Personal tools

FFCP PHASE1:Mm9::chr4:143002905..143002917,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_2_at_Pramef8_5end
|description=CAGE_peak_2_at_Pramef8_5end
|id=chr4:143002905..143002917,+
|id=chr4:143002905..143002917,+
|ontology_enrichment_celltype=CL:0000063!3.90e-10!66;CL:0000144!1.22e-08!121;CL:0000012!1.22e-08!121;CL:0002371!9.52e-08!118;CL:0000034!2.64e-07!97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=2.08193501236232,7.32848356042658,5.91499011206397,7.56160528267075,10.0179145989269,2.35030980676646,2.80335168714631,4.9066862907799,13.3749286044083,10.7669682108117,1.02730780935303,0.797721589953364,6.50562773738582,4.80812213304486,0,0.202475267389826,0,1.10411757875383,1.09691546884591,2.54633791078818,1.19060606211498,2.48227378002213,4.17919662622297,2.55987876469451,1.37645568640302,2.8711598205751,3.4460959692726,4.52489588640367,3.99049180858385,1.26015064879965,1.99557459589774,4.44521471421742,0.61506478758457,0,1.73310971850765,0.166234645358492,1.42918549383658,14.2300754450549,15.626706890476,8.37637990358077,72.3524730278148,24.589637458504,14.5653105909346,1.1330713617802,1.4192770370732,0.734187008646726,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,4.86569557567435,14.5072428402269,12.7715643674136,3.8588915405392,3.43840127926508,8.25075347643908,0.404632921719196,2.11596391708813,1.90149421051854,0.677689064138264,0,1.3498495759221,0.988866362566974,1.4209602298922,0.898800331555214,0.768436610643109,0.207379224616955,0.135005938331691,0.630974884054146,1.42825492201902,0.883474163806454,0.734944795289724,0.766763768145891,0,1.10115880999389,0.638436690425939,0.46081959976873,0.659431438650969,0.548925861614458,0.52091337055676,1.11673199600552,1.12552522006336,1.06958773443767,0.883885756421003,0.711858403995515,0.931997229126503,0.605809546665472,0.755715601067855,53.3350659211087,4.30211938490693,2.719885334831,2.15881276655127,1.29955283489534,0.448026887097336,1.26399978118577,2.21559419351475,2.07828803682295,2.47337702157238,1.26759077799012,2.56652954828636,0,7.11066703153331,4.97929394325792,3.29367825117628,3.0331466700887,1.25602267690966,1.8125651855302,2.22663208597237,0.867426633830679,0.913396434936424,0.922461989024234,1.65794904607885,1.05829836422134,0.502666365318702,3.46072954828123,0.433798070759735,0.884610551949874,0.647067399789637,0.662524555381181,0,7.45567044872489,0.292780797011547,0.83778682725382,2.55457055208591,3.59445373517761,4.19931911695385,3.55796635804581,0.748953197024114,0.915001205637253,0.251308704225729,0.869121600961382,1.02286182932132,0.41557608911912,0.648965052271031,1.62942982160506,0.622034853050465,0.758168275301024,0.841767423545896,1.17108398666433,1.14951052216736,0.900310649026746,1.20563854268572,1.7009124787832,1.15302348256365,0.749613796477831,1.29351685369508,1.29340795759705,1.32374256117473,0.879755620819744,0.876782929710299,1.11218899690239,0.696504333044333,1.64625709126355,1.99034266818493,3.51106593656617,2.31613116403244,3.9782889915383,1.24275463521301,0.703578179943289,0.540186184383045,1.18372367792605,0.196764231747404,0.925602677324269,0.465067889500816,0.804820204198858,0.700592054203017,0.493679549740441,0.656669856316381,0.56748166682099,0.730999937126662,0.658650345873152,0.671032093801859,0.630869845692382,0.411618449517138,3.30418782983798,1.05780226665418,1.70630600428187,2.55460339046482,0.902072229254653,0.403367049246685,0.889512175379481,0.760902504450237,1.42358718463353,1.31759163779209,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,0.648414149624083,1.7922714592893,2.0863469104839,0.571242563048644,1.1270773567308,0.203651327845314,0.969762435838129,1.26244475802573,0.758838445491087,0.885660887877613,0.470996183524124,0.616985819609003,2.37162101669719,0.667380422864376,0.589676985339609,1.12431056192427,0.202860121388503,0.241177159752417,1.2731292589071,0.287696137450811,0.810676133875177,0.549122826376163,0,0.744281895337007,1.24815069245824,1.01031551178845,0.717589654087649,0.964887042726734,0.923765950833023,0.757965647081939,1.46668478797823,1.52770577197669,0.704070744865506,0.837531287209079,1.90434912708811,0.975668239288994,0.788175720530955,0.664394068946325,0.318909537314974,1.63863314715738,0.345369963731791,1.15719246865209,3.01582567878545,1.08781136763742,1.96705709207614,0.827810238914197,1.28440471990234,1.28932855251423,2.78689407140348,2.01976741763498,2.52406575533005,1.95219372148319,4.52389135238878,3.82350076724083,5.56996685205985,1.98153571552183,2.42886421004937,5.26060544240361,2.76701444562566,0.321321316421807,0.851640511249612,1.06839