Personal tools

FFCP PHASE1:Mm9::chr18:90749163..90749237,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_uc008fvw.1_5end
|description=CAGE_peak_1_at_uc008fvw.1_5end
|id=chr18:90749163..90749237,+
|id=chr18:90749163..90749237,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=6.08565618998217,28.964958834067,37.309937629942,88.3195497015944,60.608383323508,25.1818907867835,36.2099592923065,22.4674582788343,3.23814060948833,4.21316147379588,14.2110913627169,10.7692414643704,19.0032810223638,19.4947497394364,5.66286595086627,4.45445588257617,2.09868563438444,17.0349569293448,16.8650753335059,8.06340338416257,8.58937230525805,8.73760370567791,12.015190300391,47.8377344152286,41.5230798731578,31.5827580263261,46.5222955851801,44.3870739332931,31.1638407908453,15.3738379153558,23.5034341294623,1.27006134691926,0.61506478758457,0,11.8429164098023,13.7974755647549,11.0251452381679,7.53356935326434,2.3440060335714,8.89990364755457,11.1763982725893,6.14740936462601,10.1957174136542,15.2335149750449,11.0500855029271,8.62669735159903,5.47673941043627,2.39827672018491,0.878744730937887,2.52758868796568,1.1198913730029,0,5.03347818173209,4.35217285206807,5.04140698713696,2.82985379639542,6.01720223871389,2.57836046138721,0.809265843438391,1.5869729378161,0.633831403506179,3.38844532069132,0,0.449949858640699,0,0,1.49800055259202,0.768436610643109,2.48855069540346,1.35005938331691,1.68259969081106,0.571301968807607,0.662605622854841,2.44981598429908,1.53352753629178,0.919218786610021,13.2139057199266,8.04430229936683,9.21639199537461,2.2420668914133,2.47016637726506,1.04182674111352,3.90856198601933,9.00420176050688,8.09830713217094,4.71405736757868,5.41012387036591,3.16879057903011,5.6794644999888,6.57472572929034,2.89864488701678,10.3250865237766,2.03991400112325,6.47643829965381,18.1937396885347,9.85659151614138,11.2355536105401,9.54409806437123,7.01422212427746,6.36011234118612,5.91542363062058,1.28326477414318,2.54805239706646,0,4.32982082022428,2.53359865475099,6.0662933401774,19.2970756725211,23.0454716445983,9.79718117827843,6.24547176358089,6.08930956624282,4.38169444786511,6.93324146542064,4.58595957829249,5.40366342717605,8.15743393523434,12.5801440520323,5.30766331169925,3.558870698843,4.19598885074748,4.363877278217,29.8226817948995,14.9318206475889,9.21565509979202,27.5893619625279,2.51611761462433,0.599902730993408,1.65191295194984,14.2301107434582,21.0450277296568,7.16229807043327,17.7300806596122,14.8314965251592,16.8308316093244,13.3037835715561,7.43427356107309,6.34475550111474,8.08712826987759,7.57590681191306,12.1012011955314,6.89706313300419,9.54329287968351,10.5493372485001,8.16437989815934,9.09607414022434,8.15205003669641,13.7112786491678,0.862271971731369,7.18603104637713,10.5570674498369,4.16471891612392,7.78532297831674,5.57203466435466,7.40815691068596,10.3497818745616,2.1066395619397,3.3455227924913,1.70498099637356,7.66365358381357,10.5536726991493,8.10279276574567,8.99629995223799,12.199382368339,10.9529650150039,8.37122201101468,9.12129564758705,7.58974725386602,6.7469538464527,7.05920095540109,6.4044359541226,7.30999937126662,6.14740322814942,8.58921080066379,16.1923260394378,11.1136981369627,36.015647345234,27.2384083663451,10.2378360256912,11.6118335930219,10.8248667510558,13.9161631990106,17.3454874198999,22.0661726290569,26.5736274464927,12.8465184684728,20.8608223304224,24.6706025331027,26.3201517610812,28.7622210769351,34.3659499300764,45.4042103019957,1.70701110857774,10.2823661348756,11.270773567308,9.9789150644204,10.861339281387,6.10181633045771,9.23253442014156,9.44704947069454,9.73392112616524,7.52722699922983,12.4510103376603,3.33690211432188,4.12773889737726,3.59779379815766,2.43432145666204,1.68824011826692,4.07401362850272,5.75392274901621,6.48540907100142,4.66754402419738,11.5014565221884,10.0478055870496,8.42501717