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FFCP PHASE1:Mm9::chr19:8831629..8831645,+: Difference between revisions

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|description=CAGE_peak_1_at_Nxf1_5end
|description=CAGE_peak_1_at_Nxf1_5end
|id=chr19:8831629..8831645,+
|id=chr19:8831629..8831645,+
|ontology_enrichment_celltype=CL:0000542!1.32e-08!13;CL:0000051!1.32e-08!13;CL:0000838!1.94e-08!12;CL:0000988!2.72e-08!32;CL:0002032!2.72e-08!32;CL:0000037!2.72e-08!32;CL:0000566!2.72e-08!32;CL:0000837!2.72e-08!32;CL:0000084!8.61e-08!11;CL:0000827!8.61e-08!11
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=43.7206352596087,66.3053274514786,49.1399178540699,99.8131897312539,80.1433167914156,51.5389364769502,57.9359348676904,91.8066829669607,314.662794008975,367.48130632553,53.7624420228086,44.5926368783931,149.287036500011,156.9196223421,41.9718299887735,53.2509953235242,27.2829132469977,53.9440302762586,66.5005002987833,55.595044385542,29.7651515528744,62.9504630613613,69.7403437000957,57.1172949372462,48.4053583051729,39.0477735598214,43.5069616120666,51.7130958446134,31.9239344686708,19.4063199915147,27.4945833212578,59.6928833052053,52.2805069446885,31.6963362030877,35.2398976096555,37.9014991417363,39.2005164023749,45.201416119586,31.253413780952,59.1581830690392,64.7054636834116,51.9114568568419,47.5800145970531,30.2152363141385,28.8924253975616,20.0065959856233,21.1245662973971,6.97680500417429,10.3252505885202,11.2769341463084,12.1788186814065,4.31257693094915,95.6360854529097,155.952860532439,147.209084024399,17.2363822144084,13.1805382371828,20.1112115988203,19.4223802425214,24.8625760257855,16.4796164911607,9.4876468979357,8.00365316500025,10.3488467487361,7.9109309005358,12.7886420690298,8.38880309451533,8.06858441175265,18.664130215526,21.3309382564071,19.9808713283813,11.7116903605559,15.0190607847097,20.8234358665422,21.9486128631761,15.6267193723704,15.4162233399144,12.1302971180928,11.8277030607307,15.9582408153535,19.6698433745181,16.1483144872596,13.4007839520663,15.757353080887,18.3357897332172,17.6777151284201,16.7998583342941,20.6903384866084,18.7043697532965,18.9684615868032,53.045201432407,35.2773789562368,32.638624017972,36.1601138397337,35.7377029596218,32.7059627581055,24.7182179431883,30.8478883866285,18.1850203222008,22.6137327686618,36.3376023023836,25.6652954828636,20.3844191765317,7.11066703153331,30.30874574157,25.8427062784601,28.3093689208279,30.6012797647081,107.200283829929,28.3524485613815,28.7985642431786,28.010824004717,23.522780720118,22.9098413639986,27.3981687626192,21.9916534826932,43.2591193535154,19.5209131841881,42.461306493594,21.353224193058,32.6845447321382,42.6690222758995,37.2783522436244,14.3462590535658,15.0801628905688,28.6111901833622,54.8753270237115,43.7928993625188,55.021408322637,17.2259235315546,22.8750301409313,23.2460551408799,15.9918374576894,12.0186264945255,16.2074674756457,18.4955039897244,20.1641940423626,38.6905678597389,64.6970261590207,35.3542317889276,46.8433594665733,30.3470777852184,30.2504378072987,28.6339153887859,22.9283002139975,32.2846575117821,17.8033276663485,30.0095910057258,55.4009741837405,60.70305173387,53.4891417458404,38.5784489072532,59.2240640850523,35.8699731517832,39.3043880539172,45.7778813682534,61.7947604835647,53.7857125869755,49.1602853954375,37.0755132838548,45.0290035163705,29.7102401410675,31.0135603616625,27.3502282128891,27.1510118681786,26.7414036462969,21.1935987105699,17.7483320398098,20.0763016894446,31.3559856391072,26.0230878642197,24.7077978748812,17.124908992702,24.1571553768669,15.7717461423095,19.4489717396848,55.1799367582943,34.1141230995972,45.2171091134696,42.7315476223207,37.5004312447292,37.3114520553184,32.6895724451959,32.3383564391351,33.2170343081158,26.0224348463937,26.138861715228,31.0372096384195,33.9237511587269,35.9527763461689,40.4178153265678,38.4342657380929,51.9690048611444,47.5273812456472,63.116331976925,43.9886868145879,35.8812101260108,26.1606608190888,35.0330415668385,36.3120964029821,29.9867570177026,31.2194824722155,43.5785361818109,47.7177002