Personal tools

FFCP PHASE1:Mm9::chr19:41970622..41970645,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_2_at_Rrp12_5end
|description=CAGE_peak_2_at_Rrp12_5end
|id=chr19:41970622..41970645,-
|id=chr19:41970622..41970645,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=2.7225304007815,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,2.06597317506522,33.9300820385517,24.8108397901313,10.6155140299813,5.58405112967355,3.93761678841773,2.88487327982691,0.999329285446988,2.22722794128809,1.39912375625629,1.89277299214943,1.64537320326887,1.69755860719212,2.46625541438102,1.29078236561151,2.35079810225042,0.639969691173627,0.68822784320151,0,0,0.861884930743556,0.380046838912748,0.756090389279792,0.443461021310609,3.81018404075779,3.07532393792285,0,2.02196133825892,0.664938581433969,1.83752420636132,5.4409111995798,4.6880120671428,4.18818995179039,29.9998058895817,3.41522742479223,3.39857247121808,1.25896817975577,0.405507724878058,0.917733760808408,1.56478268869608,1.30815093828268,3.07560655828261,1.36100929351998,2.2397827460058,0,4.02678254538567,5.07753499407941,4.7053131879945,1.28629718017973,0.573066879877513,1.54701627683233,2.63011399117477,2.11596391708813,0.633831403506179,2.37191172448392,0,1.7997994345628,1.97773272513395,2.8419204597844,3.29560121570245,2.30530983192933,1.65903379693564,0.675029691658453,0.210324961351382,4.57041575046086,3.3130281142742,1.34739879136449,0.575072826109418,1.83843757322004,6.60695285996332,5.2351808614927,7.98753972932466,2.63772575460388,3.56801810049398,1.56274011167028,6.97957497503452,10.6924895906019,6.57032465440283,1.47314292736834,1.85083185038834,3.35519002485541,7.87552410665114,2.79614772395106,4.05810284182349,0.860423876981386,23.1190253460635,0,1.29955283489534,2.24013443548668,1.68533304158102,0.511290967734173,0.259786004602869,0.35333957451034,1.69012103732017,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,1.02765491747154,0.776813650941515,0.742210695324124,1.73485326766136,1.21786191324856,1.84492397804847,1.05505848386836,1.29347577849275,1.88499886994513,0.247194967734374,2.4581890676385,2.65383165584962,3.72063754879041,4.41683036920787,2.90925151881133,3.72783522436244,3.51336956413857,3.14170060220183,0.510914110417183,7.42853771936706,4.79922184794726,7.24300294316469,5.09288173976397,2.74500361691176,2.38743269014442,4.86708096538374,6.13717097592793,4.36354893575076,5.353961681236,0.407357455401265,1.11966273549084,0.758168275301024,1.47309299120532,0.910843100738926,0.919608417733892,0,0.452114453507145,0.95251098811859,1.40925092313335,0.937017245597288,2.32833033665114,1.94011193639558,1.51284864134255,1.58356011747554,1.31517439456545,1.94633074457919,1.39300866608867,2.05782136407943,0.995171334092466,7.72434506044558,5.1469581422943,5.39910648851626,0.621377317606506,0.938104239924385,0.540186184383045,0.710234206755631,0.983821158737019,0.462801338662135,0.697601834251224,1.60964040839772,2.10177616260905,2.30383789878873,1.31333971263276,1.70244500046297,0.877199924551994,2.85415149878366,1.47627060636409,4.41608891984667,3.19004298375782,0,1.85115396664481,1.06644125267617,0.464473343720877,0.77320476793256,0.605050573870028,0.889512175379481,0.760902504450237,0.949058123089023,0.988193728344065,1.00534083520108,0.994782360205754,0.974820435595601,0.898819408654221,0.864552199498777,0.597423819763102,0.758671603812327,1.14248512609729,0,0.814605311381257,0.775809948670503,0.49095073923223,0.69560190836683,0.442830443938806,0.627994911365499,1.23397163921801,2.96