362200353,0.81443479676788,1.15479086080775,1.32745138339963,1.21390318077491,0.302323556964751,0.943025398779491,0.590603785761546,1.84461088766356,1.03371317267288,0.727067458955011,0.712994756769443,0.632073515871632,0,0,2.38307724027652,1.62054984628179,1.55230420539305,0.857348140126369,1.41872186913819,1.24858172321449,0.987294123612726,1.8267896946876,1.40803024838226,5.08396970073168,0.220528398054962,0.49465875882444,0.484393280087717,0.603129249281559,1.07435109602823,0.328281799490123,1.45740418314925,1.48340241608408,1.36696704638282,0.82554747185289,1.29636169158798,0.565105371014073,0.820165366326151,0.457556346413045,1.86976272993241,5.17820373597535,3.04039942369732,0.954670618015114,1.26534397432454,1.42323626988794,1.08005340821801,0.836353184057875,0.436725127492355,0.809186078308924,0.991841468704031,1.04702376793612,2.20345454596048,1.86401793926078,2.25477175473676,2.24274819065968,2.64733584731356,2.72231663681667,2.71235629303235,3.04121025883401,2.8165737274981,2.21347454234715,2.51662426621706,1.93267296660805,1.44015003128933,2.21207784439725,2.02725215290164,0.924398614483445,1.55904987573354,1.43221356533985,1.98681354781265,0.841368146639782,1.18151621739662,1.71642964911851,1.5241361331,1.81487133246313,1.94915761479505,1.05833025804362,1.75315353272353,1.13365191807606,2.44184548711471,1.70456327558004,1.84673078000486,0.579568782096571,0.563047426353546,1.46521299413812,2.14368379079066,0.501572104035363,0.564751842617067,1.38097570952153,0,0.68741272937475,0.685082519770642,0.755393897389701,0,0,0.453142408984205,1.03552062350364,1.14166082342594,1.99512436700516,1.19513524027894,1.21553358534147,0.419226325255965,1.10306105070008,0.666740183404846,0.824140228955577,0.962757628775446,1.01078884705519,0.760437899670719,0.377252682772152,0.280924522409647,0.576226371643824,0.689225627467359,0,0.231768651889711,0.77163688185482,0,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,1.45346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.711810108745045,0.689531376628944,0.409231043169689,1.23949472948773,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,1.32354851471709,0.695603506861264
|phase1_expression=2.08193501236232,7.32848356042658,5.91499011206397,7.56160528267075,10.0179145989269,2.35030980676646,2.80335168714631,4.9066862907799,13.3749286044083,10.7669682108117,1.02730780935303,0.797721589953364,6.50562773738582,4.80812213304486,0,0.202475267389826,0,1.10411757875383,1.09691546884591,2.54633791078818,1.19060606211498,2.48227378002213,4.17919662622297,2.55987876469451,1.37645568640302,2.8711598205751,3.4460959692726,4.52489588640367,3.99049180858385,1.26015064879965,1.99557459589774,4.44521471421742,0.61506478758457,0,1.73310971850765,0.166234645358492,1.42918549383658,14.2300754450549,15.626706890476,8.37637990358077,72.3524730278148,24.589637458504,14.5653105909346,1.1330713617802,1.4192770370732,0.734187008646726,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,4.86569557567435,14.5072428402269,12.7715643674136,3.8588915405392,3.43840127926508,8.25075347643908,0.404632921719196,2.11596391708813,1.90149421051854,0.677689064138264,0,1.3498495759221,0.988866362566974,1.4209602298922,0.898800331555214,0.768436610643109,0.207379224616955,0.135005938331691,0.630974884054146,1.42825492201902,0.883474163806454,0.734944795289724,0.766763768145891,0,1.10115880999389,0.638436690425939,0.46081959976873,0.659431438650969,0.548925861614458,0.52091337055676,1.11673199600552,1.12552522006336,1.06958773443767,0.883885756421003,0.711858403995515,0.931997229126503,0.605809546665472,0.755715601067855,53.3350659211087,4.30211938490693,2.719885334831,2.15881276655127,1.29955283489534,0.448026887097336,1.26399978118577,2.21559419351475,2.07828803682295,2.47337702157238,1.26759077799012,2.56652954828636,0,7.11066703153331,4.97929394325792,3.29367825117628,3.0331466700887,1.25602267690966,1.8125651855302,2.22663208597237,0.867426633830679,0.913396434936424,0.922461989024234,1.65794904607885,1.05829836422134,0.502666365318702,3.46072954828123,0.433798070759735,0.884610551949874,0.647067399789637,0.662524555381181,0,7.45567044872489,0.292780797011547,0.83778682725382,2.55457055208591,3.59445373517761,4.19931911695385,3.55796635804581,0.748953197024114,0.915001205637253,0.251308704225729,0.869121600961382,1.02286182932132,0.41557608911912,0.648965052271031,1.62942982160506,0.622034853050465,0.758168275301024,0.841767423545896,1.17108398666433,1.14951052216736,0.900310649026746,1.20563854268572,1.7009124787832,1.15302348256365,0.749613796477831,1.29351685369508,1.29340795759705,1.32374