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FFCP PHASE1:Mm9::chr17:34169016..34169068,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:34169016..34169068,+
|short_description=p2@Rxrb
|description=CAGE_peak_2_at_Rxrb_5end
|association_with_transcript=-59bp_to_ENSMUST00000174299_5end
|EntrezGene=20182
|EntrezGene=20182
|HGNC=
|HGNC=
|UniProt=G3UXP8
|UniProt=G3UXP8
|association_with_transcript=-59bp_to_ENSMUST00000174299_5end
|description=CAGE_peak_2_at_Rxrb_5end
|id=chr17:34169016..34169068,+
|ontology_enrichment_disease=
|phase1_expression=11.3705681444404,1.04692622291808,3.18499467572675,3.93203474698879,3.50627010962443,4.36486106970913,3.97141489012394,2.96983643915625,1.54867594366833,1.40438715793196,2.73948749160808,1.7549874978974,1.02720437958723,2.44777126773193,3.66420737997229,4.45445588257617,5.59649502502517,6.78243655520211,4.9361196098066,6.79023442876848,7.313722952992,6.35462087685666,9.14199261986274,4.15980299262857,4.35877634027623,0,4.30761996159075,2.15471232685889,3.80046838912748,4.53654233567875,4.43461021310609,12.7006134691926,9.84103660135312,0,8.08784535303569,5.81821258754723,5.10423390655923,2.09265815368454,3.906676722619,3.14114246384279,1.17646297606203,2.04913645487534,3.39857247121808,6.04304726282771,4.76471576731718,4.22157529971868,21.1245662973971,5.01457859675027,6.15121311656521,7.58276606389705,4.75953833526233,11.5002051491977,7.04686945442493,7.25362142011344,4.03312558970957,2.31533492432352,2.86533439938757,1.54701627683233,18.8154308599426,14.8117474196169,21.5502677192101,5.08266798103698,13.3394219416671,9.89889689009539,13.8441290759376,10.6572017241915,11.3848041996994,15.7529505181837,9.53944433237994,14.1756235248275,11.567872874326,18.2816630018434,16.3442720304194,11.6366259254206,7.47594673942244,11.9498442259303,34.1359231098105,19.6638500651189,19.5080297235429,15.8263545276233,14.3635600455783,18.7528813400434,25.1264699101243,18.0084035210138,15.4326230254578,10.606629077052,14.8066548031067,19.7583412574819,3.86203585999239,3.70300644523249,5.79728977403356,4.30211938490693,8.15965600449301,2.69851595818909,7.14754059192436,8.51251085484938,4.21333260395256,3.74946709671727,5.19572009205738,4.94675404314476,9.99988280414432,7.69958864485907,25.4805239706646,21.3320010945999,6.49473123033642,6.08063677140237,9.60496445528088,6.73684890342454,2.07150306917737,5.04703272820404,4.68410382268567,5.1759131313064,4.15107895060905,4.06951129492081,6.11461277105665,3.76999773989026,1.73036477414062,3.32578520915797,6.19227386364912,4.52947179852746,7.95029466457417,5.33362778448744,13.0474232852686,13.1751358655196,16.7557365450764,4.08731288333746,9.22576458695586,8.99854096490112,6.98886248901856,12.8819949888148,14.1825186873774,13.5706700281894,10.7771078519211,8.18289463457058,12.0517065844545,10.2211995732687,7.12875546952214,5.10068579501381,3.53811861807145,4.8401626853889,8.58794923553845,8.73627996847197,11.7040384373477,8.43946979880004,11.0219128625151,8.07116437794554,9.7449793542118,7.24369438069244,6.46703978798527,7.18603104637713,6.15828934573821,7.89104636739269,5.83899223373756,6.61679116392116,4.93877127379064,5.7719937377363,2.80885274925294,8.4924809347856,9.94572247884574,3.72826390563903,3.98694301967864,3.06105504483725,5.44512891845984,6.09969118416952,5.09081472528348,3.25547522650571,4.02410102099429,8.75740067753771,5.75959474697182,5.58169377868924,6.48550476366846,6.14039947186396,6.14740322814942,7.78397228810156,9.67333763394985,8.74689205223918,2.31293148088659,2.3800550999719,8.10495352033889,3.71578674976702,4.12375876230699,4.84040459096022,3.11329261382818,1.71203063501303,1.42358718463353,3.78807595865225,6.03204501120647,4.97391180102877,4.67913809085888,4.49409704327111,4.75503709724327,2.78797782556114,8.34538764193559,5.48392860526698,5.63538678365402,5.09128319613286,6.40043207653165,7.85521182771568,5.37510565556187,5.01874503130647,3.61097074035162,4.44229790118482,2.96452627087149,2.50267658574141,2.16214894624523,1.57403478669398,1.82574109249653,1.68824011826692,3.05551022137704,3.16465751195892,10.3766545136023,3.84385978463314,7.18841032636773,7.07067800570156,1.87222