Personal tools

FFCP PHASE1:Mm9::chr4:55545337..55545357,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:55545337..55545357,-
|short_description=p1@Klf4
|description=CAGE_peak_1_at_Klf4_5end
|association_with_transcript=0bp_to_ENSMUST00000003116,ENSMUST00000107619,NM_010637,uc008sxk.2_5end
|EntrezGene=16600
|EntrezGene=16600
|HGNC=
|HGNC=
|UniProt=Q60793,F2YID5
|UniProt=Q60793,F2YID5
|association_with_transcript=0bp_to_ENSMUST00000003116,ENSMUST00000107619,NM_010637,uc008sxk.2_5end
|description=CAGE_peak_1_at_Klf4_5end
|id=chr4:55545337..55545357,-
|ontology_enrichment_disease=
|phase1_expression=164.633014823728,224.04221170447,277.549536027617,119.170899254891,142.254387304763,70.6771734749056,65.1779267261517,10.0716192284429,20.8367308784467,7.0219357896598,0.856089841127525,0.398860794976682,9.92964233600993,3.75907730401689,2.33176833270964,0.202475267389826,0.699561878128147,8.3597473819933,4.38766187538364,11.0341309467488,17.6890043514225,2.38298282882125,2.35079810225042,21.2789922315231,30.0526158197993,164.230341736896,92.6138291742011,91.7907451241887,86.4606558526501,93.7552082706942,42.5722580458185,0,0,0,17.6199488048278,9.47537478543406,26.9503550266327,15.4856703372656,45.3174499823804,26.6997109426637,9.99993529652724,0.683045484958446,3.39857247121808,40.1610849342091,40.8549032814644,18.5382219683298,50.0730460382745,3.92445281484804,4.61340983742391,4.86074747685709,12.8787507895334,0,65.0996511504017,17.4086914082723,18.821252751978,12.0911934936895,16.0458726365704,24.7522604293172,0.404632921719196,1.5869729378161,0,24.0579617769084,18.6751907183339,7.64914759689189,1.97773272513395,4.9733608046227,6.2916023208865,2.68952813725088,1.03689612308478,0.810035629990144,0.630974884054146,2.57085885963423,4.63823935998388,0.857435594504678,1.34183659425531,0,1.10115880999389,2.55374676170375,3.68655679814984,0.659431438650969,0.914876436024097,1.04182674111352,2.51264699101243,2.25105044012672,3.66715794664344,2.65165726926301,2.70506193518296,1.86399445825301,16.2811315666346,5.59229544790213,284.357063416346,17.2084775396277,8.15965600449301,0,1.29955283489534,2.68816132258401,11.3759980306719,9.54409806437123,4.67614808285164,9.54016851177919,40.7037483154607,29.5150898052931,15.2883143823987,56.8853362522665,13.4224445426953,12.6679932737549,16.1767822404731,26.9473956136982,10.616453229534,14.1020032111584,12.1439728736295,11.8741536541735,13.6063143381075,10.0984169170257,24.9288059127694,12.9436589069566,52.899723095156,40.7770186514151,10.6153266233985,56.133096931751,42.622413062856,32.9715172131951,115.562891955236,2.92780797011547,2.93225389538837,180.097223922057,142.220552788527,91.7851178419914,128.086788889649,4.94309110035915,4.11750542536764,1.25654352112864,4.86708096538374,3.06858548796397,5.194701113989,4.05603157669394,39.1063157185215,32.096998417404,8.84529654517861,25.6739064181498,3.6433724029557,4.59804208866946,10.9837899181263,23.2085419467001,27.7588916537418,12.0426897067759,13.2119431629218,23.2833033665114,6.03590380211958,8.69887968771969,14.7798944297717,32.4409683992811,51.16069385751,155.668718435408,165.448837671987,3.78165106955137,66.7102527947573,68.1971953853995,89.2273388102161,6.21377317606506,7.27030785941398,5.58192390529146,6.15536312521547,8.65762619688577,7.86762275725629,10.9290954032692,20.3887785063711,23.7033645005354,22.5446994381468,30.5351483187117,49.6951802516096,50.4389956617396,27.8828646419634,45.3617695410057,5.46753866266731,3.80747065803352,478.776816543523,48.9233548327557,3.83918850963421,5.57368012465052,11.5980715189884,20.5717195115809,17.5678654637448,33.2894845696978,147.578538140343,60.609215338436,60.3204501120647,56.702594531728,61.4136874425228,157.293396514489,160.806709106773,254.104264672573,15.9321036800589,6.62641373136427,7.88954149711563,5.49858585182348,6.40043207653165,16.7624609537861,9.86489