348029,43.6360969151311,51.4934237361315,41.7891850060316,47.9942547907309,45.0687757653113,37.6881940060562,39.2367248795586,49.4210543738547,27.3159592401974,42.4240680342094,57.1028941799646,45.211619152533,33.1885215015538,46.3145780508832,32.8860678496556,40.1721792953428,56.2229168724989,48.3773494459286,52.805305864913,43.5516269348721,29.7554551107517,24.1965723343671,40.3545968911849,32.7767740680187,29.8180417389501,36.869245811041,25.5573773161525,29.6530570092099,27.142431109069,13.053736411649,52.1270129400178,56.0151594998607,19.5871719785106,20.74646852682,14.5902101385241,24.4896799388242,33.128363038707,38.2629969410706,43.946373137491,33.4556317133573,39.8809626607485,27.7415000173056,35.2185310457158,37.9932615284705,37.1570511269732,19.2792789853084,37.8980027506077,37.5718423737909,19.3835481630756,52.9554094741839,35.84118735179,42.4866113271218,40.8136801902414,43.0019581843448,44.5905858249967,38.121958345047,27.1349707826632,35.6263054887955,34.580245703318,45.1932563848217,25.3004660579997,37.1287955693473,34.7248397868864,43.3947236615458,49.8030932563605,32.1505552547388,41.8522951395766,28.1822731811271,26.3278432963394,21.0080814889074,33.0887108369832,40.2480934641258,38.5924696596183,32.647478082413,41.3348932341518,37.3940134554566,39.8703628970476,43.8256202319314,36.7265854153612,18.7279555030615,43.9138163650481,35.0857675537478,42.0391577129245,53.1199048753229,55.3611622270152,44.3829656020654,57.9626446279047,65.9171340444429,54.7271896265518,60.1442489349522,43.0216951270344,39.4439766226086,36.2897945161252,39.0995113547056,45.6377758229511,33.7160865962052,31.490966631353,38.4781234716524,28.5152941241944,37.2803587852155,31.0031116276305,54.1249896679203,38.5518282765037,34.6123115252405,24.6695262842466,38.0151282354251,28.9872379455012,30.5980304383283,40.0562695706215,35.7544498822489,29.0910306320444,76.4746911920191,34.4632865993279,54.9503620831826,57.9446870480966,67.1350108753055,62.5846267560984,69.593165272062,73.9924531144632,74.7151729616292,58.6792411243499,77.736988740504,83.7163195554473,69.8497970308792,65.6848190260418,27.6611068010558,22.8645531975287,30.9512805302691,31.3944232600827,39.7970563706312,32.6567507285057,44.3226930726781,50.5909374626595,28.0880378259804,14.1187960654267,18.4130094602871,16.6139698897425,12.7171354934329,6.16574267793578,13.5970901530146,10.8003600037089,9.45674526770863,13.5942722695261,8.80192529978094,40.5808529054131,47.0849350613217,36.878458842893,41.5712486186783,29.1362296052895,17.8328203196514,28.4475811586067,31.111293643073,29.8454864920388,24.5116295410884,32.4453503859507,37.3480155944431,27.7178862110852,28.6832682773814,27.2818477539163,30.9590899333998,25.2627830559785,27.7789277467735,30.0822707586414,28.8509883463419,32.9154482289999,29.1060322101313,34.8116837323089,31.8308652424799,28.5151422658452,29.2766543305201,24.8782043106971,32.3575745068547,25.8027816307137,20.7622640513363,24.2015436973315,24.3306071467642,23.735400503842,26.0293893192423,26.0423924824541,21.4837097026634,34.6218780499204,26.2142685938924,21.4242931917105,21.6179590737125,24.1142549045238
|phase1_expression=43.7206352596087,66.3053274514786,49.1399178540699,99.8131897312539,80.1433167914156,51.5389364769502,57.9359348676904,91.8066829669607,314.662794008975,367.48130632553,53.7624420228086,44.5926368783931,149.287036500011,156.9196223421,41.9718299887735,53.2509953235242,27.2829132469977,53.9440302762586,66.5005002987833,55.595044385542,29.7651515528744,62.9504630613613,69.7403437000957,57.1172949372462,48.4053583051729,39.0477735598214,43.5069616120666,51.7130958446134,31.9239344686708,19.4063199915147,27.4945833212578,59.6928833052053,52.2805069446885,31.6963362030877,35.2398976096555,37.9014991417363,39.2005164023749,45.201416119586,31.253413780952,59.1581830690392,64.7054636834116,51.9114568568419,47.5800145970531,30.2152363141385,28.8924253975616,20.0065959856233,21.1245662973971,6.97680500417429,10.3252505885202,11.2769341463084,12.1788186814065,4.31257693094915,95.6360854529097,155.952860532439