409313,7.07220858251913,8.07288360848605,11.5786445127208,11.6394509804961,8.33762211790133,6.51859905768104,7.63852885988347,9.85699042811709,7.53778158488171,6.42717830392237,5.46374214001837,7.72412206120336,10.4088404134924,6.69710028361446,12.4536119183961,8.11619414769709,10.4147322178688,16.5870412333199,5.4390568381871,6.39293554924747,6.62248191131358,12.0412942490844,10.9006868530749,7.21313759657372,5.80683132570058,4.73262329124385,7.02789739733949,6.24727853425117,8.84184552424442,9.80314165962534,6.79383673893198,6.47697122679831,10.8134667427185,13.4397844501818,15.4234231882467,14.0520684356186,4.45164009168138,8.30723492703238,18.3116836499514,9.2921596837974,8.25454162926937,6.95344181018927,28.2907619633847,5.90603785761546,31.6658202382245,19.6405502807848,18.9037539328303,15.329387270543,22.1225730555071,17.9211634577498,11.3449097573006,36.4270378156553,12.2441543941291,1.16422815404479,7.07312215604255,14.0098784577396,9.45354733290974,9.54384319492302,2.43571959291679,6.33613611772018,5.93129798418696,6.17479514553893,12.366468970611,4.19807509409354,5.91066664295927,3.58117032009409,3.93938159388147,35.5606620688418,10.5692422145991,6.66396435111626,5.98521917093345,5.37064129372164,5.46268525313604,3.96413260390973,6.17701067657611,2.37969801991397,1.6794174278839,2.76399947608848,11.4560474161814,9.33191181064349,9.55601495496189,9.61247533314031,10.6635030967379,12.0099410060398,11.0588764035553,9.09188012978695,13.0877970992015,32.4037433229482,9.32008969630389,2.81846469342095,14.353588420222,4.63283773279873,11.0837177356107,8.26622870257479,10.644235905919,7.04143431874524,9.24451132392046,12.687980675511,14.0118790079084,8.64090018773596,11.6924114632426,4.66267995167378,9.44940805916411,7.40548690973432,7.16106782669926,8.14593554603186,6.73094517311826,9.15675068482379,10.7024436945036,11.049986964975,9.07435666231565,7.40679893622118,6.92725259810372,12.1551978268832,8.16229381014761,3.55177525398503,8.25367480807176,7.72269235274761,11.9777548299958,5.63047426353546,14.4689783171139,3.42989406526505,9.5298699766719,12.4245405375755,13.3494318587081,15.4681788628637,9.45192502890282,10.9613203163303,10.5755145634558,9.45031500324528,18.463169332193,17.2194115413998,14.497288729051,10.3787347584177,5.1873233542134,8.36594668195257,7.77941494618541,5.44994222832754,4.77993121970037,5.778414922842,8.24140228955577,5.45562656306086,7.58091635291392,5.0695859978048,8.67681170375951,8.61501868722918,9.21962194630118,8.84506221916444,9.52587382566147,4.98302601562879,7.13764115715709,5.76920261124629,9.42073088860143,8.9146005620208,7.27650805253284,8.10683045820891,7.99405291477807,8.18751609613376,7.36147088657586,5.48783918618318,7.10288220882176,8.41985505844343,7.85599180320834,5.81311588808453,5.31924204828043,6.13846564754534,7.43696837692637,5.5942917184531,4.99621155875892,7.48581147025307,9.02458427002853,4.97349663378993,5.95596831622692,6.95603506861264
|phase1_expression=6.08565618998217,28.964958834067,37.309937629942,88.3195497015944,60.608383323508,25.1818907867835,36.2099592923065,22.4674582788343,3.23814060948833,4.21316147379588,14.2110913627169,10.7692414643704,19.0032810223638,19.4947497394364,5.66286595086627,4.45445588257617,2.09868563438444,17.0349569293448,16.8650753335059,8.06340338416257,8.58937230525805,8.73760370567791,12.015190300391,47.8377344152286,41.5230798731578,31.5827580263261,46.5222955851801,44.3870739332931,31.1638407908453,15.3738379153558,23.5034341294623,1.27006134691926,0.61506478758457,0,11.8429164098023,13.7974755647549,11.0251452381679,7.53356935326434,2.3440060335714,8.89990364755457,11.1763982725893,6.14740936462601,10.1957174136542,15.2335149750449,11.0500855029271,8.62669735159903,5.47673941043627,2.39827672018491,0.878744730937887,2.52758868796568,1.1198913730029,0,5.03347818173