979138414,9.44704947069454,7.69293766422737,11.105744752962,3.26097889795864,1.16791574001266,1.57247196090562,2.24862112384854,2.43432145666204,2.17059443777175,4.32863948028414,7.76779571117189,4.37765112292595,1.37280706594041,10.0637744569148,9.30352369171258,4.68056509671841,1.26289438973556,2.69096120282868,2.41221760681684,102.353267352299,4.73728529426212,7.65935389277522,9.33597971763535,9.15291968325158,19.9332446355761,39.9913316688503,148.496706019785,50.1279758257687,71.0901653772568,69.2033695973494,86.0282402257624,60.0943736893317,74.4942651694785,3.01582567878545,3.26343410291226,8.85175691434265,11.8652800911035,6.42202359951168,4.21962071731931,10.8197063948606,24.7421508660286,5.04813151066011,2.34263246577983,1.50796378412959,1.19484398976276,1.55959071857676,2.54768877709949,8.90583543684768,3.79932615284705,7.90575555893047,8.9969968598106,13.3423680095772,12.6426578603751,21.6639655940256,15.1772513134733,11.9470624505967,8.01176099311439,11.1859716076958,11.8821200246216,18.8993211443695,21.213025208131,56.078939617504,17.4496190149203,19.250858432775,14.5376908650475,13.7044191147498,19.5957532171555,5.44703369206061,5.58189391497062,12.8065096944927,13.5032332069903,12.5911565886014,24.4365280114837,20.0749805134588,19.790221692449,42.2409074514679,43.0019103853555,14.7754026696824,218.474285147461,326.158141925729,218.574039939637,172.970526460545,158.560109153729,141.076724928848,4.45020724825223,4.61351378154202,18.7812049846532,7.03739204004904,4.89757988212197,4.23752105935178,3.88922894451088,178.647329923542,241.696158162957,191.545163692931,452.513872939164,11.704431762502,28.0580864635051,54.0026704109006,99.3169406068726,103.722217779434,133.111109881818,180.680454215584,216.210408078808,329.610877081029,8.07741107013003,5.07323644815771,4.78452947340732,3.30916980914195,4.27792614356905,6.71631082084202,8.10989402355735,12.7919390123872,19.0098401872167,12.5831213310853,5.31485065817213,12.9613502816039,5.68820017130721,14.798940716182,11.6063381596255,4.80707045017842,5.37080087002444,5.36439657909415,3.24527713703916,2.65841148914239,4.4425237977185,3.20068587950999,2.11734988787365,2.72882066071307,2.88635524920988,2.57129184799452,325.811561255059,1.99787358036658,3.94740969081693,6.54750003819906,39.4106771825669,61.1844869970853,97.0703608616505,274.177156842125,13.5424468089548,2.82375921308533,1.38097570952153,2.86447756719698,2.92150409984269,2.74033007908257,0.755393897389701,2.70009000092722,2.2516060161211,5.43770890781046,7.7664046762773,2.80225838477277,5.58634822761443,11.6098851912811,39.8695015992002,23.0574478890781,40.4455718590031,29.7810615254164,20.6035057238894,28.2408904440797,30.5763626234195,27.8827229879264,29.2370829148418,39.3294331373506,34.4455319938197,40.549441082663,37.6272016113628,52.2638310011298,35.6882057857854,29.2580989570348,32.5309613497018,27.7724094432186,35.8501128441862,30.0429599333624,29.7960154096273,35.573345796995,37.399656688121,29.2684756596436,19.4671586464004,32.8645955506986,28.6182558545447,38.6750159084808,41.6673960448633,29.4646351082176,39.9737050259792,65.3953411226069,59.954538705107,50.7631590326536,78.8576768357255,82.2539827896027,60.8832316769863,29.9109507950344
|phase1_expression=164.633014823728,224.04221170447,277.549536027617,119.170899254891,142.254387304763,70.6771734749056,65.1779267261517,10.0716192284429,20.8367308784467,7.0219357896598,0.856089841127525,0.398860794976682,9.92964233600993,3.75907730401689,2.33176833270964,0.202475267389826,0.699561878128147,8.3597473819933,4.38766187538364,11.0341309467488,17.6890043514225,2.38298282882125,2.35079810225042,21.2789922315231,30.0526158197993,164.230341736896,92.6138291742011,91.7907451241887,86.4606558526501,93.7552082706942,42.5722580458185,0,0,0,17.6199488048278,9.47537478543406,26.9503550266327,15.4856703372656,45.3174499823804,26.6997