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FFCP PHASE1:Mm9::chr3:146162814..146162850,+: Difference between revisions

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|description=CAGE_peak_1_at_Gm13342_5end,CAGE_peak_1_at_Gm15776_5end,CAGE_peak_1_at_Gm4356_5end,CAGE_peak_1_at_Gng5_5end,CAGE_peak_1_at_LOC100048410_5end
|description=CAGE_peak_1_at_Gm13342_5end,CAGE_peak_1_at_Gm15776_5end,CAGE_peak_1_at_Gm4356_5end,CAGE_peak_1_at_Gng5_5end,CAGE_peak_1_at_LOC100048410_5end
|id=chr3:146162814..146162850,+
|id=chr3:146162814..146162850,+
|ontology_enrichment_celltype=CL:0000333!7.83e-07!10;CL:0000095!7.83e-07!10;CL:0000243!7.83e-07!10;CL:0000123!7.83e-07!10;CL:0000125!7.83e-07!10;CL:0000030!7.83e-07!10;CL:0000339!7.83e-07!10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=50.4468868380101,131.563728680039,129.674783226018,57.7706643596045,66.6191320828642,97.537856980808,89.2400287074908,88.965969851246,62.51019263534,64.8358737911922,80.6436630342128,83.9203112630939,66.7682846731702,81.7380762617626,39.9731714178795,53.2509953235242,50.3684552252266,52.3667194494675,48.5385094964315,60.6877202071183,81.5565152548759,98.7944964448809,85.9347306267097,119.994317095055,131.451518051488,198.110027619682,182.212324375289,147.166851924462,153.53892292075,146.42950539052,200.666112143051,43.8171164687146,28.2929802288902,15.8481681015439,79.7230470513518,116.364251750945,87.5886538365563,203.406372538137,282.843394717616,184.280357878777,281.174651278825,273.901239468337,273.342328756539,77.3006462370045,79.986398732197,84.7985994986969,416.232195193157,166.353194318281,308.219714376464,219.511356054866,139.426475938861,189.753384961762,52.5159556960715,60.2050577869416,43.6921938885203,188.571166614349,139.541785250175,175.844183466608,52.804596284355,27.5075309221457,39.9313784208893,242.951529493568,166.298126872783,313.165101613927,227.439263390404,289.165406783063,211.817278136512,251.662989985618,65.3244557543409,56.297476284315,64.7800880962257,51.7028281770884,43.7319711084195,55.2433504459443,43.5138438422793,50.5570332635512,9.91042928994498,17.4931653176707,16.1286859919056,41.2804080595507,31.2887741120241,33.3384557156326,28.7558488971422,18.0084035210138,23.5309301576288,28.2843442054721,27.7624777558251,40.6350791899155,132.823743106405,110.107763075587,62.6107295595624,117.017647269469,127.154639403349,112.258263860666,96.166909782255,91.8455118549538,116.147535448959,85.0447309664508,145.739948582209,138.155773633543,75.0695427409707,59.0301796105862,53.5091003383956,42.6640021891999,234.243306374134,220.676442828811,196.143484665736,90.2052649780574,52.0465146130815,60.119066321254,99.0601215834636,78.2476279262203,83.7134255039492,74.1555391518903,55.0315149395098,81.5576177729594,76.8776349653903,79.0958482351917,66.3457913962406,85.7364304721269,77.5153729795981,66.9127849326607,87.6041277725174,12.296793474485,10.8912287542997,98.0955092000991,75.3637133142238,80.3869659531166,74.8443637460351,16.7765516133401,13.7250180845588,27.6439574648302,14.0797699355744,15.0872119824895,19.1165000994795,17.5220564113178,72.7133057891258,73.524519630565,140.513853689123,54.5044406745968,98.371054879804,98.1681985930929,86.4298223065676,80.3256679064361,50.3470093719826,47.4020765053944,62.4053485567794,52.2580808892812,104.766044565361,74.5077955861208,65.1019159406611,82.4175953927681,63.9508673218875,57.4616074761575,73.4642226976358,105.68719568062,54.0704154231191,64.0796288715641,60.2426618718656,134.631752148076,152.207412927731,177.901316723483,105.588152071004,139.899368772404,141.154408291951,129.521407225977,121.527850834027,90.4931403345564,102.191666796271,79.6212200783612,75.6371993062834,80.9947930336341,93.3087989986965,77.973929299776,15.9820360908737,26.5493899938554,136.793376155292,93.3510500322311,132.238715331845,95.4492721346402,71.779175956406,73.61448648752,86.9498151433443,101.390258717994,73.5520045393993,86.6316501848297,82.1866132776881,72.61911229502,74.2813171923848,84.4890244134968,105.259230288976,83.0419109470711,83.643544320309,85.0008933816382,55.2267904798094,