Personal tools

FFCP PHASE1:Mm9::chr3:85946515..85946558,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:85946515..85946558,-
|short_description=p1@Rps3a
|description=CAGE_peak_1_at_Rps3a_5end
|association_with_transcript=31bp_to_NM_016959,uc008prc.2_5end
|EntrezGene=20091
|EntrezGene=20091
|HGNC=
|HGNC=
|UniProt=P97351,Q564F3
|UniProt=P97351,Q564F3
|association_with_transcript=31bp_to_NM_016959,uc008prc.2_5end
|description=CAGE_peak_1_at_Rps3a_5end
|id=chr3:85946515..85946558,-
|ontology_enrichment_disease=
|phase1_expression=35.0725975159499,23.3813523118372,18.1999695755814,3.62957053568196,5.50985302940982,31.5613031194353,36.6771845734975,13.5579489613655,43.08134897841,29.0240012639272,121.393539471883,97.4018061333058,13.8672591244277,10.2281870830227,88.9403064047819,89.8990187210827,78.3509303503524,30.5998300397491,22.6238815449469,32.6780031884483,15.3928355173436,48.2554022836303,54.8519557191764,30.8785375991275,39.4583963435532,36.7508457033613,42.2146756235893,47.4036711908956,23.7529274320467,44.1052727079879,78.2708702613226,131.451349406144,154.996326471312,158.481681015439,70.7686468390623,112.374620262341,92.8970570993779,21.7636447983192,36.7227611926186,26.1761871986899,11.1763982725893,12.294818729252,18.934903768215,25.1793635951155,27.574525291708,37.443537440983,5.47673941043627,10.9012578190223,12.0827400503959,13.8045228342741,19.3181261843,8.62515386189829,18.9594344845242,10.1550699881588,10.7550015725588,64.5721184450227,36.6762803121609,30.4246534443691,18.8154308599426,17.9856932952491,9.50747105259269,23.3802727127701,9.78224275722253,5.39939830368839,5.93319817540185,4.9733608046227,5.69240209984969,6.91592949578798,32.6622278771705,23.4910332697142,29.0248446664907,13.9968982357864,25.3998822094356,29.397791811589,26.5491954720515,14.7075005857603,12.1127469099328,18.1316020080967,21.6585211891303,19.6510568717989,26.348441357494,21.3574481928272,21.4970909231063,16.8828783009504,18.7941844765476,19.4454866412621,29.4709379254143,25.1639251864156,139.487648119725,57.5855288013706,10.1452571045587,37.858650587181,46.238050692127,20.5087212822371,17.5439632710871,16.5769948226014,15.4488862144927,39.8806954832655,69.6226492335688,43.8141072392822,44.6473640692077,17.9657068380045,7.64415719119937,0,78.1532658050483,79.554997759181,67.740275631981,13.7020655662872,11.1343289968284,12.9144660986398,59.5054670807846,37.1447883540812,36.4372485664572,40.8458355897607,19.4021366773913,22.4943198480119,14.3373081285937,7.66376591675532,27.4229271104461,39.147577687273,34.4512768798214,46.5480243009813,14.9113408974498,10.2473278954042,13.6140359428746,21.7138496927303,96.5709903517717,152.975196403319,126.434875937699,16.6267609739353,16.4700217014706,28.5235379296202,15.9918374576894,17.6443665557928,19.5320761885986,19.7934340942664,31.570202793598,30.3553008288627,19.7123751578266,7.78634866779954,45.2819141510209,47.3598335132954,35.8323638312645,25.6198190320716,18.5059277691612,22.6761284904184,24.8309570083281,9.8307280880826,42.2513266148371,31.391609307858,24.6331573829528,37.2632745126877,28.0827721717854,24.3776516565517,28.1921526878883,48.5643611037123,140.442637462647,120.953516343916,91.7848103047764,45.7747957303459,45.4980556363327,41.4142741360334,29.5930919481513,32.0725697748268,30.0820870130388,21.6256568617879,28.4369805483596,25.2213139513086,28.3042941851186,19.5359282254123,13.2952847655203,13.8889988054066,15.5880581856646,12.6154033634749,21.6598647021051,33.8556174727846,3.63460661282178,44.692145766139,47.7765681198924,45.518387684646,41.7530574683582,32.0676804151115,32.4671944013511,26.6315876557583,27.0481565080372,26.3518327558417,26.6415321328286,26.0632978373908,23.2007263671753,17.9763881730844,24.8558757355898,15.5330193138406,53.486348068769,52.7828128256947,31.5581659884625,33.6024690944769,32.5840178441611,27.9140563163468,16.4414996523069,11.0707610984702,14.9148791449