Personal tools

FFCP PHASE1:Mm9::chr4:155079197..155079292,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Ssu72_5end
|description=CAGE_peak_1_at_Ssu72_5end
|id=chr4:155079197..155079292,+
|id=chr4:155079197..155079292,+
|ontology_enrichment_celltype=CL:0002371!3.80e-13!118;CL:0000548!1.25e-11!115;CL:0000004!1.25e-11!115;CL:0000255!1.25e-11!115;CL:0000144!2.60e-11!121;CL:0000012!2.60e-11!121;CL:0002321!4.72e-10!70;CL:0000220!4.72e-10!70;CL:0000055!8.61e-09!50;CL:0002319!1.65e-08!43;CL:0000221!1.94e-08!44;CL:0000133!1.94e-08!44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=58.7746268874594,97.0151633237424,83.7198600476746,70.4741612344914,103.685416098894,78.0638614390288,79.1946851618832,69.0809780412433,25.4827587094517,28.0877431586392,63.8643021481134,64.5356766272271,74.3011167901433,82.4374394811146,58.294208317741,57.7054512061004,49.6688933470984,68.4552898827376,67.3231869004177,61.9608891625124,52.8969264739654,62.9504630613613,59.8147517128162,69.9166887607187,73.1815606604272,98.1936658636685,92.183067178042,84.2492519801826,90.6411710806903,82.4138524314974,113.082560434205,83.8240488966713,81.8036167487478,79.2408405077194,56.3260658514985,63.6678691723026,63.4966697975968,139.789564666127,139.077691325236,95.2813214032313,198.234011466452,161.881779935152,143.711064497221,50.8623144621332,44.3017189429279,56.8994931701213,76.6743517461078,75.0006537948736,80.6248290635512,80.6884081158276,71.1131021856842,74.7513334697852,44.6301732113579,46.423177088726,41.0034434953806,87.468208252222,79.6562963029744,92.8209766099396,78.4987868135239,60.8339626162838,60.8478147365932,103.008737749016,85.3723004266694,104.388367204642,119.652829870604,120.071139425891,74.3008274085644,54.1747810503392,65.2207661420324,62.2377375709094,67.9349625164964,75.6975108670079,70.8988016454679,62.5927983988415,50.4147177555923,68.9414089957516,66.0695285996332,65.2482297615309,65.4363831671597,82.4289298313711,62.760523511253,77.0951788424005,77.6128737223839,62.4666497135165,60.9665008629472,65.9968031461016,57.2334156812394,78.6605661382768,90.114170066489,73.6066995440091,53.3350659211087,71.4151817894551,64.5972767022363,50.7321000139548,56.5305483179472,46.5947962581229,51.2622133480894,41.9258593542022,55.5942049850139,44.5207863883029,59.2950797259825,48.7640614174408,35.6727335589304,71.1066703153331,96.5550042910015,98.5569876698134,86.444680097528,50.6976425952626,114.191606688403,57.1502235399575,55.6887898919296,55.4127170528097,60.4212602810873,57.2746034099966,48.211369925639,53.2826347237824,94.9228676099996,51.1881723496487,74.3072863637894,45.6182516851694,52.7811229120341,53.8211530980097,74.5567044872489,79.3435959901293,62.8340120440365,69.995233127154,42.8938145731195,50.9917321344397,44.3475092484996,63.9606030258593,51.6975681185048,55.2879149296603,68.1391335153724,69.2988889365196,65.4532340362614,62.6251275441545,47.4571435542474,47.7722767142757,50.5445516867349,54.0835569628238,53.0891407287831,56.5559176906343,65.1824909895364,51.6917525176503,48.5100238948968,55.47324088334,61.7494364848613,57.1734449333225,57.9877900989346,49.9240051643043,48.034656896758,52.1685843177628,48.1021741160284,50.8448163122363,45.4778521461555,51.5498751059897,50.5593494865529,51.469581422943,48.5919583966463,50.9529400437335,45.0290035163705,52.9382460695384,46.4019681747012,52.142521413062,48.2856063337494,49.0646623423361,46.1430250407345,45.7720142079304,55.7857891206699,48.4294019033331,52.6947262048062,47.8073958880837,51.813827208688,48.8511364287753,65.4001740034436,54.2307307238829,70.379200775549,86.7397858656425,58.2276923961189,53.6466711997613,54.7686710618897,56.0680198452892,60.4868279258047,72.6661891749976,59.3161326930639,66.8677756179484,60.5717853208649,63.0692016370448,61.2187233554037,67.4114556490666,61.1670681145385,55.9586977844772,72.073802362171,56.2102682039866,50.7184810528862,53.152996567627,51.0095041250856,51.5498276193841,47.3009297689444,40.1499602504518,44.9016361626332,49.2354684047984,51.2863044860768,52.7230534062857,50.7122207392064,46.7713193760496,54.3665125321188,46.0648375127116,41.5040138403714,48.0452549542854,42.4794294150593,45.0280717628454,25.8782771749238,50.6