74.9436886470756,74.089850098033,56.8801499310484,57.7981949315712,64.6532448150657,76.3013817309081,67.8684401569903,119.470408716121,75.7476779951067,92.972404688545,80.0509120090079,88.2441528039988,85.617891712108,104.651225082164,103.570609482292,65.3404963903393,124.925443000577,57.5072826109418,77.0331761673802,106.404846532065,107.59860200547,98.4891800235298,68.0245365122348,79.8133781519732,123.548400474356,65.8378504825785,94.3782676910046,90.1210553427848,72.3627032148644,90.2185398957992,96.2008883938948,60.5318953367773,66.88233627393,74.9437412690189,78.162801119407,91.1776704251929,76.9532991653642,113.093462954454,286.63829537246,105.237554426074,70.6398070540115,19.266070798535,20.74646852682,73.2789205833739,136.586771617566,92.128400069547,80.8208200694042,61.3956683538477,75.2751713550539,62.6064274171527,60.2953010580213,70.4370620914316,72.4794527620054,53.3638500227807,13.1741739732941,65.5763193662201,89.2108674372949,68.0867490097948,69.1224815254924,67.7000205533811,121.390318077491,112.766686747852,115.049098651098,97.7449265435358,76.243916690094,43.9328098385976,68.7078748712485,68.0909992714818,59.0988737339976,81.172328602749,100.041476950741,42.2145111134697,106.776228760567,112.542054890996,100.524069429817,71.1134336905517,82.4063937321566,72.7306671061375,61.1974547720345,99.0314608028858,106.339699573638,107.397329852766,49.1361033765611,48.2778635820758,61.8810609762879,48.8232886972828,43.004915733206,83.3635192761373,23.9198639593557,49.0399427889837,77.3950754862084,71.299893037339,41.6294289980367,34.0368627025353,39.1210676183154,69.1812210074991,62.9781535456461,59.8405886573155,176.614064332796,87.783238218765,65.875507349099,90.4004702678477,91.1624970623084,89.5286511359328,79.4351000206594,67.6931802390501,104.440620851628,100.321989327848,83.880807266735,248.588585959728,97.6343045667182,112.346315020369,88.4752906965417,98.0323060195979,92.0810883924741,63.6076233459987,90.6222518513893,88.1867086620228,132.871266454303,150.351663266606,46.4536347323422,101.159882429792,93.5696819771576,93.6729133669902,80.2039596590317,60.5978132082858,59.8573338609445,60.9957747231004,50.0793591742812,44.8858091197949,56.4626636766307,57.1103181134949,46.5665313539195,39.2706391330072,109.510775286147,109.439075013414,120.754850996354,114.497308360302,55.0590342991743,117.48922963244,97.9861189829868,148.771655080872,74.7342435012691,7.90652579663893,9.20650473014354,12.6037012956667,27.1528028103026,12.3314853558716,12.0863023582352,12.1504050041725,6.75481804836331,9.9691329976525,10.3552062350364,140.528068628975,75.4157010727949,80.9277291274596,73.1751218375565,92.8586310441962,84.3841703785565,73.5636669023346,63.6648326868183,65.4675187567303,71.7660081409185,55.005008076182,66.9623511920571,83.1536586332556,71.5801203886438,66.9697568022451,89.0669202699348,78.8013416425017,72.5338668943531,67.9941736325456,56.5243853316086,65.1451579532289,72.055177300691,72.2461655540382,67.4407373174004,56.936175151275,74.291625728892,66.9516380714348,56.8230576705741,69.6675104029271,56.1142271657738,78.4177469800791,88.0630072437537,45.4246457918355,66.7777785511513,78.1271774473623,60.7039704389209,73.4545250518582,56.7259582687508,64.0815912430625,86.2512448757306,86.950438357658
|phase1_expression=50.4468868380101,131.563728680039,129.674783226018,57.7706643596045,66.6191320828642,97.537856980808,89.2400287074908,88.965969851246,62.51019263534,64.8358737911922,80.6436630342128,83.9203112630939,66.7682846731702,81.7380762617626,39.9731714178795,53.2509953235242,50.3684552252266,52.3667194494675,48.5385094964315,60.6877202071183,81.5565152548759,98.7944964448809,85.9347306267097,119.994317095055,131.451518051488,198.110027619682,182.212324375289,147.166851924462,153.53892292075,146.42950539052,200.666112143051,43.8171164687146,28.2929802288902,15.8481681015439,79.7230470513518,116.364251750945,87.5886538365563,203.406372538137,282.843394717616,184.280357878777,281.174651278825,273.901239468337,273.342328756539,77.3006462370045,79.986398732197,84.7985994986969,416.232195193157,166.353194