109426637,9.99993529652724,0.683045484958446,3.39857247121808,40.1610849342091,40.8549032814644,18.5382219683298,50.0730460382745,3.92445281484804,4.61340983742391,4.86074747685709,12.8787507895334,0,65.0996511504017,17.4086914082723,18.821252751978,12.0911934936895,16.0458726365704,24.7522604293172,0.404632921719196,1.5869729378161,0,24.0579617769084,18.6751907183339,7.64914759689189,1.97773272513395,4.9733608046227,6.2916023208865,2.68952813725088,1.03689612308478,0.810035629990144,0.630974884054146,2.57085885963423,4.63823935998388,0.857435594504678,1.34183659425531,0,1.10115880999389,2.55374676170375,3.68655679814984,0.659431438650969,0.914876436024097,1.04182674111352,2.51264699101243,2.25105044012672,3.66715794664344,2.65165726926301,2.70506193518296,1.86399445825301,16.2811315666346,5.59229544790213,284.357063416346,17.2084775396277,8.15965600449301,0,1.29955283489534,2.68816132258401,11.3759980306719,9.54409806437123,4.67614808285164,9.54016851177919,40.7037483154607,29.5150898052931,15.2883143823987,56.8853362522665,13.4224445426953,12.6679932737549,16.1767822404731,26.9473956136982,10.616453229534,14.1020032111584,12.1439728736295,11.8741536541735,13.6063143381075,10.0984169170257,24.9288059127694,12.9436589069566,52.899723095156,40.7770186514151,10.6153266233985,56.133096931751,42.622413062856,32.9715172131951,115.562891955236,2.92780797011547,2.93225389538837,180.097223922057,142.220552788527,91.7851178419914,128.086788889649,4.94309110035915,4.11750542536764,1.25654352112864,4.86708096538374,3.06858548796397,5.194701113989,4.05603157669394,39.1063157185215,32.096998417404,8.84529654517861,25.6739064181498,3.6433724029557,4.59804208866946,10.9837899181263,23.2085419467001,27.7588916537418,12.0426897067759,13.2119431629218,23.2833033665114,6.03590380211958,8.69887968771969,14.7798944297717,32.4409683992811,51.16069385751,155.668718435408,165.448837671987,3.78165106955137,66.7102527947573,68.1971953853995,89.2273388102161,6.21377317606506,7.27030785941398,5.58192390529146,6.15536312521547,8.65762619688577,7.86762275725629,10.9290954032692,20.3887785063711,23.7033645005354,22.5446994381468,30.5351483187117,49.6951802516096,50.4389956617396,27.8828646419634,45.3617695410057,5.46753866266731,3.80747065803352,478.776816543523,48.9233548327557,3.83918850963421,5.57368012465052,11.5980715189884,20.5717195115809,17.5678654637448,33.2894845696978,147.578538140343,60.609215338436,60.3204501120647,56.702594531728,61.4136874425228,157.293396514489,160.806709106773,254.104264672573,15.9321036800589,6.62641373136427,7.88954149711563,5.49858585182348,6.40043207653165,16.7624609537861,9.86489979138414,9.44704947069454,7.69293766422737,11.105744752962,3.26097889795864,1.16791574001266,1.57247196090562,2.24862112384854,2.43432145666204,2.17059443777175,4.32863948028414,7.76779571117189,4.37765112292595,1.37280706594041,10.0637744569148,9.30352369171258,4.68056509671841,1.26289438973556,2.69096120282868,2.41221760681684,102.353267352299,4.73728529426212,7.65935389277522,9.33597971763535,9.15291968325158,19.9332446355761,39.9913316688503,148.496706019785,50.1279758257687,71.0901653772568,69.2033695973494,86.0282402257624,60.0943736893317,74.4942651694785,3.01582567878545,3.26343410291226,8.85175691434265,11.8652800911035,6.42202359951168,4.21962071731931,10.8197063948606,24.7421508660286,5.04813151066011,2.34263246577983,1.50796378412959,1.19484398976276,1.55959071857676,2.54768877709949,8.90583543684768,3.79932615284705,7.90575555893047,8.9969968598106,13.3423680095772,12.6426578603751,21.6639655940256,15.1772513134733,11.9470624505967,8.01176099311439,11.1859716076958,11.8821200246216,18.8993211443695,21.213025208131,56.078939617504,17.4496190149203,19.250858432775,14.5376908650475,13.7044191147498,19.5957532171555,5.44703369206061,5.58189391497062,12.8065096944927,13.5032332069903,12.5911565886014,24.4365