452627087149,0.500535317148282,1.57247196090562,1.34917267430912,1.42002084971952,1.4470629585145,1.52775511068852,0.575392274901621,1.78348749452539,0.274561413188081,2.87536413054709,0.744281895337007,2.18426371180192,1.26289438973556,2.15276896226295,0.964887042726734,0.369506380333209,1.32643988239339,0.651859905768103,1.35796068620151,0.704070744865506,0.167506257441816,0.238043640886014,1.17080188714679,0.315270288212382,0.221464689648775,0.478364305972461,0.327726629431476,0.690739927463582,0.433947175744535,1.50791283939272,1.63171705145613,3.44234991113325,3.86311444826625,5.29816946959713,5.27452589664914,2.13115428989678,13.6334300690361,1.26203287766503,1.17131623288992,0.646270193198397,0.716906393857656,1.11399337041197,1.13230612315533,0.404810701674894,0.292255857911312,0.790575555893047,2.57057053137446,0.99358059645788,1.06839362200353,1.46598263418218,0.989820737835213,1.32745138339963,2.42780636154981,1.51161778482376,0.565815239267694,0.885905678642318,0.614870295887855,2.84271122485043,1.81766864738753,1.42598951353889,1.26414703174326,0,1.03135543248187,1.70219802876894,1.44048875225048,1.16422815404479,0.428674070063185,2.6601035046341,2.31879462882692,3.1264313914403,3.34911444026059,0.938686832254841,0.63549621259146,0.220528398054962,2.4732937941222,3.87514624070173,2.41251699712623,1.19372344003136,1.64140899745061,0.582961673259701,4.82105785227325,2.05045056957423,1.65109494370578,1.29636169158798,1.13021074202815,1.6403307326523,1.14389086603261,14.6181449794716,10.0765045673034,10.5031980091362,1.90934123603023,0.632671987162271,0.609958401380546,0.648032044930808,1.25452977608681,1.09181281873089,1.07891477107857,0.991841468704031,2.09404753587224,0.777689839750757,0.621339313086926,1.69107881605257,1.64468200648377,1.98550188548517,6.41688921535357,6.58715099736429,3.21016638432478,3.0512882047896,3.1249052362548,7.96931017635402,7.9722759872582,4.60848010012585,0.632022241256357,1.21635129174099,2.15693010046137,0.649604114888975,0.895133478337407,1.19208812868759,0.841368146639782,0.738447635872886,0.302899349844443,0.838274873204998,0.705783295957884,0.779663045918019,0.481059208201647,0.350630706544707,3.40095575422817,1.33191572024439,3.76798197759798,2.85403847818933,0.386379188064381,0.750729901804728,0.549454872801795,2.14368379079066,0.501572104035363,10.1655331671072,7.82552902062201,11.4579102687879,10.3111909406213,7.53590771747707,9.82012066606611,4.72515750162264,4.05289082901798,3.17199686288943,5.1776031175182,1.03787347584177,0.399024873401031,1.70733605754134,0.729320151204882,1.04806581313991,0.735374033800057,3.33370091702423,2.88449080134452,2.56735367673452,2.27427490587418,1.77435509923168,2.45214243801899,1.96647165686753,2.17685518176556,2.23998328926892,0.952587382566147,3.01299247456624,1.54327376370964,2.88460130562315,2.94397840268795,1.37147700954166,2.30718548007139,2.14592570952589,2.32554266611726,2.82328141245992,2.5384382367503,3.47563148458268,1.57841826862706,2.8518863907631,4.48913817326191,2.49133538060766,2.46261205938909,0.818462086339379,1.85924209423159,2.70069255373598,4.24677982494508,0.701794825336225,3.86767897286937,5.54736162999646,2.8676884485537,3.94175320554716