318281,308.219714376464,219.511356054866,139.426475938861,189.753384961762,52.5159556960715,60.2050577869416,43.6921938885203,188.571166614349,139.541785250175,175.844183466608,52.804596284355,27.5075309221457,39.9313784208893,242.951529493568,166.298126872783,313.165101613927,227.439263390404,289.165406783063,211.817278136512,251.662989985618,65.3244557543409,56.297476284315,64.7800880962257,51.7028281770884,43.7319711084195,55.2433504459443,43.5138438422793,50.5570332635512,9.91042928994498,17.4931653176707,16.1286859919056,41.2804080595507,31.2887741120241,33.3384557156326,28.7558488971422,18.0084035210138,23.5309301576288,28.2843442054721,27.7624777558251,40.6350791899155,132.823743106405,110.107763075587,62.6107295595624,117.017647269469,127.154639403349,112.258263860666,96.166909782255,91.8455118549538,116.147535448959,85.0447309664508,145.739948582209,138.155773633543,75.0695427409707,59.0301796105862,53.5091003383956,42.6640021891999,234.243306374134,220.676442828811,196.143484665736,90.2052649780574,52.0465146130815,60.119066321254,99.0601215834636,78.2476279262203,83.7134255039492,74.1555391518903,55.0315149395098,81.5576177729594,76.8776349653903,79.0958482351917,66.3457913962406,85.7364304721269,77.5153729795981,66.9127849326607,87.6041277725174,12.296793474485,10.8912287542997,98.0955092000991,75.3637133142238,80.3869659531166,74.8443637460351,16.7765516133401,13.7250180845588,27.6439574648302,14.0797699355744,15.0872119824895,19.1165000994795,17.5220564113178,72.7133057891258,73.524519630565,140.513853689123,54.5044406745968,98.371054879804,98.1681985930929,86.4298223065676,80.3256679064361,50.3470093719826,47.4020765053944,62.4053485567794,52.2580808892812,104.766044565361,74.5077955861208,65.1019159406611,82.4175953927681,63.9508673218875,57.4616074761575,73.4642226976358,105.68719568062,54.0704154231191,64.0796288715641,60.2426618718656,134.631752148076,152.207412927731,177.901316723483,105.588152071004,139.899368772404,141.154408291951,129.521407225977,121.527850834027,90.4931403345564,102.191666796271,79.6212200783612,75.6371993062834,80.9947930336341,93.3087989986965,77.973929299776,15.9820360908737,26.5493899938554,136.793376155292,93.3510500322311,132.238715331845,95.4492721346402,71.779175956406,73.61448648752,86.9498151433443,101.390258717994,73.5520045393993,86.6316501848297,82.1866132776881,72.61911229502,74.2813171923848,84.4890244134968,105.259230288976,83.0419109470711,83.643544320309,85.0008933816382,55.2267904798094,74.9436886470756,74.089850098033,56.8801499310484,57.7981949315712,64.6532448150657,76.3013817309081,67.8684401569903,119.470408716121,75.7476779951067,92.972404688545,80.0509120090079,88.2441528039988,85.617891712108,104.651225082164,103.570609482292,65.3404963903393,124.925443000577,57.5072826109418,77.0331761673802,106.404846532065,107.59860200547,98.4891800235298,68.0245365122348,79.8133781519732,123.548400474356,65.8378504825785,94.3782676910046,90.1210553427848,72.3627032148644,90.2185398957992,96.2008883938948,60.5318953367773,66.88233627393,74.9437412690189,78.162801119407,91.1776704251929,76.9532991653642,113.093462954454,286.63829537246,105.237554426074,70.6398070540115,19.266070798535,20.74646852682,73.2789205833739,136.586771617566,92.128400069547,80.8208200694042,61.3956683538477,75.2751713550539,62.6064274171527,60.2953010580213,70.4370620914316,72.4794527620054,53.3638500227807,13.1741739732941,65.5763193662201,89.2108674372949,68.0867490097948,69.1224815254924,67.7000205533811,121.390318077491,112.766686747852,115.049098651098,97.7449265435358,76.243916690094,43.9328098385976,68.7078748712485,68.0909992714818,59.0988737339976,81.172328602749,100.041476950741,42.2145111134697,106.776228760567,112.542054890996,100.524069429817,71.1134336905517,82.4063937321566,72.7306671061375,61.1974547720345,99.0314608028858,106.339699573638,107.397329852766,49.1361033765611,48.2778635820758,61.8810609762879,48.8232886972828,43.004915733206,83.3635192761373,23.9198639593557,49.0399427889837,77.3950754862084,71.299893037339,41.6294289980367,34.0368627025353,39.1210676183154,