.62681071005672,4.03312558970957,1.02903774414379,1.43266719969378,0.515672092277442,2.63011399117477,3.1739458756322,1.26766280701236,1.35537812827653,2.66788438833342,0.899899717281399,0,0.7104801149461,0,0.384218305321555,2.69592992002042,2.43010688997043,1.47227472945967,1.99955689082663,1.32521124570968,1.34739879136449,2.1086003624012,0,1.10115880999389,0.383062014255563,0.46081959976873,2.37395317914349,2.8361169516747,1.04182674111352,1.95428099300967,2.25105044012672,0.916789486660861,0.294628585473668,1.13897344639282,1.86399445825301,0.984440513331393,1.5870027622425,4.63783181922684,1.72084775396277,1.3599426674155,0,1.29955283489534,2.24013443548668,0.983110940922263,0.511290967734173,1.03914401841148,0.35333957451034,2.25349471642689,0,2.54805239706646,0,1.08245520505607,2.28023878927589,1.01104889002957,2.05530983494308,6.99132285847364,6.53145411885229,3.29622120855658,3.34912026143355,2.53677046981664,3.3158980921577,4.8211369925639,3.14166478324189,6.42706916109372,1.44599356919912,2.65383165584962,1.94120219936891,4.19598885074748,0.969750506270444,3.72783522436244,7.61230072230023,5.86450779077674,12.517395705221,1.1981512450592,1.79970819298022,1.27070227073065,3.44518470631092,3.20250421973039,3.01570445070875,0.695297280769106,1.27857728665165,3.53239675751252,1.46017136760982,2.95334155165917,2.86136032403214,1.26361379216837,6.10281382070775,3.77349284591841,4.82794419310293,3.42118046630164,3.16480117455002,2.65342346690179,2.94661556655154,2.24884138943349,2.32833033665114,3.23351989399263,3.59301552318857,3.69497360744293,1.7535658594206,3.33656699070717,1.39300866608867,1.23469281844766,3.18454826909589,2.80885274925294,0.772043721344145,1.98914449576915,2.89976081549703,2.57978665979206,3.24111710629827,3.07768156260773,3.93528463494808,2.31400669331067,3.0229412817553,1.60964040839772,2.56883753207773,1.97471819896177,3.11918181750281,1.29710095273369,2.48539978623065,1.75640092232841,2.14730270016595,2.10289948564127,3.91037527041281,32.0506219494284,3.96675849995316,2.55945900642281,2.55460339046482,2.70621668776396,2.42020229548011,2.44615848229357,3.04361001780095,11.3886974770683,3.62337700392824,6.03204501120647,7.36138946552258,6.62877896205008,12.5834717211591,12.3198688428576,11.1519113022446,1.51734320762465,2.74196430263349,2.25415471346161,2.03651327845314,2.32742984601151,3.22624771495465,2.78240763346732,1.91893192373483,2.66897837330337,3.08492909804501,0.889357881261447,1.83529616287703,1.96558995113203,1.57403478669398,1.21716072833102,1.68824011826692,0.763877555344259,1.15078454980324,1.13494658742525,0.823684239564244,4.31304619582064,1.48856379067401,2.80833905803104,1.51547326768267,2.51156378930677,1.92977408545347,3.14080423283228,2.84237117655727,3.58522948172457,3.05541154395339,3.05097322775053,4.18765643604539,4.04674189506223,3.31727201358258,3.31033802623001,2.43611158613652,4.30527875375215,2.45794972073607,1.89953480052485,2.4590339958857,0,0.54390568381871,0.983528546038072,3.03530420935206,2.72936002979246,2.81308047821288,1.47541450839008,5.30188947129183,1.57754109708128,0.390438744296638,1.50796378412959,1.19484398976276,0.445597348164788,0.566153061577665,0,1.46127928955656,0.790575555893047,1.92792789853084,2.98074178937364,2.49291845134157,3.58351310577867,2.63952196756057,1.32745138339963,2.18502572539483,1.209294227859,0.754420319023592,2.06711325016541,2.76691633149535,3.10113951801865,2.18120237686503,3.20847640546249,2.84433082142234,1.05418608574999,1.03135543248187,3.74483566329167,4.86164953884538,2.06973894052407,3.42939256050548,3.19212420556092,3.21063871683727,2.46823530903181,3.04464949114599,4.92810586933792,1.90648863777438,2.8668691747145,2.14352128823924,1.13025098687134,1.62844897306021,1.55184047204077,2.1338316966858,13.9910801582328,1.8542530201051,0.854354403989263,2.06386867963222,2.77791791054568,1.50694765603753,2.1871076435364,0.686334519619568,1.5298058699447,2.09927178485487,3.04039942369732,0.954670618015114,3.32152793260192,2.64315307264903,2.80813886136683,2.71814784818809,3.05707589244649,2.69728692769641,2.31429676030941,3.92633912976044,9.98035294346805,3.10669656543463,0.56369293868419,4.63501292736334,4.79829622325583,2.91676782516071,2.58319646955462,1.68956125490778,2.11243029562357,1.69