306,16.4118228015995,13.6368208460088,95.769090681038,96.9035845908091,108.158676057115,68.566721029314,62.9472386953808,56.2723132436938,45.7436858546789,43.7765112292596,84.5649152619291,21.5652309791032,32.3762624471598,31.2037673114561,21.9743623813987,48.2579042373944,21.2275149399882,5.91210208533135,70.3013137668498,46.4450182859774,43.4547419584482,32.3872542638133,18.2581820611579,13.3304438896168,14.0496226457615,11.6650006638581,16.6098517236581,10.3645599627367,14.0922450655535,11.569893785015,10.9933284521949,12.0633027151418,21.2123216689297,34.9152633843516,31.4567890787395,21.6743296483519,23.4423373184406,122.623339141753,17.9254358315105,40.7005603046971,51.1474755028596,21.9731865687455,31.7828501276894,28.0726329343817,24.6276581786284,21.0501564870945,29.5178416490425,21.3455400091123,11.2462460747632,18.4522110770749,19.0530195923963,31.9258440333009,12.2077890999676,13.2745138339963,61.4235009472103,73.1623007854698,102.223953227697,57.8791710046315,52.8788454463555,28.4271122485043,40.7157777014806,59.1785648118637,51.8300283014738,43.2216295157495,36.0974401368654,7.14923172082955,36.012218806262,21.2148241403717,30.2215219394545,18.4433842987965,19.6205699362278,19.5813334516524,17.3545020995322,49.0463869853155,10.8034356140548,18.9654422327267,21.2703266294509,17.2766936564619,36.4290066566061,45.0033736891824,40.7069431367752,27.9821603164657,19.284231409093,39.471173464304,43.5476291402399,69.2627532362722,76.2892250868999,67.9370311773495,59.7111032069024,63.9118896776896,66.8967942107085,46.1587912506775,17.184071124272,48.0830710243326,36.5975040828328,44.6062057594039,37.8449815786188,30.1340337969725,34.5252726745141,20.7460173870593,26.175594198403,17.7572513409756,11.1841076355647,16.9107881605257,54.4240227600083,66.6797716542103,38.8902376688095,58.3802402119345,27.5398484549968,28.7525234682097,45.0507171560067,53.4782656571125,26.5742532908607,17.2818003754719,18.0126338758062,74.4001540114903,53.9232525115343,78.7320187245438,40.1019798295158,35.7626438606277,48.6791570555874,45.045305788246,47.0503656758368,38.7130577807399,38.5156027222731,24.2670123041984,28.3824932838972,15.7783817945118,16.5513180039104,111.214962640406,99.2235254100801,116.344039140306,8.88672132548076,21.5834846768859,21.9781949120718,34.9420457898877,7.52358156053045,20.8958181768315,20.2543104063158,24.0616115644547,16.6697586873377,19.182310553578,21.9064230243013,18.2256075062588,15.7612421128477,15.406841905463,12.9440077937955,62.272408550506,22.7444177838588,50.1956800917154,37.4384344285173,42.7610851761084,37.3202322153529,26.8918540639954,25.342312040384,21.1806678330598,22.9954462705056,20.7853025909997,23.7669190146456,30.5271314351817,26.6344634004256,29.7515729190077,24.7672719467198,22.9450965370814,29.9009291718743,23.4888963457885,26.2014077839227,24.0008476669791,23.9592338315106,27.6585980338892,24.4181979942312,27.6681578421072,24.1997778570195,29.8172595782619,33.6729230640439,34.358440803003,21.3234063229941,27.5233242048084,29.1573267831668,21.2800142448238,29.7478735077055,29.7076180910958,19.2354145012218,20.5859815431959,21.0573632967332,19.7026982030909,21.6179590737125,24.3461227401443
|phase1_expression=35.0725975159499,23.3813523118372,18.1999695755814,3.62957053568196,5.50985302940982,31.5613031194353,36.6771845734975,13.5579489613655,43.08134897841,29.0240012639272,121.393539471883,97.4018061333058,13.8672591244277,10.2281870830227,88.9403064047819,89.8990187210827,78.3509303503524,30.5998300397491,22.6238815449469,32.6780031884483,15.3928355173436,48.2554022836303,54.8519557191764,30.8785375991275,39.4583963435532,36.7508457033613,42.2146756235893,47.4036711908956,23.7529274320467,44.1052727079879,78.2708702613226,131.451349406144,154.996326471312,158.481681015439,70.7686468390623,112.374620262341,92.8970570993779,21.7636447983192,36.7227611926186,26.1761871986899,11.1763982725893,12.294818729