280114837,20.0749805134588,19.790221692449,42.2409074514679,43.0019103853555,14.7754026696824,218.474285147461,326.158141925729,218.574039939637,172.970526460545,158.560109153729,141.076724928848,4.45020724825223,4.61351378154202,18.7812049846532,7.03739204004904,4.89757988212197,4.23752105935178,3.88922894451088,178.647329923542,241.696158162957,191.545163692931,452.513872939164,11.704431762502,28.0580864635051,54.0026704109006,99.3169406068726,103.722217779434,133.111109881818,180.680454215584,216.210408078808,329.610877081029,8.07741107013003,5.07323644815771,4.78452947340732,3.30916980914195,4.27792614356905,6.71631082084202,8.10989402355735,12.7919390123872,19.0098401872167,12.5831213310853,5.31485065817213,12.9613502816039,5.68820017130721,14.798940716182,11.6063381596255,4.80707045017842,5.37080087002444,5.36439657909415,3.24527713703916,2.65841148914239,4.4425237977185,3.20068587950999,2.11734988787365,2.72882066071307,2.88635524920988,2.57129184799452,325.811561255059,1.99787358036658,3.94740969081693,6.54750003819906,39.4106771825669,61.1844869970853,97.0703608616505,274.177156842125,13.5424468089548,2.82375921308533,1.38097570952153,2.86447756719698,2.92150409984269,2.74033007908257,0.755393897389701,2.70009000092722,2.2516060161211,5.43770890781046,7.7664046762773,2.80225838477277,5.58634822761443,11.6098851912811,39.8695015992002,23.0574478890781,40.4455718590031,29.7810615254164,20.6035057238894,28.2408904440797,30.5763626234195,27.8827229879264,29.2370829148418,39.3294331373506,34.4455319938197,40.549441082663,37.6272016113628,52.2638310011298,35.6882057857854,29.2580989570348,32.5309613497018,27.7724094432186,35.8501128441862,30.0429599333624,29.7960154096273,35.573345796995,37.399656688121,29.2684756596436,19.4671586464004,32.8645955506986,28.6182558545447,38.6750159084808,41.6673960448633,29.4646351082176,39.9737050259792,65.3953411226069,59.954538705107,50.7631590326536,78.8576768357255,82.2539827896027,60.8832316769863,29.9109507950344
|short_description=p1@Klf4
}}
}}

Revision as of 16:12, 18 April 2012

Short description:p1@Klf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Klf4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000003116, ENSMUST00000107619, NM_010637, uc008sxk.2_5end
EntrezGene:Klf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Klf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7164.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5224.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6277.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I3119.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I4142.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I770.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I865.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.93
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D230.05
GP2+ M cell, pool1.CNhs13228.11845-124H9164.23
GP2+ M cell, pool2.CNhs13231.11846-124I192.61
GP2+ M cell, pool3.CNhs13240.11847-124I291.79
Ileum epithelium, pool1.CNhs13199.10252-104B986.46
Ileum epithelium, pool2.CNhs13232.10253-104C193.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C842.57
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H145.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.70
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D840.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D940.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B750.07
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A265.10
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.82
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.75
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.06
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D916.28
Mouse Schwann, donor2.CNhs12573.11746-123F95.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3284.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G640.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.95