,147.209084024399,17.2363822144084,13.1805382371828,20.1112115988203,19.4223802425214,24.8625760257855,16.4796164911607,9.4876468979357,8.00365316500025,10.3488467487361,7.9109309005358,12.7886420690298,8.38880309451533,8.06858441175265,18.664130215526,21.3309382564071,19.9808713283813,11.7116903605559,15.0190607847097,20.8234358665422,21.9486128631761,15.6267193723704,15.4162233399144,12.1302971180928,11.8277030607307,15.9582408153535,19.6698433745181,16.1483144872596,13.4007839520663,15.757353080887,18.3357897332172,17.6777151284201,16.7998583342941,20.6903384866084,18.7043697532965,18.9684615868032,53.045201432407,35.2773789562368,32.638624017972,36.1601138397337,35.7377029596218,32.7059627581055,24.7182179431883,30.8478883866285,18.1850203222008,22.6137327686618,36.3376023023836,25.6652954828636,20.3844191765317,7.11066703153331,30.30874574157,25.8427062784601,28.3093689208279,30.6012797647081,107.200283829929,28.3524485613815,28.7985642431786,28.010824004717,23.522780720118,22.9098413639986,27.3981687626192,21.9916534826932,43.2591193535154,19.5209131841881,42.461306493594,21.353224193058,32.6845447321382,42.6690222758995,37.2783522436244,14.3462590535658,15.0801628905688,28.6111901833622,54.8753270237115,43.7928993625188,55.021408322637,17.2259235315546,22.8750301409313,23.2460551408799,15.9918374576894,12.0186264945255,16.2074674756457,18.4955039897244,20.1641940423626,38.6905678597389,64.6970261590207,35.3542317889276,46.8433594665733,30.3470777852184,30.2504378072987,28.6339153887859,22.9283002139975,32.2846575117821,17.8033276663485,30.0095910057258,55.4009741837405,60.70305173387,53.4891417458404,38.5784489072532,59.2240640850523,35.8699731517832,39.3043880539172,45.7778813682534,61.7947604835647,53.7857125869755,49.1602853954375,37.0755132838548,45.0290035163705,29.7102401410675,31.0135603616625,27.3502282128891,27.1510118681786,26.7414036462969,21.1935987105699,17.7483320398098,20.0763016894446,31.3559856391072,26.0230878642197,24.7077978748812,17.124908992702,24.1571553768669,15.7717461423095,19.4489717396848,55.1799367582943,34.1141230995972,45.2171091134696,42.7315476223207,37.5004312447292,37.3114520553184,32.6895724451959,32.3383564391351,33.2170343081158,26.0224348463937,26.138861715228,31.0372096384195,33.9237511587269,35.9527763461689,40.4178153265678,38.4342657380929,51.9690048611444,47.5273812456472,63.116331976925,43.9886868145879,35.8812101260108,26.1606608190888,35.0330415668385,36.3120964029821,29.9867570177026,31.2194824722155,43.5785361818109,47.7177002348029,43.6360969151311,51.4934237361315,41.7891850060316,47.9942547907309,45.0687757653113,37.6881940060562,39.2367248795586,49.4210543738547,27.3159592401974,42.4240680342094,57.1028941799646,45.211619152533,33.1885215015538,46.3145780508832,32.8860678496556,40.1721792953428,56.2229168724989,48.3773494459286,52.805305864913,43.5516269348721,29.7554551107517,24.1965723343671,40.3545968911849,32.7767740680187,29.8180417389501,36.869245811041,25.5573773161525,29.6530570092099,27.142431109069,13.053736411649,52.1270129400178,56.0151594998607,19.5871719785106,20.74646852682,14.5902101385241,24.4896799388242,33.128363038707,38.2629969410706,43.946373137491,33.4556317133573,39.8809626607485,27.7415000173056,35.2185310457158,37.9932615284705,37.1570511269732,19.2792789853084,37.8980027506077,37.5718423737909,19.3835481630756,52.9554094741839,35.84118735179,42.4866113271218,40.8136801902414,43.0019581843448,44.5905858249967,38.121958345047,27.1349707826632,35.6263054887955,34.580245703318,45.1932563848217,25.3004660579997,37.1287955693473,34.7248397868864,43.3947236615458,49.8030932563605,32.1505552547388,41.8522951395766,28.1822731811271,26.3278432963394,21.0080814889074,33.0887108369832,40.2480934641258,38.5924696596183,32.647478082413,41.3348932341518,37.3940134554566,39.8703628970476,43.8256202319314,36.7265854153612,18.7279555030615,43.9138163650481,35.0857675537478,42.0391577129245,53.1199048753229,55.3611622270152,44.3829656020654,57.9626446279047,65.9171340444429,54.7271896265518,60.1442489349522,43.0216951270344