|phase1_expression=2.7225304007815,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,2.06597317506522,33.9300820385517,24.8108397901313,10.6155140299813,5.58405112967355,3.93761678841773,2.88487327982691,0.999329285446988,2.22722794128809,1.39912375625629,1.89277299214943,1.64537320326887,1.69755860719212,2.46625541438102,1.29078236561151,2.35079810225042,0.639969691173627,0.68822784320151,0,0,0.861884930743556,0.380046838912748,0.756090389279792,0.443461021310609,3.81018404075779,3.07532393792285,0,2.02196133825892,0.664938581433969,1.83752420636132,5.4409111995798,4.6880120671428,4.18818995179039,29.9998058895817,3.41522742479223,3.39857247121808,1.25896817975577,0.405507724878058,0.917733760808408,1.56478268869608,1.30815093828268,3.07560655828261,1.36100929351998,2.2397827460058,0,4.02678254538567,5.07753499407941,4.7053131879945,1.28629718017973,0.573066879877513,1.54701627683233,2.63011399117477,2.11596391708813,0.633831403506179,2.37191172448392,0,1.7997994345628,1.97773272513395,2.8419204597844,3.29560121570245,2.30530983192933,1.65903379693564,0.675029691658453,0.210324961351382,4.57041575046086,3.3130281142742,1.34739879136449,0.575072826109418,1.83843757322004,6.60695285996332,5.2351808614927,7.98753972932466,2.63772575460388,3.56801810049398,1.56274011167028,6.97957497503452,10.6924895906019,6.57032465440283,1.47314292736834,1.85083185038834,3.35519002485541,7.87552410665114,2.79614772395106,4.05810284182349,0.860423876981386,23.1190253460635,0,1.29955283489534,2.24013443548668,1.68533304158102,0.511290967734173,0.259786004602869,0.35333957451034,1.69012103732017,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,1.02765491747154,0.776813650941515,0.742210695324124,1.73485326766136,1.21786191324856,1.84492397804847,1.05505848386836,1.29347577849275,1.88499886994513,0.247194967734374,2.4581890676385,2.65383165584962,3.72063754879041,4.41683036920787,2.90925151881133,3.72783522436244,3.51336956413857,3.14170060220183,0.510914110417183,7.42853771936706,4.79922184794726,7.24300294316469,5.09288173976397,2.74500361691176,2.38743269014442,4.86708096538374,6.13717097592793,4.36354893575076,5.353961681236,0.407357455401265,1.11966273549084,0.758168275301024,1.47309299120532,0.910843100738926,0.919608417733892,0,0.452114453507145,0.95251098811859,1.40925092313335,0.937017245597288,2.32833033665114,1.94011193639558,1.51284864134255,1.58356011747554,1.31517439456545,1.94633074457919,1.39300866608867,2.05782136407943,0.995171334092466,7.72434506044558,5.1469581422943,5.39910648851626,0.621377317606506,0.938104239924385,0.540186184383045,0.710234206755631,0.983821158737019,0.462801338662135,0.697601834251224,1.60964040839772,2.10177616260905,2.30383789878873,1.31333971263276,1.70244500046297,0.877199924551994,2.85415149878366,1.47627060636409,4.41608891984667,3.19004298375782,0,1.85115396664481,1.06644125267617,0.464473343720877,0.77320476793256,0.605050573870028,0.889512175379481,0.760902504450237,0.949058123089023,0.988193728344065,1.00534083520108,0.994782360205754,0.974820435595601,0.898819408654221,0.864552199498777,0.597423819763102,0.758671603812327,1.14248512609729,0,0.814605311381257,0.775809948670503,0.49095073923223,0.69560190836683,0.442830443938806,0.627994911365499,1.23397163921801,2.96452627087149,0.500535317148282,1.57247196090562,1.34917267430912,1.42002084971952,1.4470629585145,1.52775511068852,0.575392274901621,1.78348749452539,0.274561413188081,2.87536413054709,0.744281895337007,2.18426371180192,1.26289438973556,2.15276896226295,0.964887042726734,0.369506380333209,1.32643988239339,0.651859905768103,1.35796068620151,0.704070744865506,0.167506257441816,0.238043640886014,1.17080188714679,0.315270288212382,0.221464689648775,0.478364305972461,0.327726629431476,0.690739927463582,0.433947175744535,1.50791283939272,1.63171705145613,3.44234991113325,3.86311444