69.1812210074991,62.9781535456461,59.8405886573155,176.614064332796,87.783238218765,65.875507349099,90.4004702678477,91.1624970623084,89.5286511359328,79.4351000206594,67.6931802390501,104.440620851628,100.321989327848,83.880807266735,248.588585959728,97.6343045667182,112.346315020369,88.4752906965417,98.0323060195979,92.0810883924741,63.6076233459987,90.6222518513893,88.1867086620228,132.871266454303,150.351663266606,46.4536347323422,101.159882429792,93.5696819771576,93.6729133669902,80.2039596590317,60.5978132082858,59.8573338609445,60.9957747231004,50.0793591742812,44.8858091197949,56.4626636766307,57.1103181134949,46.5665313539195,39.2706391330072,109.510775286147,109.439075013414,120.754850996354,114.497308360302,55.0590342991743,117.48922963244,97.9861189829868,148.771655080872,74.7342435012691,7.90652579663893,9.20650473014354,12.6037012956667,27.1528028103026,12.3314853558716,12.0863023582352,12.1504050041725,6.75481804836331,9.9691329976525,10.3552062350364,140.528068628975,75.4157010727949,80.9277291274596,73.1751218375565,92.8586310441962,84.3841703785565,73.5636669023346,63.6648326868183,65.4675187567303,71.7660081409185,55.005008076182,66.9623511920571,83.1536586332556,71.5801203886438,66.9697568022451,89.0669202699348,78.8013416425017,72.5338668943531,67.9941736325456,56.5243853316086,65.1451579532289,72.055177300691,72.2461655540382,67.4407373174004,56.936175151275,74.291625728892,66.9516380714348,56.8230576705741,69.6675104029271,56.1142271657738,78.4177469800791,88.0630072437537,45.4246457918355,66.7777785511513,78.1271774473623,60.7039704389209,73.4545250518582,56.7259582687508,64.0815912430625,86.2512448757306,86.950438357658
|short_description=p1@Gm13342,p1@Gm15776,p1@Gm4356,p1@Gng5,p1@LOC100048410
|short_description=p1@Gm13342,p1@Gm15776,p1@Gm4356,p1@Gng5,p1@LOC100048410
}}
}}

Revision as of 18:45, 18 April 2012

Short description:p1@Gm13342, p1@Gm15776, p1@Gm4356, p1@Gng5, p1@LOC100048410
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm13342_5end, CAGE_peak_1_at_Gm15776_5end, CAGE_peak_1_at_Gm4356_5end, CAGE_peak_1_at_Gng5_5end, CAGE_peak_1_at_LOC100048410_5end
Coexpression cluster:NA
Association with transcript: -3bp_to_ENSMUST00000118280_5end
EntrezGene:100041703,100043318,100043507,100048410,14707
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm13342p1@Gm15776p1@Gm4356p1@Gng5p1@LOC100048410

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G750.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5131.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6129.67
CD326+ enterocyte, pool1.CNhs13542.11848-124I357.77
CD326+ enterocyte, pool2.CNhs13197.11849-124I466.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I797.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I889.24
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E988.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E762.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F264.84
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E680.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F183.92
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E466.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E881.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A353.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A550.37
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A252.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A448.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A660.69
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A381.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H298.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I985.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1119.99
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2131.45
GP2+ M cell, pool1.CNhs13228.11845-124H9198.11
GP2+ M cell, pool2.CNhs13231.11846-124I1182.21
GP2+ M cell, pool3.CNhs13240.11847-124I2147.17
Ileum epithelium, pool1.CNhs13199.10252-104B9153.54
Ileum epithelium, pool2.CNhs13232.10253-104C1146.43