,39.4439766226086,36.2897945161252,39.0995113547056,45.6377758229511,33.7160865962052,31.490966631353,38.4781234716524,28.5152941241944,37.2803587852155,31.0031116276305,54.1249896679203,38.5518282765037,34.6123115252405,24.6695262842466,38.0151282354251,28.9872379455012,30.5980304383283,40.0562695706215,35.7544498822489,29.0910306320444,76.4746911920191,34.4632865993279,54.9503620831826,57.9446870480966,67.1350108753055,62.5846267560984,69.593165272062,73.9924531144632,74.7151729616292,58.6792411243499,77.736988740504,83.7163195554473,69.8497970308792,65.6848190260418,27.6611068010558,22.8645531975287,30.9512805302691,31.3944232600827,39.7970563706312,32.6567507285057,44.3226930726781,50.5909374626595,28.0880378259804,14.1187960654267,18.4130094602871,16.6139698897425,12.7171354934329,6.16574267793578,13.5970901530146,10.8003600037089,9.45674526770863,13.5942722695261,8.80192529978094,40.5808529054131,47.0849350613217,36.878458842893,41.5712486186783,29.1362296052895,17.8328203196514,28.4475811586067,31.111293643073,29.8454864920388,24.5116295410884,32.4453503859507,37.3480155944431,27.7178862110852,28.6832682773814,27.2818477539163,30.9590899333998,25.2627830559785,27.7789277467735,30.0822707586414,28.8509883463419,32.9154482289999,29.1060322101313,34.8116837323089,31.8308652424799,28.5151422658452,29.2766543305201,24.8782043106971,32.3575745068547,25.8027816307137,20.7622640513363,24.2015436973315,24.3306071467642,23.735400503842,26.0293893192423,26.0423924824541,21.4837097026634,34.6218780499204,26.2142685938924,21.4242931917105,21.6179590737125,24.1142549045238
|short_description=p1@Nxf1
|short_description=p1@Nxf1
}}
}}

Revision as of 11:38, 18 April 2012

Short description:p1@Nxf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nxf1_5end
Coexpression cluster:NA
Association with transcript: 36bp_to_ENSMUST00000010241, NM_016813, uc008gmr.1_5end
EntrezGene:Nxf1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Nxf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G743.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I566.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I649.14
CD326+ enterocyte, pool1.CNhs13542.11848-124I399.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I480.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I751.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I857.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E991.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7314.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2367.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E653.76
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F144.59
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4149.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8156.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A141.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A353.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.28
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A253.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A466.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A655.60
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H262.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I969.74
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D157.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D248.41
GP2+ M cell, pool1.CNhs13228.11845-124H939.05
GP2+ M cell, pool2.CNhs13231.11846-124I143.51
GP2+ M cell, pool3.CNhs13240.11847-124I251.71
Ileum epithelium, pool1.CNhs13199.10252-104B931.92
Ileum epithelium, pool2.CNhs13232.10253-104C119.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I359.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G652.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F535.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F739.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G845.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H131.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H359.16