111688829165,57.1028941799646,46.2219346643215,54.1780188836175,52.1039003072437,64.1093569878118,62.9111487078009,56.385881848941,59.7502701928662,60.315393810145,54.4395336685901,69.27069949783,58.9303616530552,59.2708141839278,56.9164252397352,59.3171739405852,57.0244335210768,56.6406740520138,56.8470800225341,66.3481649332798,118.02753338866,64.4211197654937,60.7060841870411,63.5780336351656,63.9975808793429,40.3279965626622,47.2120633872177,64.0481685415001,69.107657740505,57.9488939901229,60.6980746799482,61.7152327208232,62.2768367735431,72.4611155998061,77.4478023464977,75.1046778098395,68.7627617142667,57.6276745945571,48.2557785938262,45.2825747002941,60.5440351309205,42.4784442687881,56.0823269518007,51.0926811270429,55.449893448234,58.1744728975122,57.7978078134584,60.730648894532,45.0781824552107,41.3536958926277,50.5658812697306,51.6551182017494,43.3169281642385,53.7894577090985,52.5778394571426,61.3160161130256,63.0150882992881,54.9754724291048,55.1159646390398,57.098510148936,66.9822888052118,62.6573460530107,80.072522786524,83.8007912608855,61.6674586001135,54.5749762232161,57.1766528318918,46.5552141612232,55.9720468130659,62.3768990387881,55.6275906031529,60.4882918024399,47.0562058956147,63.3365283604414,51.4245887622806,51.3970296231055,50.5599762786415,34.5056212887526,35.8275717948564,35.9319931891502,74.4643082051789,50.4555909761911,42.6970880966382,48.7104087106324,52.6902505956461,51.7519276078441,58.665990677397,50.0879941695536,55.7540156425983,79.5835936011608,55.2991988647364,63.1336091326293,40.9675336160502,51.4575905321574,41.8070054939702,40.0395452780966,43.9285926276023,42.6006776284087,47.1339873135099,47.6061423692727,63.5366237772396,45.2207109824849,73.9466022269937,60.4121141564689,59.7777770699295,62.3619950293416,53.8870353959119,59.8030877891607,56.2514703753454,59.0758108698309,58.4595745199775,66.2237149831949,67.3518916714095,66.3688167837714,61.2869431248899,69.1911260914888,60.083551658031,67.7057157790897,116.807441305537,191.052693422321,56.0249822693352,66.6272787851696,70.6965269671643,65.3823556191151,50.1572104035363,51.3924176781531,64.9058583475119,68.7474616127276,83.3487934366885,64.3977568584404,66.4746629702936,68.8522950236442,58.5417564191487,79.2999215722358,79.2173276980285,69.2261608386458,58.2576315165505,51.0493481204861,49.8368769990003,67.2858252035823,64.896758482855,57.1174090450151,55.0113602827848,59.3700537744858,52.0556256233423,55.2584873760723,52.8153755881013,49.349074436628,53.8451531724951,52.2088412806525,54.2974808062704,49.9461444822327,43.5974838247973,54.3953389060365,56.671584251743,47.3159568291873,52.5328386231639,49.1178551291481,55.3769847369172,58.5360346183356,55.6764119927231,56.5247436176867,47.3525480588117,51.4697591475816,50.5028044491965,54.6907433552443,54.5714832360622,61.3846564754534,51.9038417972986,50.1557188550968,49.7123050096512,50.0613642073174,42.3295976475148,49.1611013416927,49.8536607210105,59.8219015900687
|phase1_expression=58.7746268874594,97.0151633237424,83.7198600476746,70.4741612344914,103.685416098894,78.0638614390288,79.1946851618832,69.0809780412433,25.4827587094517,28.0877431586392,63.8643021481134,64.5356766272271,74.3011167901433,82.4374394811146,58.294208317741,57.7054512061004,49.6688933470984,68.4552898827376,67.3231869004177,61.9608891625124,52.8969264739654,62.9504630613613,59.8147517128162,69.9166887607187,73.1815606604272,98.1936658636685,92.183067178042,84.2492519801826,90.6411710806903,82.4138524314974,113.082560434205,83.8240488966713,81.8036167487478,79.2408405077194,56.3260658514985,63.6678691723026,63.4966697975968,139.789564666127,139.077691325236,95.2813214032313,198.234011466452,161.881779935152,143.711064497221,50.8623144621332,44.3017189429279,56.8994931701213,76.6743517461078,75.0006537948736,80.6248290635512,80.6884081158276,71.1131021856842,74.7513334697852,44.6301732113579,46.423177088726,41.0034434953806,87.468208252222,79.6562963029744,92.8209766099396,78.4987868135239,60.8339626162838,60.8478147365932,103.008737749016,85.3723004266694,104.388367204642,119.652829870604,120.071139425891,74.3008274085644,54.1747810503392,65.2207661420324,62.2377375709094,67.9349625164964,75