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8200.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G628.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F579.72
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6116.36
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F787.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8203.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1282.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3184.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9281.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2273.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4273.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D877.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D979.99
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B384.80
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7416.23
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2166.35
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8308.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3219.51
Mouse Astrocytes, donor2.CNhs12078.11552-120C4139.43
Mouse Astrocytes, donor3.CNhs12107.11633-122C4189.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A252.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I960.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A143.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1188.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1139.54
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5175.84
Mouse Granule cells, donor1.CNhs12131.11713-123C352.80
Mouse Granule cells, donor2.CNhs12357.11731-123E327.51
Mouse Granule cells, donor3.CNhs12108.11636-122C739.93
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6242.95
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1166.30
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7313.17
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7227.44
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2289.17
Mouse Microglia, donor1.CNhs12629.11718-123C8211.82
Mouse Microglia, donor2.CNhs12634.11736-123E8251.66
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D565.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F556.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D964.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F151.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D255.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F243.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D650.56
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D833.34
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.64
Mouse Schwann, donor1.CNhs12507.11728-123D9132.82
Mouse Schwann, donor2.CNhs12573.11746-123F9110.11
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G362.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7117.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C4127.15
Mouse hepatocyte, donor3.CNhs12615.11637-122C8112.26
Mouse hepatocyte, donor6.CNhs13090.11822-124F496.17
Mouse hepatocyte, donor8.CNhs13091.11824-124F691.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7116.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I785.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3145.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8138.16
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G675.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H159.03
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1234.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2220.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3196.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B690.21
accessory axillary lymph node, adult.CNhs10475.1063-29H952.05
adrenal gland, adult.CNhs10508.49-24D760.12
adrenal gland, embryo E14.CNhs11038.406-44C599.06
adrenal gland, embryo E16.CNhs11004.1254-43D678.25
adrenal gland, embryo E17.CNhs11043.1263-45I183.71
adrenal gland, embryo E18.CNhs11026.1262-18F574.16
adrenal gland, neonate N00.CNhs11191.1311-23C155.03
adrenal gland, neonate N25.CNhs11223.1377-27I381.56
amnion, adult pregnant day17.5.CNhs10488.583-22A876.88
aorta, adult.CNhs10498.46-23H179.10