252,18.934903768215,25.1793635951155,27.574525291708,37.443537440983,5.47673941043627,10.9012578190223,12.0827400503959,13.8045228342741,19.3181261843,8.62515386189829,18.9594344845242,10.1550699881588,10.7550015725588,64.5721184450227,36.6762803121609,30.4246534443691,18.8154308599426,17.9856932952491,9.50747105259269,23.3802727127701,9.78224275722253,5.39939830368839,5.93319817540185,4.9733608046227,5.69240209984969,6.91592949578798,32.6622278771705,23.4910332697142,29.0248446664907,13.9968982357864,25.3998822094356,29.397791811589,26.5491954720515,14.7075005857603,12.1127469099328,18.1316020080967,21.6585211891303,19.6510568717989,26.348441357494,21.3574481928272,21.4970909231063,16.8828783009504,18.7941844765476,19.4454866412621,29.4709379254143,25.1639251864156,139.487648119725,57.5855288013706,10.1452571045587,37.858650587181,46.238050692127,20.5087212822371,17.5439632710871,16.5769948226014,15.4488862144927,39.8806954832655,69.6226492335688,43.8141072392822,44.6473640692077,17.9657068380045,7.64415719119937,0,78.1532658050483,79.554997759181,67.740275631981,13.7020655662872,11.1343289968284,12.9144660986398,59.5054670807846,37.1447883540812,36.4372485664572,40.8458355897607,19.4021366773913,22.4943198480119,14.3373081285937,7.66376591675532,27.4229271104461,39.147577687273,34.4512768798214,46.5480243009813,14.9113408974498,10.2473278954042,13.6140359428746,21.7138496927303,96.5709903517717,152.975196403319,126.434875937699,16.6267609739353,16.4700217014706,28.5235379296202,15.9918374576894,17.6443665557928,19.5320761885986,19.7934340942664,31.570202793598,30.3553008288627,19.7123751578266,7.78634866779954,45.2819141510209,47.3598335132954,35.8323638312645,25.6198190320716,18.5059277691612,22.6761284904184,24.8309570083281,9.8307280880826,42.2513266148371,31.391609307858,24.6331573829528,37.2632745126877,28.0827721717854,24.3776516565517,28.1921526878883,48.5643611037123,140.442637462647,120.953516343916,91.7848103047764,45.7747957303459,45.4980556363327,41.4142741360334,29.5930919481513,32.0725697748268,30.0820870130388,21.6256568617879,28.4369805483596,25.2213139513086,28.3042941851186,19.5359282254123,13.2952847655203,13.8889988054066,15.5880581856646,12.6154033634749,21.6598647021051,33.8556174727846,3.63460661282178,44.692145766139,47.7765681198924,45.518387684646,41.7530574683582,32.0676804151115,32.4671944013511,26.6315876557583,27.0481565080372,26.3518327558417,26.6415321328286,26.0632978373908,23.2007263671753,17.9763881730844,24.8558757355898,15.5330193138406,53.486348068769,52.7828128256947,31.5581659884625,33.6024690944769,32.5840178441611,27.9140563163468,16.4414996523069,11.0707610984702,14.9148791449306,16.4118228015995,13.6368208460088,95.769090681038,96.9035845908091,108.158676057115,68.566721029314,62.9472386953808,56.2723132436938,45.7436858546789,43.7765112292596,84.5649152619291,21.5652309791032,32.3762624471598,31.2037673114561,21.9743623813987,48.2579042373944,21.2275149399882,5.91210208533135,70.3013137668498,46.4450182859774,43.4547419584482,32.3872542638133,18.2581820611579,13.3304438896168,14.0496226457615,11.6650006638581,16.6098517236581,10.3645599627367,14.0922450655535,11.569893785015,10.9933284521949,12.0633027151418,21.2123216689297,34.9152633843516,31.4567890787395,21.6743296483519,23.4423373184406,122.623339141753,17.9254358315105,40.7005603046971,51.1474755028596,21.9731865687455,31.7828501276894,28.0726329343817,24.6276581786284,21.0501564870945,29.5178416490425,21.3455400091123,11.2462460747632,18.4522110770749,19.0530195923963,31.9258440333009,12.2077890999676,13.2745138339963,61.4235009472103,73.1623007854698,102.223953227697,57.8791710046315,52.8788454463555,28.4271122485043,40.7157777014806,59.1785648118637,51.8300283014738,43.2216295157495,36.0974401368654,7.14923172082955,36.012218806262,21.2148241403717,30.2215219394545,18.4433842987965,19.6205699362278,19.5813334516524,17.3545020995322,49.0