826625,5.29816946959713,5.27452589664914,2.13115428989678,13.6334300690361,1.26203287766503,1.17131623288992,0.646270193198397,0.716906393857656,1.11399337041197,1.13230612315533,0.404810701674894,0.292255857911312,0.790575555893047,2.57057053137446,0.99358059645788,1.06839362200353,1.46598263418218,0.989820737835213,1.32745138339963,2.42780636154981,1.51161778482376,0.565815239267694,0.885905678642318,0.614870295887855,2.84271122485043,1.81766864738753,1.42598951353889,1.26414703174326,0,1.03135543248187,1.70219802876894,1.44048875225048,1.16422815404479,0.428674070063185,2.6601035046341,2.31879462882692,3.1264313914403,3.34911444026059,0.938686832254841,0.63549621259146,0.220528398054962,2.4732937941222,3.87514624070173,2.41251699712623,1.19372344003136,1.64140899745061,0.582961673259701,4.82105785227325,2.05045056957423,1.65109494370578,1.29636169158798,1.13021074202815,1.6403307326523,1.14389086603261,14.6181449794716,10.0765045673034,10.5031980091362,1.90934123603023,0.632671987162271,0.609958401380546,0.648032044930808,1.25452977608681,1.09181281873089,1.07891477107857,0.991841468704031,2.09404753587224,0.777689839750757,0.621339313086926,1.69107881605257,1.64468200648377,1.98550188548517,6.41688921535357,6.58715099736429,3.21016638432478,3.0512882047896,3.1249052362548,7.96931017635402,7.9722759872582,4.60848010012585,0.632022241256357,1.21635129174099,2.15693010046137,0.649604114888975,0.895133478337407,1.19208812868759,0.841368146639782,0.738447635872886,0.302899349844443,0.838274873204998,0.705783295957884,0.779663045918019,0.481059208201647,0.350630706544707,3.40095575422817,1.33191572024439,3.76798197759798,2.85403847818933,0.386379188064381,0.750729901804728,0.549454872801795,2.14368379079066,0.501572104035363,10.1655331671072,7.82552902062201,11.4579102687879,10.3111909406213,7.53590771747707,9.82012066606611,4.72515750162264,4.05289082901798,3.17199686288943,5.1776031175182,1.03787347584177,0.399024873401031,1.70733605754134,0.729320151204882,1.04806581313991,0.735374033800057,3.33370091702423,2.88449080134452,2.56735367673452,2.27427490587418,1.77435509923168,2.45214243801899,1.96647165686753,2.17685518176556,2.23998328926892,0.952587382566147,3.01299247456624,1.54327376370964,2.88460130562315,2.94397840268795,1.37147700954166,2.30718548007139,2.14592570952589,2.32554266611726,2.82328141245992,2.5384382367503,3.47563148458268,1.57841826862706,2.8518863907631,4.48913817326191,2.49133538060766,2.46261205938909,0.818462086339379,1.85924209423159,2.70069255373598,4.24677982494508,0.701794825336225,3.86767897286937,5.54736162999646,2.8676884485537,3.94175320554716
|short_description=p2@Rrp12
|short_description=p2@Rrp12
}}
}}

Revision as of 10:44, 18 April 2012

Short description:p2@Rrp12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rrp12_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000038677, NM_199447, uc008hmk.1_5end
EntrezGene:Rrp12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rrp12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E733.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G930.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D97.88
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.24
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A35.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.63
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.50
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D97.97
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:41970622..41970645,-&oldid=869424"