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G964.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H251.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H447.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D830.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A295.64
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9155.95
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1147.21
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.11
Mouse Granule cells, donor1.CNhs12131.11713-123C319.42
Mouse Granule cells, donor2.CNhs12357.11731-123E324.86
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.02
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.95
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.69
Mouse Schwann, donor1.CNhs12507.11728-123D918.70
Mouse Schwann, donor2.CNhs12573.11746-123F918.97
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G353.05
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C836.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F632.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E318.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G636.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G328.31
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.60
accessory axillary lymph node, adult.CNhs10475.1063-29H9107.20
adrenal gland, adult.CNhs10508.49-24D728.35
adrenal gland, embryo E14.CNhs11038.406-44C528.80
adrenal gland, embryo E16.CNhs11004.1254-43D628.01
adrenal gland, embryo E17.CNhs11043.1263-45I123.52
adrenal gland, embryo E18.CNhs11026.1262-18F522.91
adrenal gland, neonate N00.CNhs11191.1311-23C127.40
adrenal gland, neonate N25.CNhs11223.1377-27I321.99
amnion, adult pregnant day17.5.CNhs10488.583-22A843.26
aorta, adult.CNhs10498.46-23H119.52
bone (os femoris), adult.CNhs10483.56-12G242.46
bone (os femoris), neonate N02.CNhs11227.1985-43F521.35
bone (os femoris), neonate N16.CNhs11225.1525-43A632.68
bone (os femoris), neonate N20.CNhs11195.1350-25C342.67
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H728.61
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C754.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D143.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D455.02
corpora quadrigemina, adult.CNhs10501.16-22A417.23
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F123.25
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B218.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A238.69
epididymis, adult.CNhs10490.58-23B264.70
eyeball, adult.CNhs10484.31-12G435.35
eyeball, embryo E12.CNhs11016.345-16C646.84
eyeball, embryo E14.CNhs10521.399-16E230.35
eyeball, embryo E15.CNhs10593.426-16C930.25
eyeball, embryo E17.CNhs11023.1261-18D428.63
eyeball, neonate N00.CNhs11207.633-15C622.93
eyeball, neonate N01.CNhs11140.1532-43E732.28
eyeball, neonate N02.CNhs11205.1551-44G817.80
eyeball, neonate N16.CNhs11188.777-19A230.01
forelimb, embryo E11.CNhs10596.335-25E255.40
forelimb, embryo E12.CNhs10600.359-14H260.70
forelimb, embryo E13.CNhs10589.384-1E253.49
forelimb, embryo E14.CNhs10577.413-26A838.58
forelimb, embryo E15.CNhs11007.437-20E759.22
forelimb, embryo E17.CNhs10598.1517-43C435.87
forelimb, embryo E18.CNhs11008.1520-43B539.30
gonad, embryo E13.CNhs11044.1564-45I645.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C861.79
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D253.79
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D549.16
heart, embryo E11.CNhs10586.331-24E937.08
heart, embryo E12.CNhs11015.353-12F545.03
heart, embryo E13.CNhs11013.376-3I929.71
heart, embryo E14.CNhs10597.403-26D431.01
heart, embryo E15.CNhs11017.431-16C827.35
heart, embryo E16.CNhs11021.457-17C627.15
heart, embryo E17.CNhs11025.479-18E526.74
heart, embryo E18.CNhs11030.1283-20G321.19
heart, neonate N00.CNhs11213.639-21E317.75
heart, neonate N03.CNhs11221.1349-25I220.08
heart, neonate N10.CNhs11118.749-24G131.36
heart, neonate N16.CNhs11209.782-15G126.02
heart, neonate N20.CNhs11127.821-26I624.71
heart, neonate N25.CNhs11196.1351-25D317.12
heart, neonate N30.CNhs11202.1390-42D224.16
hippocampus, adult.CNhs10478.13-16E815.77