256117473,0.879755620819744,0.876782929710299,1.11218899690239,0.696504333044333,1.64625709126355,1.99034266818493,3.51106593656617,2.31613116403244,3.9782889915383,1.24275463521301,0.703578179943289,0.540186184383045,1.18372367792605,0.196764231747404,0.925602677324269,0.465067889500816,0.804820204198858,0.700592054203017,0.493679549740441,0.656669856316381,0.56748166682099,0.730999937126662,0.658650345873152,0.671032093801859,0.630869845692382,0.411618449517138,3.30418782983798,1.05780226665418,1.70630600428187,2.55460339046482,0.902072229254653,0.403367049246685,0.889512175379481,0.760902504450237,1.42358718463353,1.31759163779209,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,0.648414149624083,1.7922714592893,2.0863469104839,0.571242563048644,1.1270773567308,0.203651327845314,0.969762435838129,1.26244475802573,0.758838445491087,0.885660887877613,0.470996183524124,0.616985819609003,2.37162101669719,0.667380422864376,0.589676985339609,1.12431056192427,0.202860121388503,0.241177159752417,1.2731292589071,0.287696137450811,0.810676133875177,0.549122826376163,0,0.744281895337007,1.24815069245824,1.01031551178845,0.717589654087649,0.964887042726734,0.923765950833023,0.757965647081939,1.46668478797823,1.52770577197669,0.704070744865506,0.837531287209079,1.90434912708811,0.975668239288994,0.788175720530955,0.664394068946325,0.318909537314974,1.63863314715738,0.345369963731791,1.15719246865209,3.01582567878545,1.08781136763742,1.96705709207614,0.827810238914197,1.28440471990234,1.28932855251423,2.78689407140348,2.01976741763498,2.52406575533005,1.95219372148319,4.52389135238878,3.82350076724083,5.56996685205985,1.98153571552183,2.42886421004937,5.26060544240361,2.76701444562566,0.321321316421807,0.851640511249612,1.06839362200353,0.81443479676788,1.15479086080775,1.32745138339963,1.21390318077491,0.302323556964751,0.943025398779491,0.590603785761546,1.84461088766356,1.03371317267288,0.727067458955011,0.712994756769443,0.632073515871632,0,0,2.38307724027652,1.62054984628179,1.55230420539305,0.857348140126369,1.41872186913819,1.24858172321449,0.987294123612726,1.8267896946876,1.40803024838226,5.08396970073168,0.220528398054962,0.49465875882444,0.484393280087717,0.603129249281559,1.07435109602823,0.328281799490123,1.45740418314925,1.48340241608408,1.36696704638282,0.82554747185289,1.29636169158798,0.565105371014073,0.820165366326151,0.457556346413045,1.86976272993241,5.17820373597535,3.04039942369732,0.954670618015114,1.26534397432454,1.42323626988794,1.08005340821801,0.836353184057875,0.436725127492355,0.809186078308924,0.991841468704031,1.04702376793612,2.20345454596048,1.86401793926078,2.25477175473676,2.24274819065968,2.64733584731356,2.72231663681667,2.71235629303235,3.04121025883401,2.8165737274981,2.21347454234715,2.51662426621706,1.93267296660805,1.44015003128933,2.21207784439725,2.02725215290164,0.924398614483445,1.55904987573354,1.43221356533985,1.98681354781265,0.841368146639782,1.18151621739662,1.71642964911851,1.5241361331,1.81487133246313,1.94915761479505,1.05833025804362,1.75315353272353,1.13365191807606,2.44184548711471,1.70456327558004,1.84673078000486,0.579568782096571,0.563047426353546,1.46521299413812,2.14368379079066,0.501572104035363,0.564751842617067,1.38097570952153,0,0.68741272937475,0.685082519770642,0.755393897389701,0,0,0.453142408984205,1.03552062350364,1.14166082342594,1.99512436700516,1.19513524027894,1.21553358534147,0.419226325255965,1.10306105070008,0.666740183404846,0.824140228955577,0.962757628775446,1.01078884705519,0.760437899670719,0.377252682772152,0.280924522409647,0.576226371643824,0.689225627467359,0,0.231768651889711,0.77163688185482,0,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,1.45346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.711810108745045,0.689531376628944,0.409231043169689,1.23949472948773,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,1.32354851471709,0.695603506861264
|short_description=p2@Pramef8
|short_description=p2@Pramef8
}}
}}

Revision as of 20:53, 18 April 2012

Short description:p2@Pramef8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pramef8_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000126398, ENSMUST00000155157_5end
EntrezGene:Pramef8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pramef8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G972.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H224.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.77
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G353.34
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:143002905..143002917,%2B&oldid=952902"