463869853155,10.8034356140548,18.9654422327267,21.2703266294509,17.2766936564619,36.4290066566061,45.0033736891824,40.7069431367752,27.9821603164657,19.284231409093,39.471173464304,43.5476291402399,69.2627532362722,76.2892250868999,67.9370311773495,59.7111032069024,63.9118896776896,66.8967942107085,46.1587912506775,17.184071124272,48.0830710243326,36.5975040828328,44.6062057594039,37.8449815786188,30.1340337969725,34.5252726745141,20.7460173870593,26.175594198403,17.7572513409756,11.1841076355647,16.9107881605257,54.4240227600083,66.6797716542103,38.8902376688095,58.3802402119345,27.5398484549968,28.7525234682097,45.0507171560067,53.4782656571125,26.5742532908607,17.2818003754719,18.0126338758062,74.4001540114903,53.9232525115343,78.7320187245438,40.1019798295158,35.7626438606277,48.6791570555874,45.045305788246,47.0503656758368,38.7130577807399,38.5156027222731,24.2670123041984,28.3824932838972,15.7783817945118,16.5513180039104,111.214962640406,99.2235254100801,116.344039140306,8.88672132548076,21.5834846768859,21.9781949120718,34.9420457898877,7.52358156053045,20.8958181768315,20.2543104063158,24.0616115644547,16.6697586873377,19.182310553578,21.9064230243013,18.2256075062588,15.7612421128477,15.406841905463,12.9440077937955,62.272408550506,22.7444177838588,50.1956800917154,37.4384344285173,42.7610851761084,37.3202322153529,26.8918540639954,25.342312040384,21.1806678330598,22.9954462705056,20.7853025909997,23.7669190146456,30.5271314351817,26.6344634004256,29.7515729190077,24.7672719467198,22.9450965370814,29.9009291718743,23.4888963457885,26.2014077839227,24.0008476669791,23.9592338315106,27.6585980338892,24.4181979942312,27.6681578421072,24.1997778570195,29.8172595782619,33.6729230640439,34.358440803003,21.3234063229941,27.5233242048084,29.1573267831668,21.2800142448238,29.7478735077055,29.7076180910958,19.2354145012218,20.5859815431959,21.0573632967332,19.7026982030909,21.6179590737125,24.3461227401443
|short_description=p1@Rps3a
}}
}}

Revision as of 13:03, 18 April 2012

Short description:p1@Rps3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rps3a_5end
Coexpression cluster:NA
Association with transcript: 31bp_to_NM_016959, uc008prc.2_5end
EntrezGene:Rps3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rps3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G735.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I523.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I836.68
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E743.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6121.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F197.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A188.94
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A389.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A578.35
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A230.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.62
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A632.68
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H248.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I954.85
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D239.46
GP2+ M cell, pool1.CNhs13228.11845-124H936.75
GP2+ M cell, pool2.CNhs13231.11846-124I142.21
GP2+ M cell, pool3.CNhs13240.11847-124I247.40
Ileum epithelium, pool1.CNhs13199.10252-104B923.75
Ileum epithelium, pool2.CNhs13232.10253-104C144.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C878.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3131.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6155.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9158.48
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F570.77
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6112.37
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F792.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H136.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B337.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.96