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D714.10
adrenal gland, embryo E14.CNhs11038.406-44C512.14
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I113.61
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C124.93
adrenal gland, neonate N25.CNhs11223.1377-27I312.94
amnion, adult pregnant day17.5.CNhs10488.583-22A852.90
aorta, adult.CNhs10498.46-23H140.78
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F556.13
bone (os femoris), neonate N16.CNhs11225.1525-43A642.62
bone (os femoris), neonate N20.CNhs11195.1350-25C332.97
cecum, adult.CNhs10467.37-13H4115.56
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H7180.10
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7142.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D191.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4128.09
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B139.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.10
epididymis, adult.CNhs10490.58-23B28.85
eyeball, adult.CNhs10484.31-12G425.67
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C910.98
eyeball, embryo E17.CNhs11023.1261-18D423.21
eyeball, neonate N00.CNhs11207.633-15C627.76
eyeball, neonate N01.CNhs11140.1532-43E712.04
eyeball, neonate N02.CNhs11205.1551-44G813.21
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H28.70
forelimb, embryo E13.CNhs10589.384-1E214.78
forelimb, embryo E14.CNhs10577.413-26A832.44
forelimb, embryo E15.CNhs11007.437-20E751.16
forelimb, embryo E17.CNhs10598.1517-43C4155.67
forelimb, embryo E18.CNhs11008.1520-43B5165.45
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C866.71
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D268.20
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D589.23
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C67.87
heart, embryo E17.CNhs11025.479-18E510.93
heart, embryo E18.CNhs11030.1283-20G320.39
heart, neonate N00.CNhs11213.639-21E323.70
heart, neonate N03.CNhs11221.1349-25I222.54
heart, neonate N10.CNhs11118.749-24G130.54
heart, neonate N16.CNhs11209.782-15G149.70
heart, neonate N20.CNhs11127.821-26I650.44
heart, neonate N25.CNhs11196.1351-25D327.88
heart, neonate N30.CNhs11202.1390-42D245.36
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I3478.78
intestine, adult.CNhs10496.178-9A348.92
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D811.60
intestine, embryo E16.CNhs10585.463-22H420.57
intestine, embryo E17.CNhs10582.482-18D317.57
intestine, embryo E18.CNhs10526.1289-20F733.29
intestine, neonate N00.CNhs11126.644-26D1147.58
intestine, neonate N01.CNhs11192.1322-23E960.61
intestine, neonate N06.CNhs11102.688-20B860.32
intestine, neonate N07.CNhs11095.720-20F256.70
intestine, neonate N10.CNhs11098.755-23A561.41
intestine, neonate N20.CNhs11187.827-18D1157.29
intestine, neonate N25.CNhs11121.1352-25E3160.81
intestine, neonate N30.CNhs11131.1384-42G1254.10
kidney, embryo E14.CNhs10606.411-4I915.93
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G716.76
kidney, neonate N10.CNhs11206.758-6D59.86
kidney, neonate N20.CNhs11113.832-19I19.45
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H111.11
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G47.77
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B1102.35
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F87.66
lung, embryo E15.CNhs11020.432-17C59.34
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A619.93
lung, embryo E18.CNhs10583.1287-20I639.99
lung, neonate N00.CNhs11224.640-42C6148.50
lung, neonate N06.CNhs11212.683-20E550.13
lung, neonate N07.CNhs11111.715-19A371.09
lung, neonate N10.CNhs11219.750-23E669.20
lung, neonate N20.CNhs11109.822-18A486.03
lung, neonate N25.CNhs11119.1359-25C760.09
lung, neonate N30.CNhs11133.1394-42H274.49
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H211.87