bone (os femoris), adult.CNhs10483.56-12G266.35
bone (os femoris), neonate N02.CNhs11227.1985-43F585.74
bone (os femoris), neonate N16.CNhs11225.1525-43A677.52
bone (os femoris), neonate N20.CNhs11195.1350-25C366.91
cecum, adult.CNhs10467.37-13H487.60
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H798.10
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C775.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D180.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D474.84
corpora quadrigemina, adult.CNhs10501.16-22A416.78
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F127.64
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B172.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A273.52
epididymis, adult.CNhs10490.58-23B2140.51
eyeball, adult.CNhs10484.31-12G454.50
eyeball, embryo E12.CNhs11016.345-16C698.37
eyeball, embryo E14.CNhs10521.399-16E298.17
eyeball, embryo E15.CNhs10593.426-16C986.43
eyeball, embryo E17.CNhs11023.1261-18D480.33
eyeball, neonate N00.CNhs11207.633-15C650.35
eyeball, neonate N01.CNhs11140.1532-43E747.40
eyeball, neonate N02.CNhs11205.1551-44G862.41
eyeball, neonate N16.CNhs11188.777-19A252.26
forelimb, embryo E11.CNhs10596.335-25E2104.77
forelimb, embryo E12.CNhs10600.359-14H274.51
forelimb, embryo E13.CNhs10589.384-1E265.10
forelimb, embryo E14.CNhs10577.413-26A882.42
forelimb, embryo E15.CNhs11007.437-20E763.95
forelimb, embryo E17.CNhs10598.1517-43C457.46
forelimb, embryo E18.CNhs11008.1520-43B573.46
gonad, embryo E13.CNhs11044.1564-45I6105.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C854.07
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D264.08
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D560.24
heart, embryo E11.CNhs10586.331-24E9134.63
heart, embryo E12.CNhs11015.353-12F5152.21
heart, embryo E13.CNhs11013.376-3I9177.90
heart, embryo E14.CNhs10597.403-26D4105.59
heart, embryo E15.CNhs11017.431-16C8139.90
heart, embryo E16.CNhs11021.457-17C6141.15
heart, embryo E17.CNhs11025.479-18E5129.52
heart, embryo E18.CNhs11030.1283-20G3121.53
heart, neonate N00.CNhs11213.639-21E390.49
heart, neonate N03.CNhs11221.1349-25I2102.19
heart, neonate N10.CNhs11118.749-24G179.62
heart, neonate N16.CNhs11209.782-15G175.64
heart, neonate N20.CNhs11127.821-26I680.99
heart, neonate N25.CNhs11196.1351-25D393.31
heart, neonate N30.CNhs11202.1390-42D277.97
hippocampus, adult.CNhs10478.13-16E815.98
hippocampus, neonate N00.CNhs11228.627-43G126.55
intestinal mucosa, adult.CNhs10506.860-29I3136.79
intestine, adult.CNhs10496.178-9A393.35
intestine, embryo E12.CNhs11019.1251-16I5132.24
intestine, embryo E13.CNhs11010.381-16D595.45
intestine, embryo E15.CNhs10602.976-16D871.78
intestine, embryo E16.CNhs10585.463-22H473.61
intestine, embryo E17.CNhs10582.482-18D386.95
intestine, embryo E18.CNhs10526.1289-20F7101.39
intestine, neonate N00.CNhs11126.644-26D173.55
intestine, neonate N01.CNhs11192.1322-23E986.63
intestine, neonate N06.CNhs11102.688-20B882.19
intestine, neonate N07.CNhs11095.720-20F272.62
intestine, neonate N10.CNhs11098.755-23A574.28
intestine, neonate N20.CNhs11187.827-18D184.49
intestine, neonate N25.CNhs11121.1352-25E3105.26
intestine, neonate N30.CNhs11131.1384-42G183.04
kidney, embryo E14.CNhs10606.411-4I983.64
kidney, embryo E15.CNhs10997.434-16F885.00
kidney, embryo E16.CNhs10584.464-22A555.23
kidney, embryo E17.CNhs11028.483-18I274.94
kidney, embryo E18.CNhs11001.1288-20C774.09
kidney, neonate N00.CNhs11214.646-21G756.88
kidney, neonate N10.CNhs11206.758-6D557.80
kidney, neonate N20.CNhs11113.832-19I164.65
kidney, neonate N25.CNhs11122.1353-25F376.30
kidney, neonate N30.CNhs11203.1385-42H167.87
liver, adult pregnant day01.CNhs10466.508-5B2119.47
liver, embryo E12.CNhs10601.355-15F875.75
liver, embryo E13.CNhs10524.378-3H692.97
liver, embryo E14.CNhs10594.409-16E180.05
liver, embryo E15.CNhs10520.433-16D788.24
liver, embryo E16.CNhs10523.462-17F585.62
liver, embryo E17.CNhs10510.481-18A3104.65
liver, embryo E18.CNhs10579.499-43G4103.57
liver, neonate N00.CNhs11117.641-24F465.34
liver, neonate N03.CNhs11123.1345-25G2124.93
liver, neonate N06.CNhs11101.684-20A857.51