.6975108670079,70.8988016454679,62.5927983988415,50.4147177555923,68.9414089957516,66.0695285996332,65.2482297615309,65.4363831671597,82.4289298313711,62.760523511253,77.0951788424005,77.6128737223839,62.4666497135165,60.9665008629472,65.9968031461016,57.2334156812394,78.6605661382768,90.114170066489,73.6066995440091,53.3350659211087,71.4151817894551,64.5972767022363,50.7321000139548,56.5305483179472,46.5947962581229,51.2622133480894,41.9258593542022,55.5942049850139,44.5207863883029,59.2950797259825,48.7640614174408,35.6727335589304,71.1066703153331,96.5550042910015,98.5569876698134,86.444680097528,50.6976425952626,114.191606688403,57.1502235399575,55.6887898919296,55.4127170528097,60.4212602810873,57.2746034099966,48.211369925639,53.2826347237824,94.9228676099996,51.1881723496487,74.3072863637894,45.6182516851694,52.7811229120341,53.8211530980097,74.5567044872489,79.3435959901293,62.8340120440365,69.995233127154,42.8938145731195,50.9917321344397,44.3475092484996,63.9606030258593,51.6975681185048,55.2879149296603,68.1391335153724,69.2988889365196,65.4532340362614,62.6251275441545,47.4571435542474,47.7722767142757,50.5445516867349,54.0835569628238,53.0891407287831,56.5559176906343,65.1824909895364,51.6917525176503,48.5100238948968,55.47324088334,61.7494364848613,57.1734449333225,57.9877900989346,49.9240051643043,48.034656896758,52.1685843177628,48.1021741160284,50.8448163122363,45.4778521461555,51.5498751059897,50.5593494865529,51.469581422943,48.5919583966463,50.9529400437335,45.0290035163705,52.9382460695384,46.4019681747012,52.142521413062,48.2856063337494,49.0646623423361,46.1430250407345,45.7720142079304,55.7857891206699,48.4294019033331,52.6947262048062,47.8073958880837,51.813827208688,48.8511364287753,65.4001740034436,54.2307307238829,70.379200775549,86.7397858656425,58.2276923961189,53.6466711997613,54.7686710618897,56.0680198452892,60.4868279258047,72.6661891749976,59.3161326930639,66.8677756179484,60.5717853208649,63.0692016370448,61.2187233554037,67.4114556490666,61.1670681145385,55.9586977844772,72.073802362171,56.2102682039866,50.7184810528862,53.152996567627,51.0095041250856,51.5498276193841,47.3009297689444,40.1499602504518,44.9016361626332,49.2354684047984,51.2863044860768,52.7230534062857,50.7122207392064,46.7713193760496,54.3665125321188,46.0648375127116,41.5040138403714,48.0452549542854,42.4794294150593,45.0280717628454,25.8782771749238,50.6111688829165,57.1028941799646,46.2219346643215,54.1780188836175,52.1039003072437,64.1093569878118,62.9111487078009,56.385881848941,59.7502701928662,60.315393810145,54.4395336685901,69.27069949783,58.9303616530552,59.2708141839278,56.9164252397352,59.3171739405852,57.0244335210768,56.6406740520138,56.8470800225341,66.3481649332798,118.02753338866,64.4211197654937,60.7060841870411,63.5780336351656,63.9975808793429,40.3279965626622,47.2120633872177,64.0481685415001,69.107657740505,57.9488939901229,60.6980746799482,61.7152327208232,62.2768367735431,72.4611155998061,77.4478023464977,75.1046778098395,68.7627617142667,57.6276745945571,48.2557785938262,45.2825747002941,60.5440351309205,42.4784442687881,56.0823269518007,51.0926811270429,55.449893448234,58.1744728975122,57.7978078134584,60.730648894532,45.0781824552107,41.3536958926277,50.5658812697306,51.6551182017494,43.3169281642385,53.7894577090985,52.5778394571426,61.3160161130256,63.0150882992881,54.9754724291048,55.1159646390398,57.098510148936,66.9822888052118,62.6573460530107,80.072522786524,83.8007912608855,61.6674586001135,54.5749762232161,57.1766528318918,46.5552141612232,55.9720468130659,62.3768990387881,55.6275906031529,60.4882918024399,47.0562058956147,63.3365283604414,51.4245887622806,51.3970296231055,50.5599762786415,34.5056212887526,35.8275717948564,35.9319931891502,74.4643082051789,50.4555909761911,42.6970880966382,48.7104087106324,52.6902505956461,51.7519276078441,58.665990677397,50.0879941695536,55.7540156425983,79.5835936011608,55.2991988647364,63.1336091326293,40.9675336160502,51.4575905321574,41.8070054939702,40.0395452780966,43.9285926276023,42.6006776284087,47.1339873135099,47.6061423692727,63.5366237772396,45.2207109824849,73.9466022269937,60.4121141564689,59.7777770699295,62.3619950293416,53.8870353