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.74
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I713.34
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I421.66
oviduct, adult pregnant day01.CNhs10500.988-6G615.18
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E511.88
pancreas, embryo E17.CNhs10599.1558-45G318.90
pancreas, embryo E18.CNhs10580.1535-43I721.21
pancreas, neonate N00.CNhs11105.645-26G956.08
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C712.81
pituitary gland, embryo E14.CNhs11037.398-44A513.50
pituitary gland, embryo E15.CNhs10592.427-16B912.59
pituitary gland, embryo E16.CNhs11036.449-43F624.44
pituitary gland, embryo E17.CNhs11039.1265-44F520.07
pituitary gland, neonate N00.CNhs11190.1308-22E919.79
placenta, adult pregnant day10.CNhs10472.539-13I742.24
placenta, adult pregnant day17.CNhs10464.577-18G343.00
prostate, adult.CNhs10470.859-1F814.78
skin, adult.CNhs10492.30-1C3218.47
skin, neonate N00.CNhs11124.650-25G4326.16
skin, neonate N03.CNhs11215.662-22H3218.57
skin, neonate N06.CNhs11097.693-20I5172.97
skin, neonate N10.CNhs11108.762-6C4158.56
small intestine, neonate N16.CNhs11114.790-21I1141.08
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C118.78
spleen, embryo E18.CNhs11011.1271-21F27.04
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6178.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9241.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3191.55
stomach, adult.CNhs10503.33-1H6452.51
stomach, embryo E12.CNhs10588.356-43E311.70
stomach, embryo E15.CNhs10603.1252-16G828.06
stomach, embryo E16.CNhs11022.459-17D454.00
stomach, embryo E17.CNhs11006.1035-18D599.32
stomach, embryo E18.CNhs10999.1286-20C6103.72
stomach, neonate N03.CNhs11193.1340-24B8133.11
stomach, neonate N07.CNhs11210.718-18A9180.68
stomach, neonate N25.CNhs11104.1355-25E4216.21
stomach, neonate N30.CNhs11134.1386-42I1329.61
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G58.11
testis, neonate N00.CNhs11189.1300-22B712.79
testis, neonate N07.CNhs11222.726-26I419.01
testis, neonate N10.CNhs11204.763-44D912.58
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E212.96
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I211.61
thymus, embryo E16.CNhs11002.456-26C54.81
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B4325.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.55
urinary bladder, adult.CNhs10481.879-12E439.41
uterus, adult pregnant day19.CNhs10497.590-15F561.18
uterus, adult.CNhs10509.92-27E597.07
vagina, adult.CNhs10502.89-27D5274.18
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H211.61
whole body, embryo E14.5.CNhs10578.420-27D239.87
whole body, embryo E14.CNhs10519.395-14B123.06
whole body, embryo E16.CNhs10514.453-14F240.45
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.88
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G539.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G540.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G537.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G552.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G535.85
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.57
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G537.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.62
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G538.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G541.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G539.97
whole body, embryo E17.5.CNhs10513.490-9F965.40
whole body, embryo E17.CNhs10517.475-3I559.95
whole body, embryo E18.CNhs10516.493-3B350.76
whole body, neonate N00.CNhs10525.657-19C278.86
whole body, neonate N01.CNhs10576.659-23C682.25
whole body, neonate N06.CNhs10515.692-21D160.88
whole body, neonate N10.CNhs10518.761-6B429.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:55545337..55545357,-&oldid=910285"