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C164.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E136.68
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.42
Mouse Granule cells, donor1.CNhs12131.11713-123C318.82
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.38
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F426.35
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.16
Mouse Schwann, donor1.CNhs12507.11728-123D9139.49
Mouse Schwann, donor2.CNhs12573.11746-123F957.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C446.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C820.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F417.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I739.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E369.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I843.81
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G644.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G178.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G279.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G367.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.70
accessory axillary lymph node, adult.CNhs10475.1063-29H911.13
adrenal gland, adult.CNhs10508.49-24D712.91
adrenal gland, embryo E14.CNhs11038.406-44C559.51
adrenal gland, embryo E16.CNhs11004.1254-43D637.14
adrenal gland, embryo E17.CNhs11043.1263-45I136.44
adrenal gland, embryo E18.CNhs11026.1262-18F540.85
adrenal gland, neonate N00.CNhs11191.1311-23C119.40
adrenal gland, neonate N25.CNhs11223.1377-27I322.49
amnion, adult pregnant day17.5.CNhs10488.583-22A814.34
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G227.42
bone (os femoris), neonate N02.CNhs11227.1985-43F539.15
bone (os femoris), neonate N16.CNhs11225.1525-43A634.45
bone (os femoris), neonate N20.CNhs11195.1350-25C346.55
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H721.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C796.57
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1152.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4126.43
corpora quadrigemina, adult.CNhs10501.16-22A416.63
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F128.52
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B219.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.36
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C645.28
eyeball, embryo E14.CNhs10521.399-16E247.36
eyeball, embryo E15.CNhs10593.426-16C935.83
eyeball, embryo E17.CNhs11023.1261-18D425.62
eyeball, neonate N00.CNhs11207.633-15C618.51
eyeball, neonate N01.CNhs11140.1532-43E722.68
eyeball, neonate N02.CNhs11205.1551-44G824.83
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E242.25
forelimb, embryo E12.CNhs10600.359-14H231.39
forelimb, embryo E13.CNhs10589.384-1E224.63
forelimb, embryo E14.CNhs10577.413-26A837.26
forelimb, embryo E15.CNhs11007.437-20E728.08
forelimb, embryo E17.CNhs10598.1517-43C424.38
forelimb, embryo E18.CNhs11008.1520-43B528.19
gonad, embryo E13.CNhs11044.1564-45I648.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8140.44
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2120.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D591.78
heart, embryo E11.CNhs10586.331-24E945.77
heart, embryo E12.CNhs11015.353-12F545.50
heart, embryo E13.CNhs11013.376-3I941.41
heart, embryo E14.CNhs10597.403-26D429.59
heart, embryo E15.CNhs11017.431-16C832.07
heart, embryo E16.CNhs11021.457-17C630.08
heart, embryo E17.CNhs11025.479-18E521.63
heart, embryo E18.CNhs11030.1283-20G328.44
heart, neonate N00.CNhs11213.639-21E325.22
heart, neonate N03.CNhs11221.1349-25I228.30
heart, neonate N10.CNhs11118.749-24G119.54
heart, neonate N16.CNhs11209.782-15G113.30
heart, neonate N20.CNhs11127.821-26I613.89
heart, neonate N25.CNhs11196.1351-25D315.59
heart, neonate N30.CNhs11202.1390-42D212.62
hippocampus, adult.CNhs10478.13-16E821.66