603868736,3.03094653536534,3.40855085691633,8.20153986317724,5.72734889516475,6.63219941196697,7.33342393989116,8.48725428875941,4.92849521405854,7.20276906999808,5.71304738126433,9.56154874503214,4.41378403497335,6.64394068946325,3.18909537314974,4.42430949732493,3.28101465545202,6.65385669474953,10.5553898757491,8.15858525728064,0.491764273019036,6.89841865761831,12.2018448390722,11.2523219128515,3.44263385291018,5.55436039849621,5.36363973007636,3.12350995437311,7.75524231838076,5.73525115086125,6.46116154838943,11.3230612315533,7.69140333182299,5.84511715822624,5.92931666919785,8.9969968598106,5.25178315270594,6.7664929393557,9.61033060186099,5.77395430403874,9.2921596837974,5.09839335925461,5.13950046840077,4.33791683438566,8.26845300066164,4.61152721915891,3.6179961043551,8.72480950746013,6.77345018930971,5.68866164284469,3.16255825724996,9.28219889233682,8.17055053809091,10.443543453816,8.27895576209629,10.9311887866112,5.67488747655275,5.88617098086833,7.0756078858912,21.9214763362511,1.17335854031855,3.1774810629573,5.51320995137405,6.76033637060068,5.8127193610526,2.47282992205439,3.46179797609096,2.79039529566604,4.66369338607761,7.97328798645192,2.56306321196779,5.15967169908056,2.96311243791539,3.57900068308913,3.8274383761887,3.43167259809784,4.9293744698218,8.25713568709582,8.153798454461,3.81868247206045,9.49007980743406,4.67634774391752,4.86024033698106,3.97267762427491,4.58561383866973,4.5853877770839,6.19900917940019,5.75863072364865,4.14767914533737,5.59205381778233,8.45539408026285,6.42921147989109,5.46013018508422,4.86127970860119,3.48731523389874,4.05494701177868,7.04143431874524,7.29144555126121,7.34015410979976,8.69702834973622,6.62469014393091,4.74016680942267,7.09538253515575,5.44368072973584,5.1968329191118,6.08690765269437,6.35780335300048,4.68762253127878,6.4983391956814,2.42319479875554,5.94413091908999,6.957006774442,6.33476224808391,4.13710919053417,7.01261413089414,3.62768613784338,1.99787358036658,2.06341870201794,1.51096154727671,7.53439416725543,3.56596703357246,5.12824547948342,4.07299920250225,7.52358156053045,9.60078132449013,11.5081309126794,13.7494923225455,18.5601436931183,17.8121455140367,12.0863023582352,14.1754725048679,6.75481804836331,5.89085131679466,16.5683299760582,9.13328658740755,7.58147259461959,10.2440163452481,3.64660075602441,7.1268475293514,7.16989682955055,5.55616819504038,6.38708677440572,4.1719497246936,6.31743029409494,5.57654459758527,5.47016390019621,6.367622507952,6.4665403928918,5.11175673704958,5.23923060411381,6.14186927507734,7.5234595980845,9.47797571847605,4.85756436443511,7.54312355247914,4.2594193478241,3.33810665926249,3.92435324907287,5.8347815857505,3.9768865709088,5.48783918618318,2.63069711437843,5.83957689537206,4.48913817326191,5.45721083371201,6.10727790728493,4.09231043169689,6.35241048862461,4.82266527452853,9.242991383704,5.14649538579898,6.23126056740065,10.7121465958552,5.95596831622692,5.10109238364927
|phase1_expression=11.3705681444404,1.04692622291808,3.18499467572675,3.93203474698879,3.50627010962443,4.36486106970913,3.97141489012394,2.96983643915625,1.54867594366833,1.40438715793196,2.73948749160808,1.7549874978974,1.02720437958723,2.44777126773193,3.66420737997229,4.45445588257617,5.59649502502517,6.78243655520211,4.9361196098066,6.79023442876848,7.313722952992,6.35462087685666,9.14199261986274,4.15980299262857,4.35877634027623,0,4.30761996159075,2.15471232685889,3.80046838912748,4.53654233567875,4.43461021310609,12.7006134691926,9.84103660135312,0,8.08784535303569,5.81821258754723,5.10423390655923,2.09265815368454,3.906676722619,3.14114246384279,1.17646297606203,2.04913645487534,3.39857247121808,6.04304726282771,4.76471576731718,4.22157529971868,21.1245662973971,5.01457859675027,6.15121311656521,7.58276606389705,4.75953833526233,11.5002051491977,7.04686945442493,7.25362142011344,4.03312558970957,2.31533492432352,2.86533439938757,1.54701627683233,18.8154308599426,14.8117474196169,21.5502677192101,5.08266798103698,13.3394219416671,9.89889689009539,13.8441290759376,10.6572017241915,11.3848041996994,15.7529505181837,9.53944433237994,14.1756235248275,11.567872874326,18.2816630018434,16.3442720