959119,59.8030877891607,56.2514703753454,59.0758108698309,58.4595745199775,66.2237149831949,67.3518916714095,66.3688167837714,61.2869431248899,69.1911260914888,60.083551658031,67.7057157790897,116.807441305537,191.052693422321,56.0249822693352,66.6272787851696,70.6965269671643,65.3823556191151,50.1572104035363,51.3924176781531,64.9058583475119,68.7474616127276,83.3487934366885,64.3977568584404,66.4746629702936,68.8522950236442,58.5417564191487,79.2999215722358,79.2173276980285,69.2261608386458,58.2576315165505,51.0493481204861,49.8368769990003,67.2858252035823,64.896758482855,57.1174090450151,55.0113602827848,59.3700537744858,52.0556256233423,55.2584873760723,52.8153755881013,49.349074436628,53.8451531724951,52.2088412806525,54.2974808062704,49.9461444822327,43.5974838247973,54.3953389060365,56.671584251743,47.3159568291873,52.5328386231639,49.1178551291481,55.3769847369172,58.5360346183356,55.6764119927231,56.5247436176867,47.3525480588117,51.4697591475816,50.5028044491965,54.6907433552443,54.5714832360622,61.3846564754534,51.9038417972986,50.1557188550968,49.7123050096512,50.0613642073174,42.3295976475148,49.1611013416927,49.8536607210105,59.8219015900687
|short_description=p1@Ssu72
|short_description=p1@Ssu72
}}
}}

Revision as of 21:07, 18 April 2012

Short description:p1@Ssu72
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ssu72_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000105595, ENSMUST00000140322_5end
EntrezGene:Ssu72
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ssu72

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G758.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I597.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I683.72
CD326+ enterocyte, pool1.CNhs13542.11848-124I370.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I4103.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I778.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I879.19
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E969.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F228.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E663.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F164.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E474.30
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E882.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A158.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A357.71
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A549.67
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A268.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A467.32
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A661.96
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A352.90
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H262.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I959.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D169.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D273.18
GP2+ M cell, pool1.CNhs13228.11845-124H998.19
GP2+ M cell, pool2.CNhs13231.11846-124I192.18
GP2+ M cell, pool3.CNhs13240.11847-124I284.25
Ileum epithelium, pool1.CNhs13199.10252-104B990.64
Ileum epithelium, pool2.CNhs13232.10253-104C182.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8113.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I383.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G681.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F556.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F663.67
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F763.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8139.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1139.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H395.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9198.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2161.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4143.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D850.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D944.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B356.90
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B776.67
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C275.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B880.62