liver, neonate N07.CNhs11103.716-20H277.03
liver, neonate N10.CNhs11115.751-24B9106.40
liver, neonate N20.CNhs11220.823-25A3107.60
liver, neonate N25.CNhs11198.1368-26H198.49
liver, neonate N30.CNhs11106.1382-42D168.02
lung, adult.CNhs10474.28-22B179.81
lung, embryo E12.CNhs10522.354-16G2123.55
lung, embryo E14.CNhs10604.404-26F865.84
lung, embryo E15.CNhs11020.432-17C594.38
lung, embryo E16.CNhs10998.458-17B690.12
lung, embryo E17.CNhs10605.480-44A672.36
lung, embryo E18.CNhs10583.1287-20I690.22
lung, neonate N00.CNhs11224.640-42C696.20
lung, neonate N06.CNhs11212.683-20E560.53
lung, neonate N07.CNhs11111.715-19A366.88
lung, neonate N10.CNhs11219.750-23E674.94
lung, neonate N20.CNhs11109.822-18A478.16
lung, neonate N25.CNhs11119.1359-25C791.18
lung, neonate N30.CNhs11133.1394-42H276.95
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1113.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1286.64
mammary gland, adult lactating day02.CNhs10480.595-22B6105.24
mammary gland, adult pregnant day19.CNhs10476.588-5H270.64
medulla oblongata, adult.CNhs10477.17-12C219.27
medulla oblongata, neonate N30.CNhs11200.1396-42A320.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C773.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2136.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E192.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E280.82
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E361.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D775.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D862.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D960.30
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D470.44
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D572.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D653.36
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I765.58
ovary, embryo E18.CNhs11040.505-44H789.21
ovary, neonate N00.CNhs11217.1299-22I468.09
oviduct, adult pregnant day01.CNhs10500.988-6G669.12
pancreas, adult.CNhs10486.34-16E467.70
pancreas, embryo E14.CNhs11012.405-44F4121.39
pancreas, embryo E15.CNhs11042.1556-45F2112.77
pancreas, embryo E16.CNhs11003.460-26E5115.05
pancreas, embryo E17.CNhs10599.1558-45G397.74
pancreas, embryo E18.CNhs10580.1535-43I776.24
pancreas, neonate N00.CNhs11105.645-26G943.93
pancreas, neonate N01.CNhs11138.1531-43D768.71
pancreas, neonate N02.CNhs11139.1539-43D868.09
pancreas, neonate N16.CNhs11136.787-43B659.10
pancreas, neonate N25.CNhs11094.1555-45E281.17
pancreas, neonate N30.CNhs11182.1548-44H5100.04
pituitary gland, adult.CNhs10493.21-1G842.21
pituitary gland, embryo E12.CNhs11018.346-16E6106.78
pituitary gland, embryo E13.CNhs11009.370-44C7112.54
pituitary gland, embryo E14.CNhs11037.398-44A5100.52
pituitary gland, embryo E15.CNhs10592.427-16B971.11
pituitary gland, embryo E16.CNhs11036.449-43F682.41
pituitary gland, embryo E17.CNhs11039.1265-44F572.73
pituitary gland, neonate N00.CNhs11190.1308-22E961.20
placenta, adult pregnant day10.CNhs10472.539-13I799.03
placenta, adult pregnant day17.CNhs10464.577-18G3106.34
prostate, adult.CNhs10470.859-1F8107.40
skin, adult.CNhs10492.30-1C349.14
skin, neonate N00.CNhs11124.650-25G448.28
skin, neonate N03.CNhs11215.662-22H361.88
skin, neonate N06.CNhs11097.693-20I548.82
skin, neonate N10.CNhs11108.762-6C443.00
small intestine, neonate N16.CNhs11114.790-21I183.36
spinal cord, adult.CNhs10505.24-13C923.92
spleen, adult.CNhs10465.25-2G249.04
spleen, embryo E16.CNhs11035.461-43C177.40
spleen, embryo E18.CNhs11011.1271-21F271.30
spleen, neonate N10.CNhs11116.752-24D141.63
spleen, neonate N20.CNhs11112.824-19H134.04
spleen, neonate N25.CNhs11099.1354-25G339.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C669.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C962.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D359.84
stomach, adult.CNhs10503.33-1H6176.61
stomach, embryo E12.CNhs10588.356-43E387.78
stomach, embryo E15.CNhs10603.1252-16G865.88
stomach, embryo E16.CNhs11022.459-17D490.40
stomach, embryo E17.CNhs11006.1035-18D591.16
stomach, embryo E18.CNhs10999.1286-20C689.53