209,4.35217285206807,5.04140698713696,2.82985379639542,6.01720223871389,2.57836046138721,0.809265843438391,1.5869729378161,0.633831403506179,3.38844532069132,0,0.449949858640699,0,0,1.49800055259202,0.768436610643109,2.48855069540346,1.35005938331691,1.68259969081106,0.571301968807607,0.662605622854841,2.44981598429908,1.53352753629178,0.919218786610021,13.2139057199266,8.04430229936683,9.21639199537461,2.2420668914133,2.47016637726506,1.04182674111352,3.90856198601933,9.00420176050688,8.09830713217094,4.71405736757868,5.41012387036591,3.16879057903011,5.6794644999888,6.57472572929034,2.89864488701678,10.3250865237766,2.03991400112325,6.47643829965381,18.1937396885347,9.85659151614138,11.2355536105401,9.54409806437123,7.01422212427746,6.36011234118612,5.91542363062058,1.28326477414318,2.54805239706646,0,4.32982082022428,2.53359865475099,6.0662933401774,19.2970756725211,23.0454716445983,9.79718117827843,6.24547176358089,6.08930956624282,4.38169444786511,6.93324146542064,4.58595957829249,5.40366342717605,8.15743393523434,12.5801440520323,5.30766331169925,3.558870698843,4.19598885074748,4.363877278217,29.8226817948995,14.9318206475889,9.21565509979202,27.5893619625279,2.51611761462433,0.599902730993408,1.65191295194984,14.2301107434582,21.0450277296568,7.16229807043327,17.7300806596122,14.8314965251592,16.8308316093244,13.3037835715561,7.43427356107309,6.34475550111474,8.08712826987759,7.57590681191306,12.1012011955314,6.89706313300419,9.54329287968351,10.5493372485001,8.16437989815934,9.09607414022434,8.15205003669641,13.7112786491678,0.862271971731369,7.18603104637713,10.5570674498369,4.16471891612392,7.78532297831674,5.57203466435466,7.40815691068596,10.3497818745616,2.1066395619397,3.3455227924913,1.70498099637356,7.66365358381357,10.5536726991493,8.10279276574567,8.99629995223799,12.199382368339,10.9529650150039,8.37122201101468,9.12129564758705,7.58974725386602,6.7469538464527,7.05920095540109,6.4044359541226,7.30999937126662,6.14740322814942,8.58921080066379,16.1923260394378,11.1136981369627,36.015647345234,27.2384083663451,10.2378360256912,11.6118335930219,10.8248667510558,13.9161631990106,17.3454874198999,22.0661726290569,26.5736274464927,12.8465184684728,20.8608223304224,24.6706025331027,26.3201517610812,28.7622210769351,34.3659499300764,45.4042103019957,1.70701110857774,10.2823661348756,11.270773567308,9.9789150644204,10.861339281387,6.10181633045771,9.23253442014156,9.44704947069454,9.73392112616524,7.52722699922983,12.4510103376603,3.33690211432188,4.12773889737726,3.59779379815766,2.43432145666204,1.68824011826692,4.07401362850272,5.75392274901621,6.48540907100142,4.66754402419738,11.5014565221884,10.0478055870496,8.42501717409313,7.07220858251913,8.07288360848605,11.5786445127208,11.6394509804961,8.33762211790133,6.51859905768104,7.63852885988347,9.85699042811709,7.53778158488171,6.42717830392237,5.46374214001837,7.72412206120336,10.4088404134924,6.69710028361446,12.4536119183961,8.11619414769709,10.4147322178688,16.5870412333199,5.4390568381871,6.39293554924747,6.62248191131358,12.0412942490844,10.9006868530749,7.21313759657372,5.80683132570058,4.73262329124385,7.02789739733949,6.24727853425117,8.84184552424442,9.80314165962534,6.79383673893198,6.47697122679831,10.8134667427185,13.4397844501818,15.4234231882467,14.0520684356186,4.45164009168138,8.30723492703238,18.3116836499514,9.2921596837974,8.25454162926937,6.95344181018927,28.2907619633847,5.90603785761546,31.6658202382245,19.6405502807848,18.9037539328303,15.329387270543,22.1225730555071,17.9211634577498,11.3449097573006,36.4270378156553,12.2441543941291,1.16422815404479,7.07312215604255,14.0098784577396,9.45354733290974,9.54384319492302,2.43571959291679,6.33613611772018,5.93129798418696,6.17479514553893,12.366468970611,4.19807509409354,5.91066664295927,3.58117032009409,3.93938159388147,35