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C380.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C471.11
Mouse Astrocytes, donor3.CNhs12107.11633-122C474.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A244.63
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I946.42
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C187.47
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E179.66
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C592.82
Mouse Granule cells, donor1.CNhs12131.11713-123C378.50
Mouse Granule cells, donor2.CNhs12357.11731-123E360.83
Mouse Granule cells, donor3.CNhs12108.11636-122C760.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6103.01
Mouse Meningeal cells, donor3.CNhs12109.11639-122D185.37
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7104.39
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7119.65
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2120.07
Mouse Microglia, donor1.CNhs12629.11718-123C874.30
Mouse Microglia, donor2.CNhs12634.11736-123E854.17
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D565.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F562.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D967.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F175.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D570.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D262.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F250.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.94
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D366.07
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F365.25
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D765.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D482.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F462.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D877.10
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E477.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E562.47
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I660.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D666.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F657.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E178.66
Mouse Schwann, donor1.CNhs12507.11728-123D990.11
Mouse Schwann, donor2.CNhs12573.11746-123F973.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G353.34
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F771.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C464.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C850.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F456.53
Mouse hepatocyte, donor8.CNhs13091.11824-124F646.59
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A751.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I741.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E355.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I844.52
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G659.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H148.76
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G196.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G298.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G386.44
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B650.70
accessory axillary lymph node, adult.CNhs10475.1063-29H9114.19
adrenal gland, adult.CNhs10508.49-24D757.15
adrenal gland, embryo E14.CNhs11038.406-44C555.69
adrenal gland, embryo E16.CNhs11004.1254-43D655.41
adrenal gland, embryo E17.CNhs11043.1263-45I160.42
adrenal gland, embryo E18.CNhs11026.1262-18F557.27
adrenal gland, neonate N00.CNhs11191.1311-23C148.21
adrenal gland, neonate N25.CNhs11223.1377-27I353.28
amnion, adult pregnant day17.5.CNhs10488.583-22A894.92
aorta, adult.CNhs10498.46-23H151.19
bone (os femoris), adult.CNhs10483.56-12G274.31
bone (os femoris), neonate N02.CNhs11227.1985-43F545.62
bone (os femoris), neonate N16.CNhs11225.1525-43A652.78
bone (os femoris), neonate N20.CNhs11195.1350-25C353.82
cecum, adult.CNhs10467.37-13H474.56
cerebellum, adult.CNhs10494.15-8B279.34
cerebellum, neonate N30.CNhs11135.1395-42I262.83
colon, adult.CNhs10468.36-18H770.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C742.89