hippocampus, neonate N00.CNhs11228.627-43G119.45
intestinal mucosa, adult.CNhs10506.860-29I355.18
intestine, adult.CNhs10496.178-9A334.11
intestine, embryo E12.CNhs11019.1251-16I545.22
intestine, embryo E13.CNhs11010.381-16D542.73
intestine, embryo E15.CNhs10602.976-16D837.50
intestine, embryo E16.CNhs10585.463-22H437.31
intestine, embryo E17.CNhs10582.482-18D332.69
intestine, embryo E18.CNhs10526.1289-20F732.34
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E926.02
intestine, neonate N06.CNhs11102.688-20B826.14
intestine, neonate N07.CNhs11095.720-20F231.04
intestine, neonate N10.CNhs11098.755-23A533.92
intestine, neonate N20.CNhs11187.827-18D135.95
intestine, neonate N25.CNhs11121.1352-25E340.42
intestine, neonate N30.CNhs11131.1384-42G138.43
kidney, embryo E14.CNhs10606.411-4I951.97
kidney, embryo E15.CNhs10997.434-16F847.53
kidney, embryo E16.CNhs10584.464-22A563.12
kidney, embryo E17.CNhs11028.483-18I243.99
kidney, embryo E18.CNhs11001.1288-20C735.88
kidney, neonate N00.CNhs11214.646-21G726.16
kidney, neonate N10.CNhs11206.758-6D535.03
kidney, neonate N20.CNhs11113.832-19I136.31
kidney, neonate N25.CNhs11122.1353-25F329.99
kidney, neonate N30.CNhs11203.1385-42H131.22
liver, adult pregnant day01.CNhs10466.508-5B243.58
liver, embryo E12.CNhs10601.355-15F847.72
liver, embryo E13.CNhs10524.378-3H643.64
liver, embryo E14.CNhs10594.409-16E151.49
liver, embryo E15.CNhs10520.433-16D741.79
liver, embryo E16.CNhs10523.462-17F547.99
liver, embryo E17.CNhs10510.481-18A345.07
liver, embryo E18.CNhs10579.499-43G437.69
liver, neonate N00.CNhs11117.641-24F439.24
liver, neonate N03.CNhs11123.1345-25G249.42
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H242.42
liver, neonate N10.CNhs11115.751-24B957.10
liver, neonate N20.CNhs11220.823-25A345.21
liver, neonate N25.CNhs11198.1368-26H133.19
liver, neonate N30.CNhs11106.1382-42D146.31
lung, adult.CNhs10474.28-22B132.89
lung, embryo E12.CNhs10522.354-16G240.17
lung, embryo E14.CNhs10604.404-26F856.22
lung, embryo E15.CNhs11020.432-17C548.38
lung, embryo E16.CNhs10998.458-17B652.81
lung, embryo E17.CNhs10605.480-44A643.55
lung, embryo E18.CNhs10583.1287-20I629.76
lung, neonate N00.CNhs11224.640-42C624.20
lung, neonate N06.CNhs11212.683-20E540.35
lung, neonate N07.CNhs11111.715-19A332.78
lung, neonate N10.CNhs11219.750-23E629.82
lung, neonate N20.CNhs11109.822-18A436.87
lung, neonate N25.CNhs11119.1359-25C725.56
lung, neonate N30.CNhs11133.1394-42H229.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.05
mammary gland, adult lactating day02.CNhs10480.595-22B652.13
mammary gland, adult pregnant day19.CNhs10476.588-5H256.02
medulla oblongata, adult.CNhs10477.17-12C219.59
medulla oblongata, neonate N30.CNhs11200.1396-42A320.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.49
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E133.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E238.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E343.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D733.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D839.88
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D537.99
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D637.16
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I737.90
ovary, embryo E18.CNhs11040.505-44H737.57
ovary, neonate N00.CNhs11217.1299-22I419.38
oviduct, adult pregnant day01.CNhs10500.988-6G652.96
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F442.49
pancreas, embryo E15.CNhs11042.1556-45F240.81
pancreas, embryo E16.CNhs11003.460-26E543.00
pancreas, embryo E17.CNhs10599.1558-45G344.59
pancreas, embryo E18.CNhs10580.1535-43I738.12
pancreas, neonate N00.CNhs11105.645-26G927.13
pancreas, neonate N01.CNhs11138.1531-43D735.63
pancreas, neonate N02.CNhs11139.1539-43D834.58
pancreas, neonate N16.CNhs11136.787-43B645.19
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G834.72
pituitary gland, embryo E12.CNhs11018.346-16E643.39
pituitary gland, embryo E13.CNhs11009.370-44C749.80
pituitary gland, embryo E14.CNhs11037.398-44A532.15
pituitary gland, embryo E15.CNhs10592.427-16B941.85