stomach, neonate N03.CNhs11193.1340-24B879.44
stomach, neonate N07.CNhs11210.718-18A967.69
stomach, neonate N25.CNhs11104.1355-25E4104.44
stomach, neonate N30.CNhs11134.1386-42I1100.32
submandibular gland, adult.CNhs10469.59-29C183.88
testis, adult.CNhs10504.57-7G5248.59
testis, embryo E13.CNhs11031.389-23F597.63
testis, embryo E15.CNhs11034.443-27C5112.35
testis, embryo E16.CNhs11033.470-26G588.48
testis, embryo E17.CNhs11029.486-18I598.03
testis, embryo E18.CNhs11027.503-18G592.08
testis, neonate N00.CNhs11189.1300-22B763.61
testis, neonate N07.CNhs11222.726-26I490.62
testis, neonate N10.CNhs11204.763-44D988.19
testis, neonate N20.CNhs11110.839-18H3132.87
testis, neonate N30.CNhs11130.1391-42E2150.35
thymus, adult.CNhs10471.38-12B546.45
thymus, embryo E14.CNhs11041.402-44I4101.16
thymus, embryo E15.CNhs11005.430-45I293.57
thymus, embryo E16.CNhs11002.456-26C593.67
thymus, embryo E17.CNhs10581.478-18C180.20
thymus, embryo E18.CNhs10595.1273-19G460.60
thymus, neonate N02.CNhs11181.1541-43F859.86
thymus, neonate N03.CNhs11137.2104-43C761.00
thymus, neonate N06.CNhs11197.681-26C450.08
thymus, neonate N07.CNhs11211.713-19D344.89
thymus, neonate N10.CNhs11194.748-24E456.46
thymus, neonate N20.CNhs11186.820-7A257.11
thymus, neonate N25.CNhs11125.1362-25G746.57
thymus, neonate N30.CNhs11132.1393-42G239.27
tongue, adult.CNhs10499.32-1B4109.51
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3109.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7120.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5114.50
urinary bladder, adult.CNhs10481.879-12E455.06
uterus, adult pregnant day19.CNhs10497.590-15F5117.49
uterus, adult.CNhs10509.92-27E597.99
vagina, adult.CNhs10502.89-27D5148.77
vesicular gland, adult.CNhs10491.51-27F874.73
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I8140.53
whole body, embryo E12.CNhs10587.857-27C975.42
whole body, embryo E13.CNhs10512.372-23H280.93
whole body, embryo E14.5.CNhs10578.420-27D273.18
whole body, embryo E14.CNhs10519.395-14B192.86
whole body, embryo E16.CNhs10514.453-14F284.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G573.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G563.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G565.47
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G571.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G555.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G566.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G583.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G571.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G566.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G589.07
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G578.80
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G572.53
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G567.99
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G556.52
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G565.15
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G572.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G572.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G567.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G556.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G574.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G566.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G556.82
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G569.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G556.11
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G578.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G588.06
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G566.78
whole body, embryo E17.5.CNhs10513.490-9F978.13
whole body, embryo E17.CNhs10517.475-3I560.70
whole body, embryo E18.CNhs10516.493-3B373.45
whole body, neonate N00.CNhs10525.657-19C256.73
whole body, neonate N01.CNhs10576.659-23C664.08
whole body, neonate N06.CNhs10515.692-21D186.25
whole body, neonate N10.CNhs10518.761-6B486.95





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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