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D150.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D444.35
corpora quadrigemina, adult.CNhs10501.16-22A463.96
corpus striatum, adult.CNhs10487.19-21D851.70
corpus striatum, neonate N00.CNhs11226.630-43F155.29
cortex, adult.CNhs10473.12-14D568.14
cortex, neonate N30.CNhs11107.1392-42F269.30
diencephalon, adult.CNhs10482.20-12F265.45
diencephalon, neonate N30.CNhs11201.1388-42B262.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B147.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A247.77
epididymis, adult.CNhs10490.58-23B250.54
eyeball, adult.CNhs10484.31-12G454.08
eyeball, embryo E12.CNhs11016.345-16C653.09
eyeball, embryo E14.CNhs10521.399-16E256.56
eyeball, embryo E15.CNhs10593.426-16C965.18
eyeball, embryo E17.CNhs11023.1261-18D451.69
eyeball, neonate N00.CNhs11207.633-15C648.51
eyeball, neonate N01.CNhs11140.1532-43E755.47
eyeball, neonate N02.CNhs11205.1551-44G861.75
eyeball, neonate N16.CNhs11188.777-19A257.17
forelimb, embryo E11.CNhs10596.335-25E257.99
forelimb, embryo E12.CNhs10600.359-14H249.92
forelimb, embryo E13.CNhs10589.384-1E248.03
forelimb, embryo E14.CNhs10577.413-26A852.17
forelimb, embryo E15.CNhs11007.437-20E748.10
forelimb, embryo E17.CNhs10598.1517-43C450.84
forelimb, embryo E18.CNhs11008.1520-43B545.48
gonad, embryo E13.CNhs11044.1564-45I651.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C850.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D251.47
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D548.59
heart, embryo E11.CNhs10586.331-24E950.95
heart, embryo E12.CNhs11015.353-12F545.03
heart, embryo E13.CNhs11013.376-3I952.94
heart, embryo E14.CNhs10597.403-26D446.40
heart, embryo E15.CNhs11017.431-16C852.14
heart, embryo E16.CNhs11021.457-17C648.29
heart, embryo E17.CNhs11025.479-18E549.06
heart, embryo E18.CNhs11030.1283-20G346.14
heart, neonate N00.CNhs11213.639-21E345.77
heart, neonate N03.CNhs11221.1349-25I255.79
heart, neonate N10.CNhs11118.749-24G148.43
heart, neonate N16.CNhs11209.782-15G152.69
heart, neonate N20.CNhs11127.821-26I647.81
heart, neonate N25.CNhs11196.1351-25D351.81
heart, neonate N30.CNhs11202.1390-42D248.85
hippocampus, adult.CNhs10478.13-16E865.40
hippocampus, neonate N00.CNhs11228.627-43G154.23
intestinal mucosa, adult.CNhs10506.860-29I370.38
intestine, adult.CNhs10496.178-9A386.74
intestine, embryo E12.CNhs11019.1251-16I558.23
intestine, embryo E13.CNhs11010.381-16D553.65
intestine, embryo E15.CNhs10602.976-16D854.77
intestine, embryo E16.CNhs10585.463-22H456.07
intestine, embryo E17.CNhs10582.482-18D360.49
intestine, embryo E18.CNhs10526.1289-20F772.67
intestine, neonate N00.CNhs11126.644-26D159.32
intestine, neonate N01.CNhs11192.1322-23E966.87
intestine, neonate N06.CNhs11102.688-20B860.57
intestine, neonate N07.CNhs11095.720-20F263.07
intestine, neonate N10.CNhs11098.755-23A561.22
intestine, neonate N20.CNhs11187.827-18D167.41
intestine, neonate N25.CNhs11121.1352-25E361.17
intestine, neonate N30.CNhs11131.1384-42G155.96
kidney, embryo E14.CNhs10606.411-4I972.07
kidney, embryo E15.CNhs10997.434-16F856.21
kidney, embryo E16.CNhs10584.464-22A550.72
kidney, embryo E17.CNhs11028.483-18I253.15
kidney, embryo E18.CNhs11001.1288-20C751.01
kidney, neonate N00.CNhs11214.646-21G751.55
kidney, neonate N10.CNhs11206.758-6D547.30
kidney, neonate N20.CNhs11113.832-19I140.15
kidney, neonate N25.CNhs11122.1353-25F344.90
kidney, neonate N30.CNhs11203.1385-42H149.24
liver, adult pregnant day01.CNhs10466.508-5B251.29
liver, embryo E12.CNhs10601.355-15F852.72
liver, embryo E13.CNhs10524.378-3H650.71
liver, embryo E14.CNhs10594.409-16E146.77
liver, embryo E15.CNhs10520.433-16D754.37
liver, embryo E16.CNhs10523.462-17F546.06
liver, embryo E17.CNhs10510.481-18A341.50
liver, embryo E18.CNhs10579.499-43G448.05
liver, neonate N00.CNhs11117.641-24F442.48
liver, neonate N03.CNhs11123.1345-25G245.03
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H250.61
liver, neonate N10.CNhs11115.751-24B957.10
liver, neonate N20.CNhs11220.823-25A346.22
liver, neonate N25.CNhs11198.1368-26H154.18
liver, neonate N30.CNhs11106.1382-42D152.10
lung, adult.CNhs10474.28-22B164.11
lung, embryo E12.CNhs10522.354-16G262.91