304194,11.6366259254206,7.47594673942244,11.9498442259303,34.1359231098105,19.6638500651189,19.5080297235429,15.8263545276233,14.3635600455783,18.7528813400434,25.1264699101243,18.0084035210138,15.4326230254578,10.606629077052,14.8066548031067,19.7583412574819,3.86203585999239,3.70300644523249,5.79728977403356,4.30211938490693,8.15965600449301,2.69851595818909,7.14754059192436,8.51251085484938,4.21333260395256,3.74946709671727,5.19572009205738,4.94675404314476,9.99988280414432,7.69958864485907,25.4805239706646,21.3320010945999,6.49473123033642,6.08063677140237,9.60496445528088,6.73684890342454,2.07150306917737,5.04703272820404,4.68410382268567,5.1759131313064,4.15107895060905,4.06951129492081,6.11461277105665,3.76999773989026,1.73036477414062,3.32578520915797,6.19227386364912,4.52947179852746,7.95029466457417,5.33362778448744,13.0474232852686,13.1751358655196,16.7557365450764,4.08731288333746,9.22576458695586,8.99854096490112,6.98886248901856,12.8819949888148,14.1825186873774,13.5706700281894,10.7771078519211,8.18289463457058,12.0517065844545,10.2211995732687,7.12875546952214,5.10068579501381,3.53811861807145,4.8401626853889,8.58794923553845,8.73627996847197,11.7040384373477,8.43946979880004,11.0219128625151,8.07116437794554,9.7449793542118,7.24369438069244,6.46703978798527,7.18603104637713,6.15828934573821,7.89104636739269,5.83899223373756,6.61679116392116,4.93877127379064,5.7719937377363,2.80885274925294,8.4924809347856,9.94572247884574,3.72826390563903,3.98694301967864,3.06105504483725,5.44512891845984,6.09969118416952,5.09081472528348,3.25547522650571,4.02410102099429,8.75740067753771,5.75959474697182,5.58169377868924,6.48550476366846,6.14039947186396,6.14740322814942,7.78397228810156,9.67333763394985,8.74689205223918,2.31293148088659,2.3800550999719,8.10495352033889,3.71578674976702,4.12375876230699,4.84040459096022,3.11329261382818,1.71203063501303,1.42358718463353,3.78807595865225,6.03204501120647,4.97391180102877,4.67913809085888,4.49409704327111,4.75503709724327,2.78797782556114,8.34538764193559,5.48392860526698,5.63538678365402,5.09128319613286,6.40043207653165,7.85521182771568,5.37510565556187,5.01874503130647,3.61097074035162,4.44229790118482,2.96452627087149,2.50267658574141,2.16214894624523,1.57403478669398,1.82574109249653,1.68824011826692,3.05551022137704,3.16465751195892,10.3766545136023,3.84385978463314,7.18841032636773,7.07067800570156,1.87222603868736,3.03094653536534,3.40855085691633,8.20153986317724,5.72734889516475,6.63219941196697,7.33342393989116,8.48725428875941,4.92849521405854,7.20276906999808,5.71304738126433,9.56154874503214,4.41378403497335,6.64394068946325,3.18909537314974,4.42430949732493,3.28101465545202,6.65385669474953,10.5553898757491,8.15858525728064,0.491764273019036,6.89841865761831,12.2018448390722,11.2523219128515,3.44263385291018,5.55436039849621,5.36363973007636,3.12350995437311,7.75524231838076,5.73525115086125,6.46116154838943,11.3230612315533,7.69140333182299,5.84511715822624,5.92931666919785,8.9969968598106,5.25178315270594,6.7664929393557,9.61033060186099,5.77395430403874,9.2921596837974,5.09839335925461,5.13950046840077,4.33791683438566,8.26845300066164,4.61152721915891,3.6179961043551,8.72480950746013,6.77345018930971,5.68866164284469,3.16255825724996,9.28219889233682,8.17055053809091,10.443543453816,8.27895576209629,10.9311887866112,5.67488747655275,5.88617098086833,7.0756078858912,21.9214763362511,1.17335854031855,3.1774810629573,5.51320995137405,6.76033637060068,5.8127193610526,2.47282992205439,3.46179797609096,2.79039529566604,4.66369338607761,7.97328798645192,2.56306321196779,5.15967169908056,2.96311243791539,3.57900068308913,3.8274383761887,3.43167259809784,4.9293744698218,8.25713568709582,8.153798454461,3.81868247206045,9.49007980743406,4.67634774391752,4.86024033698106,3.97267762427491,4.58561383866973,4.5853877770839,6.19900917940019,5.75863072364865,4.14767914533737,5.59205381778233,8.45539408026285,6.42921147989109,5.46013018508422,4.86127970860119,3.48731523389874,4.05494701177868,7.04143431874524,7.29144555126121,7.34015410979976,8.69702834973622,6.62469014393091,4.74016680942267,7.09538253515575,5.44368072973584,5.1968