265700297135,6.18670132111694,1.93267296660805,1.72818003754719,2.21207784439725,2.02725215290164,2.77319584345034,2.20865399062252,1.43221356533985,2.18549490259391,2.64429988943931,1.03382669022204,2.1202954489111,3.42930629947499,2.92395936896837,1.46186821109629,2.98256709085021,2.80504565235765,2.26730383615211,2.88581739386284,3.85769583420746,2.01461539636894,7.14801497919105,3.94133198447482,2.93042598827624,1.2862102744744,3.51100472824754,1.12950368523413,2.76195141904306,0,0.859265911718438,2.74033007908257,0.755393897389701,1.35004500046361,1.35096360967266,0,1.03552062350364,2.59468368960442,5.98537310101547,1.87806966329548,0.729320151204882,3.5634237646757,2.38996560985018,2.44471400581777,1.23621034343337,3.20919209591815,2.27427490587418,2.78827229879264,3.58390048633545,1.96647165686753,3.07320731543373,2.46972516509137,3.33405583898152,1.85414921511769,3.27945674788299,2.06042950401653,2.50238164228475,2.74295401908332,3.90446773550542,2.86123427936785,2.18019624948493,3.48204707536723,3.04612588410035,2.74391959309159,2.10455769150274,2.30866993537965,5.05028044491965,3.08451047122853,2.26560309463796,1.22769312950907,1.08455788830176,3.08650577569826,3.74715866906919,2.10538447600868,3.43793686477277,1.53030665655075,3.97064554415128,1.62307484934295
|phase1_expression=2.7225304007815,6.2815573375085,6.3699893514535,10.5862473957391,5.00895729946347,2.18243053485457,1.63528848416868,1.03298658753261,1.68946466582,0,0.34243593645101,0.319088635981346,5.30722262786738,0.786783621770977,0.333109761815663,1.21485160433896,0,3.62781490161973,4.2505474417779,4.66828616977833,1.02051948181284,1.19149141441062,1.82839852397255,4.63978026100879,4.81759490241057,5.7423196411502,3.01533397311352,4.09395342103189,7.79096019771133,4.03248207615889,1.10865255327652,0,0,0,2.88851619751275,3.82339684324532,3.06254034393554,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,1.25896817975577,1.72340783073175,1.10128051297009,0.782391344348039,0.218025156380447,0.659058548203415,0.777719596297134,0.279972843250725,0,5.36904339384756,3.62681071005672,4.03312558970957,1.02903774414379,1.43266719969378,0.515672092277442,2.63011399117477,3.1739458756322,1.26766280701236,1.35537812827653,2.66788438833342,0.899899717281399,0,0.7104801149461,0,0.384218305321555,2.69592992002042,2.43010688997043,1.47227472945967,1.99955689082663,1.32521124570968,1.34739879136449,2.1086003624012,0,1.10115880999389,0.383062014255563,0.46081959976873,2.37395317914349,2.8361169516747,1.04182674111352,1.95428099300967,2.25105044012672,0.916789486660861,0.294628585473668,1.13897344639282,1.86399445825301,0.984440513331393,1.5870027622425,4.63783181922684,1.72084775396277,1.3599426674155,0,1.29955283489534,2.24013443548668,0.983110940922263,0.511290967734173,1.03914401841148,0.35333957451034,2.25349471642689,0,2.54805239706646,0,1.08245520505607,2.28023878927589,1.01104889002957,2.05530983494308,6.99132285847364,6.53145411885229,3.29622120855658,3.34912026143355,2.53677046981664,3.3158980921577,4.8211369925639,3.14166478324189,6.42706916109372,1.44599356919912,2.65383165584962,1.94120219936891,4.19598885074748,0.969750506270444,3.72783522436244,7.61230072230023,5.86450779077674,12.517395705221,1.1981512450592,1.79970819298022,1.27070227073065,3.44518470631092,3.20250421973039,3.01570445070875,0.695297280769106,1.27857728665165,3.53239675751252,1.46017136760982,2.95334155165917,2.86136032403214,1.26361379216837,6.10281382070775,3.77349284591841,4.82794419310293,3.42118046630164,3.16480117455002,2.65342346690179,2.94661556655154,2.24884138943349,2.32833033665114,3.23351989399263,3.59301552318857,3.69497360744293,1.7535658594206,3.33656699070717,1.39300866608867,1.23469281844766,3.18454826909589,2.80885274925294,0.772043721344145,1.98914449576915,2.89976081549703,2.57978665979206,3.24111710629827,3.07768156260773,3.93528463494808,2.31400669331067,3.0229412817553,1.60964040839772,2.56883753207773,1.97471819896177,3.11918181750281,1.29710095273369,2.48539978623065,1.75640092232841,2.14730270016595,2.10289948564127,3.91037527041281,32.0506219494284,3.96675849995316,2.55945900642281,2.55460339046482,2.70621668776396,2.42020229548011,2.44615848229357,3.04361001780095,11.3886974770683,3.62337700392824,6.03204501120647,7.36138946