lung, embryo E14.CNhs10604.404-26F856.39
lung, embryo E15.CNhs11020.432-17C559.75
lung, embryo E16.CNhs10998.458-17B660.32
lung, embryo E17.CNhs10605.480-44A654.44
lung, embryo E18.CNhs10583.1287-20I669.27
lung, neonate N00.CNhs11224.640-42C658.93
lung, neonate N06.CNhs11212.683-20E559.27
lung, neonate N07.CNhs11111.715-19A356.92
lung, neonate N10.CNhs11219.750-23E659.32
lung, neonate N20.CNhs11109.822-18A457.02
lung, neonate N25.CNhs11119.1359-25C756.64
lung, neonate N30.CNhs11133.1394-42H256.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A166.35
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1118.03
mammary gland, adult lactating day02.CNhs10480.595-22B664.42
mammary gland, adult pregnant day19.CNhs10476.588-5H260.71
medulla oblongata, adult.CNhs10477.17-12C263.58
medulla oblongata, neonate N30.CNhs11200.1396-42A364.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C247.21
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E164.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E269.11
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E357.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D760.70
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D861.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D962.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D472.46
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D577.45
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D675.10
olfactory brain, adult.CNhs10489.18-22I968.76
ovary, adult.CNhs10507.91-2I757.63
ovary, embryo E18.CNhs11040.505-44H748.26
ovary, neonate N00.CNhs11217.1299-22I445.28
oviduct, adult pregnant day01.CNhs10500.988-6G660.54
pancreas, adult.CNhs10486.34-16E442.48
pancreas, embryo E14.CNhs11012.405-44F456.08
pancreas, embryo E15.CNhs11042.1556-45F251.09
pancreas, embryo E16.CNhs11003.460-26E555.45
pancreas, embryo E17.CNhs10599.1558-45G358.17
pancreas, embryo E18.CNhs10580.1535-43I757.80
pancreas, neonate N00.CNhs11105.645-26G960.73
pancreas, neonate N01.CNhs11138.1531-43D745.08
pancreas, neonate N02.CNhs11139.1539-43D841.35
pancreas, neonate N16.CNhs11136.787-43B650.57
pancreas, neonate N25.CNhs11094.1555-45E251.66
pancreas, neonate N30.CNhs11182.1548-44H543.32
pituitary gland, adult.CNhs10493.21-1G853.79
pituitary gland, embryo E12.CNhs11018.346-16E652.58
pituitary gland, embryo E13.CNhs11009.370-44C761.32
pituitary gland, embryo E14.CNhs11037.398-44A563.02
pituitary gland, embryo E15.CNhs10592.427-16B954.98
pituitary gland, embryo E16.CNhs11036.449-43F655.12
pituitary gland, embryo E17.CNhs11039.1265-44F557.10
pituitary gland, neonate N00.CNhs11190.1308-22E966.98
placenta, adult pregnant day10.CNhs10472.539-13I762.66
placenta, adult pregnant day17.CNhs10464.577-18G380.07
prostate, adult.CNhs10470.859-1F883.80
skin, adult.CNhs10492.30-1C361.67
skin, neonate N00.CNhs11124.650-25G454.57
skin, neonate N03.CNhs11215.662-22H357.18
skin, neonate N06.CNhs11097.693-20I546.56
skin, neonate N10.CNhs11108.762-6C455.97
small intestine, neonate N16.CNhs11114.790-21I162.38
spinal cord, adult.CNhs10505.24-13C955.63
spleen, adult.CNhs10465.25-2G260.49
spleen, embryo E16.CNhs11035.461-43C147.06
spleen, embryo E18.CNhs11011.1271-21F263.34
spleen, neonate N10.CNhs11116.752-24D151.42
spleen, neonate N20.CNhs11112.824-19H151.40
spleen, neonate N25.CNhs11099.1354-25G350.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C634.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C935.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.93
stomach, adult.CNhs10503.33-1H674.46
stomach, embryo E12.CNhs10588.356-43E350.46
stomach, embryo E15.CNhs10603.1252-16G842.70
stomach, embryo E16.CNhs11022.459-17D448.71
stomach, embryo E17.CNhs11006.1035-18D552.69
stomach, embryo E18.CNhs10999.1286-20C651.75
stomach, neonate N03.CNhs11193.1340-24B858.67
stomach, neonate N07.CNhs11210.718-18A950.09
stomach, neonate N25.CNhs11104.1355-25E455.75
stomach, neonate N30.CNhs11134.1386-42I179.58
submandibular gland, adult.CNhs10469.59-29C155.30
testis, adult.CNhs10504.57-7G563.13
testis, embryo E13.CNhs11031.389-23F540.97
testis, embryo E15.CNhs11034.443-27C551.46
testis, embryo E16.CNhs11033.470-26G541.81
testis, embryo E17.CNhs11029.486-18I540.04