.5606620688418,10.5692422145991,6.66396435111626,5.98521917093345,5.37064129372164,5.46268525313604,3.96413260390973,6.17701067657611,2.37969801991397,1.6794174278839,2.76399947608848,11.4560474161814,9.33191181064349,9.55601495496189,9.61247533314031,10.6635030967379,12.0099410060398,11.0588764035553,9.09188012978695,13.0877970992015,32.4037433229482,9.32008969630389,2.81846469342095,14.353588420222,4.63283773279873,11.0837177356107,8.26622870257479,10.644235905919,7.04143431874524,9.24451132392046,12.687980675511,14.0118790079084,8.64090018773596,11.6924114632426,4.66267995167378,9.44940805916411,7.40548690973432,7.16106782669926,8.14593554603186,6.73094517311826,9.15675068482379,10.7024436945036,11.049986964975,9.07435666231565,7.40679893622118,6.92725259810372,12.1551978268832,8.16229381014761,3.55177525398503,8.25367480807176,7.72269235274761,11.9777548299958,5.63047426353546,14.4689783171139,3.42989406526505,9.5298699766719,12.4245405375755,13.3494318587081,15.4681788628637,9.45192502890282,10.9613203163303,10.5755145634558,9.45031500324528,18.463169332193,17.2194115413998,14.497288729051,10.3787347584177,5.1873233542134,8.36594668195257,7.77941494618541,5.44994222832754,4.77993121970037,5.778414922842,8.24140228955577,5.45562656306086,7.58091635291392,5.0695859978048,8.67681170375951,8.61501868722918,9.21962194630118,8.84506221916444,9.52587382566147,4.98302601562879,7.13764115715709,5.76920261124629,9.42073088860143,8.9146005620208,7.27650805253284,8.10683045820891,7.99405291477807,8.18751609613376,7.36147088657586,5.48783918618318,7.10288220882176,8.41985505844343,7.85599180320834,5.81311588808453,5.31924204828043,6.13846564754534,7.43696837692637,5.5942917184531,4.99621155875892,7.48581147025307,9.02458427002853,4.97349663378993,5.95596831622692,6.95603506861264
|short_description=p1@uc008fvw.1
|short_description=p1@uc008fvw.1
}}
}}

Revision as of 10:04, 18 April 2012

Short description:p1@uc008fvw.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_uc008fvw.1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_uc008fvw.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@uc008fvw.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I637.31
CD326+ enterocyte, pool1.CNhs13542.11848-124I388.32
CD326+ enterocyte, pool2.CNhs13197.11849-124I460.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I836.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.03
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.02
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D147.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.52
GP2+ M cell, pool1.CNhs13228.11845-124H931.58
GP2+ M cell, pool2.CNhs13231.11846-124I146.52
GP2+ M cell, pool3.CNhs13240.11847-124I244.39
Ileum epithelium, pool1.CNhs13199.10252-104B931.16
Ileum epithelium, pool2.CNhs13232.10253-104C115.37
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D95.68
Mouse Schwann, donor2.CNhs12573.11746-123F96.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.30
accessory axillary lymph node, adult.CNhs10475.1063-29H923.05
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I35.40
amnion, adult pregnant day17.5.CNhs10488.583-22A88.16
aorta, adult.CNhs10498.46-23H112.58
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H727.59
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A414.23
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D517.73
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F216.83
diencephalon, neonate N30.CNhs11201.1388-42B213.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D410.55
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G88.15
eyeball, neonate N16.CNhs11188.777-19A213.71
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E210.56
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I98.10
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C812.20