329191118,6.08690765269437,6.35780335300048,4.68762253127878,6.4983391956814,2.42319479875554,5.94413091908999,6.957006774442,6.33476224808391,4.13710919053417,7.01261413089414,3.62768613784338,1.99787358036658,2.06341870201794,1.51096154727671,7.53439416725543,3.56596703357246,5.12824547948342,4.07299920250225,7.52358156053045,9.60078132449013,11.5081309126794,13.7494923225455,18.5601436931183,17.8121455140367,12.0863023582352,14.1754725048679,6.75481804836331,5.89085131679466,16.5683299760582,9.13328658740755,7.58147259461959,10.2440163452481,3.64660075602441,7.1268475293514,7.16989682955055,5.55616819504038,6.38708677440572,4.1719497246936,6.31743029409494,5.57654459758527,5.47016390019621,6.367622507952,6.4665403928918,5.11175673704958,5.23923060411381,6.14186927507734,7.5234595980845,9.47797571847605,4.85756436443511,7.54312355247914,4.2594193478241,3.33810665926249,3.92435324907287,5.8347815857505,3.9768865709088,5.48783918618318,2.63069711437843,5.83957689537206,4.48913817326191,5.45721083371201,6.10727790728493,4.09231043169689,6.35241048862461,4.82266527452853,9.242991383704,5.14649538579898,6.23126056740065,10.7121465958552,5.95596831622692,5.10109238364927
|short_description=p2@Rxrb
}}
}}

Revision as of 01:48, 18 April 2012

Short description:p2@Rxrb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rxrb_5end
Coexpression cluster:NA
Association with transcript: -59bp_to_ENSMUST00000174299_5end
EntrezGene:Rxrb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rxrb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C318.82
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E815.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.54
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.76
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F93.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D75.05
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I216.76
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F113.57
cortex, adult.CNhs10473.12-14D510.78
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B210.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C68.59
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D48.44
eyeball, neonate N00.CNhs11207.633-15C611.02
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G89.74
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E26.16
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.49
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.95
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C65.09
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E38.76
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G16.49
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D27.78
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G18.75
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I98.35
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G77.86
kidney, neonate N10.CNhs11206.758-6D55.38
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F410.38
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F87.33
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C69.56
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A311.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I49.61
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E54.34
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E921.92
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E39.49
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A96.20
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B77.04
testis, neonate N07.CNhs11222.726-26I47.29
testis, neonate N10.CNhs11204.763-44D97.34
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I47.10
thymus, embryo E15.CNhs11005.430-45I25.44
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D35.94
thymus, neonate N10.CNhs11194.748-24E46.96
thymus, neonate N20.CNhs11186.820-7A26.33
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I89.13
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H210.24
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B45.10





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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