testis, embryo E18.CNhs11027.503-18G543.93
testis, neonate N00.CNhs11189.1300-22B742.60
testis, neonate N07.CNhs11222.726-26I447.13
testis, neonate N10.CNhs11204.763-44D947.61
testis, neonate N20.CNhs11110.839-18H363.54
testis, neonate N30.CNhs11130.1391-42E245.22
thymus, adult.CNhs10471.38-12B573.95
thymus, embryo E14.CNhs11041.402-44I460.41
thymus, embryo E15.CNhs11005.430-45I259.78
thymus, embryo E16.CNhs11002.456-26C562.36
thymus, embryo E17.CNhs10581.478-18C153.89
thymus, embryo E18.CNhs10595.1273-19G459.80
thymus, neonate N02.CNhs11181.1541-43F856.25
thymus, neonate N03.CNhs11137.2104-43C759.08
thymus, neonate N06.CNhs11197.681-26C458.46
thymus, neonate N07.CNhs11211.713-19D366.22
thymus, neonate N10.CNhs11194.748-24E467.35
thymus, neonate N20.CNhs11186.820-7A266.37
thymus, neonate N25.CNhs11125.1362-25G761.29
thymus, neonate N30.CNhs11132.1393-42G269.19
tongue, adult.CNhs10499.32-1B460.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H367.71
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7116.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5191.05
urinary bladder, adult.CNhs10481.879-12E456.02
uterus, adult pregnant day19.CNhs10497.590-15F566.63
uterus, adult.CNhs10509.92-27E570.70
vagina, adult.CNhs10502.89-27D565.38
vesicular gland, adult.CNhs10491.51-27F850.16
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A151.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A264.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A368.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D783.35
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A464.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A566.47
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A668.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A879.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A979.22
whole body, embryo E11.CNhs11014.324-5I869.23
whole body, embryo E12.CNhs10587.857-27C958.26
whole body, embryo E13.CNhs10512.372-23H251.05
whole body, embryo E14.5.CNhs10578.420-27D249.84
whole body, embryo E14.CNhs10519.395-14B167.29
whole body, embryo E16.CNhs10514.453-14F264.90
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G557.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G555.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G559.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G552.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G555.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G552.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G549.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G553.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G552.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G554.30
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G549.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G543.60
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G554.40
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G556.67
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G547.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G552.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G549.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G555.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G558.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G555.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G556.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G547.35
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G551.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G550.50
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G554.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G554.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G561.38
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G551.90
whole body, embryo E17.5.CNhs10513.490-9F950.16
whole body, embryo E17.CNhs10517.475-3I549.71
whole body, embryo E18.CNhs10516.493-3B350.06
whole body, neonate N00.CNhs10525.657-19C242.33
whole body, neonate N01.CNhs10576.659-23C649.16
whole body, neonate N06.CNhs10515.692-21D149.85
whole body, neonate N10.CNhs10518.761-6B459.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:155079197..155079292,%2B&oldid=955203"