heart, embryo E16.CNhs11021.457-17C610.95
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E37.59
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G16.40
heart, neonate N20.CNhs11127.821-26I67.31
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D28.59
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G111.11
intestinal mucosa, adult.CNhs10506.860-29I336.02
intestine, adult.CNhs10496.178-9A327.24
intestine, embryo E12.CNhs11019.1251-16I510.24
intestine, embryo E13.CNhs11010.381-16D511.61
intestine, embryo E15.CNhs10602.976-16D810.82
intestine, embryo E16.CNhs10585.463-22H413.92
intestine, embryo E17.CNhs10582.482-18D317.35
intestine, embryo E18.CNhs10526.1289-20F722.07
intestine, neonate N00.CNhs11126.644-26D126.57
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B820.86
intestine, neonate N07.CNhs11095.720-20F224.67
intestine, neonate N10.CNhs11098.755-23A526.32
intestine, neonate N20.CNhs11187.827-18D128.76
intestine, neonate N25.CNhs11121.1352-25E334.37
intestine, neonate N30.CNhs11131.1384-42G145.40
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F810.28
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I29.98
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G76.10
kidney, neonate N10.CNhs11206.758-6D59.23
kidney, neonate N20.CNhs11113.832-19I19.45
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H17.53
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B111.64
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B69.86
lung, embryo E17.CNhs10605.480-44A67.54
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A310.41
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A412.45
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I714.05
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G618.31
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E528.29
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I731.67
pancreas, neonate N00.CNhs11105.645-26G919.64
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B622.12
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G836.43
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B914.01
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G35.93
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H35.91
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I135.56
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G26.66
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E39.33
stomach, embryo E15.CNhs10603.1252-16G89.56
stomach, embryo E16.CNhs11022.459-17D49.61
stomach, embryo E17.CNhs11006.1035-18D510.66
stomach, embryo E18.CNhs10999.1286-20C612.01
stomach, neonate N03.CNhs11193.1340-24B811.06
stomach, neonate N07.CNhs11210.718-18A99.09
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I132.40
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F514.35
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G511.08
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G510.64
testis, neonate N00.CNhs11189.1300-22B77.04
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D912.69
testis, neonate N20.CNhs11110.839-18H314.01
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I29.45
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C79.16
thymus, neonate N06.CNhs11197.681-26C410.70
thymus, neonate N07.CNhs11211.713-19D311.05
thymus, neonate N10.CNhs11194.748-24E49.07
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G76.93
thymus, neonate N30.CNhs11132.1393-42G212.16
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.25
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E514.47
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I810.38
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.44
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C29.02
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:90749163..90749237,%2B&oldid=864285"