Personal tools

FFCP PHASE1:Mm9::chr3:135101990..135102017,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_11_at_Ube2d3_5end
|description=CAGE_peak_11_at_Ube2d3_5end
|id=chr3:135101990..135102017,+
|id=chr3:135101990..135102017,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=0.320297694209588,2.79180326111489,4.09499315450582,2.72217790176147,1.50268718983904,1.34303417529512,2.80335168714631,0.387369970324729,1.97104211012333,1.40438715793196,0.513653904676515,0.319088635981346,0,0.874204024189974,0.999329285446988,1.82227740650843,2.09868563438444,0.473193248037357,0.411343300817216,1.27316895539409,3.31668831589172,0.198581902401771,0.522399578277871,2.23989391910769,2.2940928106717,1.14846392823004,4.30761996159075,2.58565479223067,1.33016393619462,2.26827116783938,1.33038306393183,0.635030673459631,0,0,1.1554064790051,1.66234645358492,1.02084678131185,1.25559489221072,1.5626706890476,0,1.76469446409304,0,0.485510353031154,2.14024590558481,3.14268486780495,1.83546752161682,0.782391344348039,1.09012578190223,3.95435128922049,2.72201858703997,1.39986421625363,1.43752564364972,0.671130424230945,2.17608642603403,2.68875039313971,2.57259436035947,2.57880095944881,1.03134418455488,0.202316460859598,0.528990979272033,0,2.03306719241479,0,1.3498495759221,0.988866362566974,0.7104801149461,1.79760066311043,0.768436610643109,0.622137673850866,0.405017814995072,0.210324961351382,1.42825492201902,0.662605622854841,0,0.383381884072945,0.919218786610021,1.10115880999389,0.893811366596314,0.768032666281217,0.263772575460388,0.823388792421687,2.6045668527838,1.11673199600552,0,0.916789486660861,1.47314292736834,1.13897344639282,1.1183966749518,4.16494063332512,2.56943304363071,1.44932244350839,1.72084775396277,4.0798280022465,5.93673510801599,1.94932925234301,5.82434953226536,1.82577746171277,1.87473354835864,1.81850203222008,1.06001872353102,1.97180787687353,1.28326477414318,0,0,2.16491041011214,2.02687892380079,2.52762222507392,1.94112595522402,2.58937883647172,1.1875371125186,1.90833859442749,2.43572382649713,0.461230994512117,1.20578112442098,1.88141931417128,2.01066546127481,5.43828929015623,5.06097749219691,3.5384422077995,1.7794353494215,0.662524555381181,2.42437626567611,1.86391761218122,0.292780797011547,0,2.29911349687732,0.838705871541442,0.599902730993408,0.381210681219194,0.898743836428936,0,0.251308704225729,0.869121600961382,0,0.62336413367868,0,1.83310854930569,1.61729061793121,1.76905930903572,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,1.05493372485001,0.95251098811859,0.768682321709099,0.562210347358373,1.81092359517311,0.862271971731369,0.378212160335639,0.879755620819744,1.09597866213787,1.11218899690239,1.74126083261083,2.88094990971121,0.796137067273973,0,0.257347907114715,0.568326998791185,1.24275463521301,1.17263029990548,0.36012412292203,0.946978942340841,0.787056926989615,1.23413690309903,1.16266972375204,0.268273401399619,1.63471479314037,0.987359099480883,1.64167464079095,1.70244500046297,1.46199987425332,1.3173006917463,2.01309628140558,0.630869845692382,0.514523061896422,0.991256348951394,1.32225283331772,0.426576501070468,0.232236671860439,1.03093969057675,2.42020229548011,2.2237804384487,1.52180500890047,3.32170343081158,2.63518327558417,2.5133520880027,1.39269530428806,1.9496408711912,0.898819408654221,2.59365659849633,1.39398891278057,0.379335801906163,0.114248512609729,1.1270773567308,1.01825663922657,0.193952487167626,0.631222379012867,1.01178459398812,0.885660887877613,1.09899109488962,1.72756029490521,6.52195779591728,1.50160595144485,1.37591296579242,1.34917267430912,1.82574109249653,2.894125917029,1.52775511068852,2.30156909960649,1.94562272130042,3.29473695825698,4.31304619582064,2.60498663367952,2.18426371180192,3.03094653536534,2.15276896226295,4.82443521363367,2.58654466233247,1.13694847062291,0.977789858652155,0.509235257325564,1.64283173801951,1.00503754465089,1.90434912708811,3.70753930929818,1.41871629695572,0.8858587585951,1.43509291791738,1.63863314715738,1.38147985492716,1.59113964439663,3.01582567878545,1.63171705145613,0.983528546038072,1.10374698521893,0.481651769963376,0.586058432961016,1.3114795630134,1.00988370881749,0.94652465824877,1.56175497718655,1.29254038639679,1.43381278771531,0.445597348164788,2.26461224631066,2.42886421004937,1.46127928955656,0.395287777946524,0.321321316421807,2.2710413633323,0.35613120733451,0.81443479676788,2.47455184458803,0,1.94224508923985,0.906970670894253,0.377210159511796,0.590603785761546