pituitary gland, embryo E16.CNhs11036.449-43F628.18
pituitary gland, embryo E17.CNhs11039.1265-44F526.33
pituitary gland, neonate N00.CNhs11190.1308-22E921.01
placenta, adult pregnant day10.CNhs10472.539-13I733.09
placenta, adult pregnant day17.CNhs10464.577-18G340.25
prostate, adult.CNhs10470.859-1F838.59
skin, adult.CNhs10492.30-1C332.65
skin, neonate N00.CNhs11124.650-25G441.33
skin, neonate N03.CNhs11215.662-22H337.39
skin, neonate N06.CNhs11097.693-20I539.87
skin, neonate N10.CNhs11108.762-6C443.83
small intestine, neonate N16.CNhs11114.790-21I136.73
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G243.91
spleen, embryo E16.CNhs11035.461-43C135.09
spleen, embryo E18.CNhs11011.1271-21F242.04
spleen, neonate N10.CNhs11116.752-24D153.12
spleen, neonate N20.CNhs11112.824-19H155.36
spleen, neonate N25.CNhs11099.1354-25G344.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C657.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C965.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D354.73
stomach, adult.CNhs10503.33-1H660.14
stomach, embryo E12.CNhs10588.356-43E343.02
stomach, embryo E15.CNhs10603.1252-16G839.44
stomach, embryo E16.CNhs11022.459-17D436.29
stomach, embryo E17.CNhs11006.1035-18D539.10
stomach, embryo E18.CNhs10999.1286-20C645.64
stomach, neonate N03.CNhs11193.1340-24B833.72
stomach, neonate N07.CNhs11210.718-18A931.49
stomach, neonate N25.CNhs11104.1355-25E438.48
stomach, neonate N30.CNhs11134.1386-42I128.52
submandibular gland, adult.CNhs10469.59-29C137.28
testis, adult.CNhs10504.57-7G531.00
testis, embryo E13.CNhs11031.389-23F554.12
testis, embryo E15.CNhs11034.443-27C538.55
testis, embryo E16.CNhs11033.470-26G534.61
testis, embryo E17.CNhs11029.486-18I524.67
testis, embryo E18.CNhs11027.503-18G538.02
testis, neonate N00.CNhs11189.1300-22B728.99
testis, neonate N07.CNhs11222.726-26I430.60
testis, neonate N10.CNhs11204.763-44D940.06
testis, neonate N20.CNhs11110.839-18H335.75
testis, neonate N30.CNhs11130.1391-42E229.09
thymus, adult.CNhs10471.38-12B576.47
thymus, embryo E14.CNhs11041.402-44I434.46
thymus, embryo E15.CNhs11005.430-45I254.95
thymus, embryo E16.CNhs11002.456-26C557.94
thymus, embryo E17.CNhs10581.478-18C167.14
thymus, embryo E18.CNhs10595.1273-19G462.58
thymus, neonate N02.CNhs11181.1541-43F869.59
thymus, neonate N03.CNhs11137.2104-43C773.99
thymus, neonate N06.CNhs11197.681-26C474.72
thymus, neonate N07.CNhs11211.713-19D358.68
thymus, neonate N10.CNhs11194.748-24E477.74
thymus, neonate N20.CNhs11186.820-7A283.72
thymus, neonate N25.CNhs11125.1362-25G769.85
thymus, neonate N30.CNhs11132.1393-42G265.68
tongue, adult.CNhs10499.32-1B427.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G531.39
urinary bladder, adult.CNhs10481.879-12E439.80
uterus, adult pregnant day19.CNhs10497.590-15F532.66
uterus, adult.CNhs10509.92-27E544.32
vagina, adult.CNhs10502.89-27D550.59
vesicular gland, adult.CNhs10491.51-27F828.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I840.58
whole body, embryo E12.CNhs10587.857-27C947.08
whole body, embryo E13.CNhs10512.372-23H236.88
whole body, embryo E14.5.CNhs10578.420-27D241.57
whole body, embryo E14.CNhs10519.395-14B129.14
whole body, embryo E16.CNhs10514.453-14F217.83
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.11
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G537.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G525.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G532.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G529.11
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G534.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.03
whole body, embryo E17.5.CNhs10513.490-9F926.04
whole body, embryo E17.CNhs10517.475-3I521.48
whole body, embryo E18.CNhs10516.493-3B334.62
whole body, neonate N00.CNhs10525.657-19C226.21
whole body, neonate N01.CNhs10576.659-23C621.42
whole body, neonate N06.CNhs10515.692-21D121.62
whole body, neonate N10.CNhs10518.761-6B424.11





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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