hippocampus, neonate N00.CNhs11228.627-43G133.86
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A344.69
intestine, embryo E12.CNhs11019.1251-16I547.78
intestine, embryo E13.CNhs11010.381-16D545.52
intestine, embryo E15.CNhs10602.976-16D841.75
intestine, embryo E16.CNhs10585.463-22H432.07
intestine, embryo E17.CNhs10582.482-18D332.47
intestine, embryo E18.CNhs10526.1289-20F726.63
intestine, neonate N00.CNhs11126.644-26D127.05
intestine, neonate N01.CNhs11192.1322-23E926.35
intestine, neonate N06.CNhs11102.688-20B826.64
intestine, neonate N07.CNhs11095.720-20F226.06
intestine, neonate N10.CNhs11098.755-23A523.20
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E324.86
intestine, neonate N30.CNhs11131.1384-42G115.53
kidney, embryo E14.CNhs10606.411-4I953.49
kidney, embryo E15.CNhs10997.434-16F852.78
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I233.60
kidney, embryo E18.CNhs11001.1288-20C732.58
kidney, neonate N00.CNhs11214.646-21G727.91
kidney, neonate N10.CNhs11206.758-6D516.44
kidney, neonate N20.CNhs11113.832-19I111.07
kidney, neonate N25.CNhs11122.1353-25F314.91
kidney, neonate N30.CNhs11203.1385-42H116.41
liver, adult pregnant day01.CNhs10466.508-5B213.64
liver, embryo E12.CNhs10601.355-15F895.77
liver, embryo E13.CNhs10524.378-3H696.90
liver, embryo E14.CNhs10594.409-16E1108.16
liver, embryo E15.CNhs10520.433-16D768.57
liver, embryo E16.CNhs10523.462-17F562.95
liver, embryo E17.CNhs10510.481-18A356.27
liver, embryo E18.CNhs10579.499-43G445.74
liver, neonate N00.CNhs11117.641-24F443.78
liver, neonate N03.CNhs11123.1345-25G284.56
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H232.38
liver, neonate N10.CNhs11115.751-24B931.20
liver, neonate N20.CNhs11220.823-25A321.97
liver, neonate N25.CNhs11198.1368-26H148.26
liver, neonate N30.CNhs11106.1382-42D121.23
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G270.30
lung, embryo E14.CNhs10604.404-26F846.45
lung, embryo E15.CNhs11020.432-17C543.45
lung, embryo E16.CNhs10998.458-17B632.39
lung, embryo E17.CNhs10605.480-44A618.26
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C614.05
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E610.36
lung, neonate N20.CNhs11109.822-18A414.09
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H210.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B634.92
mammary gland, adult pregnant day19.CNhs10476.588-5H231.46
medulla oblongata, adult.CNhs10477.17-12C221.67
medulla oblongata, neonate N30.CNhs11200.1396-42A323.44
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7122.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C217.93
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E140.70
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E251.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.07
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D529.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.35
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I718.45
ovary, embryo E18.CNhs11040.505-44H719.05
ovary, neonate N00.CNhs11217.1299-22I431.93
oviduct, adult pregnant day01.CNhs10500.988-6G612.21
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F461.42
pancreas, embryo E15.CNhs11042.1556-45F273.16
pancreas, embryo E16.CNhs11003.460-26E5102.22
pancreas, embryo E17.CNhs10599.1558-45G357.88
pancreas, embryo E18.CNhs10580.1535-43I752.88
pancreas, neonate N00.CNhs11105.645-26G928.43
pancreas, neonate N01.CNhs11138.1531-43D740.72
pancreas, neonate N02.CNhs11139.1539-43D859.18
pancreas, neonate N16.CNhs11136.787-43B651.83
pancreas, neonate N25.CNhs11094.1555-45E243.22
pancreas, neonate N30.CNhs11182.1548-44H536.10
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E636.01
pituitary gland, embryo E13.CNhs11009.370-44C721.21
pituitary gland, embryo E14.CNhs11037.398-44A530.22
pituitary gland, embryo E15.CNhs10592.427-16B918.44
pituitary gland, embryo E16.CNhs11036.449-43F619.62