,2.15204603560749,2.06742634534577,0.363533729477506,0.712994756769443,0.632073515871632,3.16255825724996,1.03135543248187,0.340439605753788,0.720244376125241,0.388076051348264,0.857348140126369,1.06404140185364,0.891844088010353,1.48094118541909,1.8267896946876,3.98941903708308,3.38931313382112,2.42581237860458,5.93590510589328,4.84393280087717,2.89502039655148,2.74556391207214,3.61109979439135,2.33184669303881,0.927126510052548,1.70870880797853,2.06386867963222,0.740778109478847,2.26042148405629,1.36694227721025,3.20289442489132,1.5298058699447,1.11961161858926,2.07299960706636,0.954670618015114,0.790839983952838,1.01659733563424,1.62008011232702,4.18176592028937,1.74690050996942,3.50647300600534,3.96736587481612,3.14107130380836,3.11075935900303,0,18.0381740378941,0.299033092087958,0.496375471371293,1.55560950675238,0.774958940866387,0.506868376472335,1.29092962510329,0.781226309063701,1.04859344425711,1.93267296660805,5.47257011889944,0,1.01362607645082,0.718976700153791,0.51968329191118,1.07416017400489,0.79472541912506,0.721172697119813,0.295379054349154,0.706765149637033,0.914481679859998,0.403304740547362,0.194915761479505,0.288635524920988,1.16876902181569,3.40095575422817,3.55177525398503,1.07656627931371,4.02923079273788,2.12508553435409,3.94133198447482,2.93042598827624,4.71610433973945,3.51100472824754,1.6942555278512,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.415149390336707,1.19707462020309,0.170733605754134,0.486213434136588,1.04806581313991,0.551530525350042,1.33348036680969,1.23621034343337,2.56735367673452,0.758091635291392,1.01391719956096,1.13175804831646,1.31098110457835,1.72867911493147,1.26358031702349,0.952587382566147,1.97003354106254,1.54327376370964,0.412085900803307,0.735994600671987,0.342869252385415,1.59728225543404,1.43061713968393,0.872078499793971,1.2234219453993,1.69229215783353,0.548783918618318,1.05227884575137,0.950628796921032,1.12228454331548,1.18635018124174,1.37906275325789,1.63692417267876,1.39443157067369,1.35034627686799,1.74867404556562,2.57324769289949,1.71896843238639,2.10417165275728,1.32354851471709,1.85494268496337
|phase1_expression=0.320297694209588,2.79180326111489,4.09499315450582,2.72217790176147,1.50268718983904,1.34303417529512,2.80335168714631,0.387369970324729,1.97104211012333,1.40438715793196,0.513653904676515,0.319088635981346,0,0.874204024189974,0.999329285446988,1.82227740650843,2.09868563438444,0.473193248037357,0.411343300817216,1.27316895539409,3.31668831589172,0.198581902401771,0.522399578277871,2.23989391910769,2.2940928106717,1.14846392823004,4.30761996159075,2.58565479223067,1.33016393619462,2.26827116783938,1.33038306393183,0.635030673459631,0,0,1.1554064790051,1.66234645358492,1.02084678131185,1.25559489221072,1.5626706890476,0,1.76469446409304,0,0.485510353031154,2.14024590558481,3.14268486780495,1.83546752161682,0.782391344348039,1.09012578190223,3.95435128922049,2.72201858703997,1.39986421625363,1.43752564364972,0.671130424230945,2.17608642603403,2.68875039313971,2.57259436035947,2.57880095944881,1.03134418455488,0.202316460859598,0.528990979272033,0,2.03306719241479,0,1.3498495759221,0.988866362566974,0.7104801149461,1.79760066311043,0.768436610643109,0.622137673850866,0.405017814995072,0.210324961351382,1.42825492201902,0.662605622854841,0,0.383381884072945,0.919218786610021,1.10115880999389,0.893811366596314,0.768032666281217,0.263772575460388,0.823388792421687,2.6045668527838,1.11673199600552,0,0.916789486660861,1.47314292736834,1.13897344639282,1.1183966749518,4.16494063332512,2.56943304363071,1.44932244350839,1.72084775396277,4.0798280022465,5.93673510801599,1.94932925234301,5.82434953226536,1.82577746171277,1.87473354835864,1.81850203222008,1.06001872353102,1.97180787687353,1.28326477414318,0,0,2.16491041011214,2.02687892380079,2.52762222507392,1.94112595522402,2.58937883647172,1.1875371125186,1.90833859442749,2.43572382649713,0.461230994512117,1.20578112442098,1.88141931417128,2.01066546127481,5.43828929015623,5.06097749219691,3.5384422077995,1.7794353494215,0.662524555381181,2.42437626567611,1.86391761218122,0.292780797011547,0,2.29911349687732,0.838705871541442,0.599902730993408,0.381210681219194,0.898743836428936,0,0.251308704225729,0.869121600961382,0,0.62336413367868,0,1.83310854930569,1.61729061793121,1.76905930903572,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,1.05493372485001,0.95251098811859,0.768682321709099,0.562210347358373,1.81092359517311,0.862271971731369,0.378212160335