552258,6.62877896205008,12.5834717211591,12.3198688428576,11.1519113022446,1.51734320762465,2.74196430263349,2.25415471346161,2.03651327845314,2.32742984601151,3.22624771495465,2.78240763346732,1.91893192373483,2.66897837330337,3.08492909804501,0.889357881261447,1.83529616287703,1.96558995113203,1.57403478669398,1.21716072833102,1.68824011826692,0.763877555344259,1.15078454980324,1.13494658742525,0.823684239564244,4.31304619582064,1.48856379067401,2.80833905803104,1.51547326768267,2.51156378930677,1.92977408545347,3.14080423283228,2.84237117655727,3.58522948172457,3.05541154395339,3.05097322775053,4.18765643604539,4.04674189506223,3.31727201358258,3.31033802623001,2.43611158613652,4.30527875375215,2.45794972073607,1.89953480052485,2.4590339958857,0,0.54390568381871,0.983528546038072,3.03530420935206,2.72936002979246,2.81308047821288,1.47541450839008,5.30188947129183,1.57754109708128,0.390438744296638,1.50796378412959,1.19484398976276,0.445597348164788,0.566153061577665,0,1.46127928955656,0.790575555893047,1.92792789853084,2.98074178937364,2.49291845134157,3.58351310577867,2.63952196756057,1.32745138339963,2.18502572539483,1.209294227859,0.754420319023592,2.06711325016541,2.76691633149535,3.10113951801865,2.18120237686503,3.20847640546249,2.84433082142234,1.05418608574999,1.03135543248187,3.74483566329167,4.86164953884538,2.06973894052407,3.42939256050548,3.19212420556092,3.21063871683727,2.46823530903181,3.04464949114599,4.92810586933792,1.90648863777438,2.8668691747145,2.14352128823924,1.13025098687134,1.62844897306021,1.55184047204077,2.1338316966858,13.9910801582328,1.8542530201051,0.854354403989263,2.06386867963222,2.77791791054568,1.50694765603753,2.1871076435364,0.686334519619568,1.5298058699447,2.09927178485487,3.04039942369732,0.954670618015114,3.32152793260192,2.64315307264903,2.80813886136683,2.71814784818809,3.05707589244649,2.69728692769641,2.31429676030941,3.92633912976044,9.98035294346805,3.10669656543463,0.56369293868419,4.63501292736334,4.79829622325583,2.91676782516071,2.58319646955462,1.68956125490778,2.11243029562357,1.69265700297135,6.18670132111694,1.93267296660805,1.72818003754719,2.21207784439725,2.02725215290164,2.77319584345034,2.20865399062252,1.43221356533985,2.18549490259391,2.64429988943931,1.03382669022204,2.1202954489111,3.42930629947499,2.92395936896837,1.46186821109629,2.98256709085021,2.80504565235765,2.26730383615211,2.88581739386284,3.85769583420746,2.01461539636894,7.14801497919105,3.94133198447482,2.93042598827624,1.2862102744744,3.51100472824754,1.12950368523413,2.76195141904306,0,0.859265911718438,2.74033007908257,0.755393897389701,1.35004500046361,1.35096360967266,0,1.03552062350364,2.59468368960442,5.98537310101547,1.87806966329548,0.729320151204882,3.5634237646757,2.38996560985018,2.44471400581777,1.23621034343337,3.20919209591815,2.27427490587418,2.78827229879264,3.58390048633545,1.96647165686753,3.07320731543373,2.46972516509137,3.33405583898152,1.85414921511769,3.27945674788299,2.06042950401653,2.50238164228475,2.74295401908332,3.90446773550542,2.86123427936785,2.18019624948493,3.48204707536723,3.04612588410035,2.74391959309159,2.10455769150274,2.30866993537965,5.05028044491965,3.08451047122853,2.26560309463796,1.22769312950907,1.08455788830176,3.08650577569826,3.74715866906919,2.10538447600868,3.43793686477277,1.53030665655075,3.97064554415128,1.62307484934295
|short_description=p1@Nek3
}}
}}

Revision as of 00:51, 19 April 2012

Short description:p1@Nek3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nek3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000110730, NM_011848, uc009lcr.2_5end
EntrezGene:Nek3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nek3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B97.79
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H712.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I332.05
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E312.32
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.23
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I19.98
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D96.19
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B41.62





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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