pituitary gland, embryo E17.CNhs11039.1265-44F519.58
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I749.05
placenta, adult pregnant day17.CNhs10464.577-18G310.80
prostate, adult.CNhs10470.859-1F818.97
skin, adult.CNhs10492.30-1C321.27
skin, neonate N00.CNhs11124.650-25G417.28
skin, neonate N03.CNhs11215.662-22H336.43
skin, neonate N06.CNhs11097.693-20I545.00
skin, neonate N10.CNhs11108.762-6C440.71
small intestine, neonate N16.CNhs11114.790-21I127.98
spinal cord, adult.CNhs10505.24-13C919.28
spleen, adult.CNhs10465.25-2G239.47
spleen, embryo E16.CNhs11035.461-43C143.55
spleen, embryo E18.CNhs11011.1271-21F269.26
spleen, neonate N10.CNhs11116.752-24D176.29
spleen, neonate N20.CNhs11112.824-19H167.94
spleen, neonate N25.CNhs11099.1354-25G359.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C663.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C966.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D346.16
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E348.08
stomach, embryo E15.CNhs10603.1252-16G836.60
stomach, embryo E16.CNhs11022.459-17D444.61
stomach, embryo E17.CNhs11006.1035-18D537.84
stomach, embryo E18.CNhs10999.1286-20C630.13
stomach, neonate N03.CNhs11193.1340-24B834.53
stomach, neonate N07.CNhs11210.718-18A920.75
stomach, neonate N25.CNhs11104.1355-25E426.18
stomach, neonate N30.CNhs11134.1386-42I117.76
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G516.91
testis, embryo E13.CNhs11031.389-23F554.42
testis, embryo E15.CNhs11034.443-27C566.68
testis, embryo E16.CNhs11033.470-26G538.89
testis, embryo E17.CNhs11029.486-18I558.38
testis, embryo E18.CNhs11027.503-18G527.54
testis, neonate N00.CNhs11189.1300-22B728.75
testis, neonate N07.CNhs11222.726-26I445.05
testis, neonate N10.CNhs11204.763-44D953.48
testis, neonate N20.CNhs11110.839-18H326.57
testis, neonate N30.CNhs11130.1391-42E217.28
thymus, adult.CNhs10471.38-12B518.01
thymus, embryo E14.CNhs11041.402-44I474.40
thymus, embryo E15.CNhs11005.430-45I253.92
thymus, embryo E16.CNhs11002.456-26C578.73
thymus, embryo E17.CNhs10581.478-18C140.10
thymus, embryo E18.CNhs10595.1273-19G435.76
thymus, neonate N02.CNhs11181.1541-43F848.68
thymus, neonate N03.CNhs11137.2104-43C745.05
thymus, neonate N06.CNhs11197.681-26C447.05
thymus, neonate N07.CNhs11211.713-19D338.71
thymus, neonate N10.CNhs11194.748-24E438.52
thymus, neonate N20.CNhs11186.820-7A224.27
thymus, neonate N25.CNhs11125.1362-25G728.38
thymus, neonate N30.CNhs11132.1393-42G215.78
tongue, adult.CNhs10499.32-1B416.55
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3111.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F799.22
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5116.34
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F521.58
uterus, adult.CNhs10509.92-27E521.98
vagina, adult.CNhs10502.89-27D534.94
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.25
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I862.27
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H250.20
whole body, embryo E14.5.CNhs10578.420-27D237.44
whole body, embryo E14.CNhs10519.395-14B142.76
whole body, embryo E16.CNhs10514.453-14F237.32
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G530.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.90
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.66
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G524.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G524.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G533.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.75
whole body, embryo E17.5.CNhs10513.490-9F929.71
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B320.59
whole body, neonate N00.CNhs10525.657-19C221.06
whole body, neonate N01.CNhs10576.659-23C619.70
whole body, neonate N06.CNhs10515.692-21D121.62
whole body, neonate N10.CNhs10518.761-6B424.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:85946515..85946558,-&oldid=889864"