639,0.879755620819744,1.09597866213787,1.11218899690239,1.74126083261083,2.88094990971121,0.796137067273973,0,0.257347907114715,0.568326998791185,1.24275463521301,1.17263029990548,0.36012412292203,0.946978942340841,0.787056926989615,1.23413690309903,1.16266972375204,0.268273401399619,1.63471479314037,0.987359099480883,1.64167464079095,1.70244500046297,1.46199987425332,1.3173006917463,2.01309628140558,0.630869845692382,0.514523061896422,0.991256348951394,1.32225283331772,0.426576501070468,0.232236671860439,1.03093969057675,2.42020229548011,2.2237804384487,1.52180500890047,3.32170343081158,2.63518327558417,2.5133520880027,1.39269530428806,1.9496408711912,0.898819408654221,2.59365659849633,1.39398891278057,0.379335801906163,0.114248512609729,1.1270773567308,1.01825663922657,0.193952487167626,0.631222379012867,1.01178459398812,0.885660887877613,1.09899109488962,1.72756029490521,6.52195779591728,1.50160595144485,1.37591296579242,1.34917267430912,1.82574109249653,2.894125917029,1.52775511068852,2.30156909960649,1.94562272130042,3.29473695825698,4.31304619582064,2.60498663367952,2.18426371180192,3.03094653536534,2.15276896226295,4.82443521363367,2.58654466233247,1.13694847062291,0.977789858652155,0.509235257325564,1.64283173801951,1.00503754465089,1.90434912708811,3.70753930929818,1.41871629695572,0.8858587585951,1.43509291791738,1.63863314715738,1.38147985492716,1.59113964439663,3.01582567878545,1.63171705145613,0.983528546038072,1.10374698521893,0.481651769963376,0.586058432961016,1.3114795630134,1.00988370881749,0.94652465824877,1.56175497718655,1.29254038639679,1.43381278771531,0.445597348164788,2.26461224631066,2.42886421004937,1.46127928955656,0.395287777946524,0.321321316421807,2.2710413633323,0.35613120733451,0.81443479676788,2.47455184458803,0,1.94224508923985,0.906970670894253,0.377210159511796,0.590603785761546,2.15204603560749,2.06742634534577,0.363533729477506,0.712994756769443,0.632073515871632,3.16255825724996,1.03135543248187,0.340439605753788,0.720244376125241,0.388076051348264,0.857348140126369,1.06404140185364,0.891844088010353,1.48094118541909,1.8267896946876,3.98941903708308,3.38931313382112,2.42581237860458,5.93590510589328,4.84393280087717,2.89502039655148,2.74556391207214,3.61109979439135,2.33184669303881,0.927126510052548,1.70870880797853,2.06386867963222,0.740778109478847,2.26042148405629,1.36694227721025,3.20289442489132,1.5298058699447,1.11961161858926,2.07299960706636,0.954670618015114,0.790839983952838,1.01659733563424,1.62008011232702,4.18176592028937,1.74690050996942,3.50647300600534,3.96736587481612,3.14107130380836,3.11075935900303,0,18.0381740378941,0.299033092087958,0.496375471371293,1.55560950675238,0.774958940866387,0.506868376472335,1.29092962510329,0.781226309063701,1.04859344425711,1.93267296660805,5.47257011889944,0,1.01362607645082,0.718976700153791,0.51968329191118,1.07416017400489,0.79472541912506,0.721172697119813,0.295379054349154,0.706765149637033,0.914481679859998,0.403304740547362,0.194915761479505,0.288635524920988,1.16876902181569,3.40095575422817,3.55177525398503,1.07656627931371,4.02923079273788,2.12508553435409,3.94133198447482,2.93042598827624,4.71610433973945,3.51100472824754,1.6942555278512,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.415149390336707,1.19707462020309,0.170733605754134,0.486213434136588,1.04806581313991,0.551530525350042,1.33348036680969,1.23621034343337,2.56735367673452,0.758091635291392,1.01391719956096,1.13175804831646,1.31098110457835,1.72867911493147,1.26358031702349,0.952587382566147,1.97003354106254,1.54327376370964,0.412085900803307,0.735994600671987,0.342869252385415,1.59728225543404,1.43061713968393,0.872078499793971,1.2234219453993,1.69229215783353,0.548783918618318,1.05227884575137,0.950628796921032,1.12228454331548,1.18635018124174,1.37906275325789,1.63692417267876,1.39443157067369,1.35034627686799,1.74867404556562,2.57324769289949,1.71896843238639,2.10417165275728,1.32354851471709,1.85494268496337
|short_description=p11@Ube2d3
|short_description=p11@Ube2d3
}}
}}

Revision as of 18:37, 18 April 2012

Short description:p11@Ube2d3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_Ube2d3_5end
Coexpression cluster:NA
Association with transcript: -113bp_to_uc008rlq.1_5end
EntrezGene:Ube2d3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p11@Ube2d3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D94.16
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:135101990..135102017,%2B&oldid=932481"