Personal tools

FFCP PHASE1:Mm9::chr17:32173344..32173398,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:32173344..32173398,+
|short_description=p1@Rrp1b
|description=CAGE_peak_1_at_Rrp1b_5end
|association_with_transcript=0bp_to_ENSMUST00000151808,ENSMUST00000156164_5end
|EntrezGene=72462
|EntrezGene=72462
|HGNC=
|HGNC=
|UniProt=D6RDD0
|UniProt=D6RDD0
|association_with_transcript=0bp_to_ENSMUST00000151808,ENSMUST00000156164_5end
|description=CAGE_peak_1_at_Rrp1b_5end
|id=chr17:32173344..32173398,+
|ontology_enrichment_disease=
|phase1_expression=9.92922852049723,1.04692622291808,0.454999239389536,1.51232105653415,0,10.0727563147134,11.9142446703718,25.1790480711074,91.6534581207351,118.904779371573,119.167705884951,127.874770869524,22.9408978107816,23.3412474458723,19.9865857089398,13.1608923803387,9.79386629379405,14.1957974411207,13.3001000597567,10.6097412949508,7.82398269389842,21.8440092641948,21.4183827093927,5.27974995218242,6.65286915094793,0,3.01533397311352,5.38678081714723,3.23039813075836,5.54466285471848,7.31710685162506,57.7877912848264,47.9750534315965,31.6963362030877,15.0202842270663,17.1221684719247,18.5794114198756,7.95210098400125,17.9707129240474,10.9939986234498,3.52938892818609,11.6117732442936,8.25367600152961,9.31636453019272,10.3404469843905,11.5634453861859,5.47673941043627,9.81113203712009,6.81027166476863,6.9994763666742,9.23910382727393,4.31257693094915,13.4226084846189,9.42970784614748,14.1159395639835,5.91696702882678,8.30946975822394,8.76642556871652,12.1389876515759,17.4567023159771,15.2119536841483,6.09920157724438,7.11435836888911,4.04954872776629,7.9109309005358,7.8152812644071,4.19440154725767,4.2264013585371,15.0349937847293,18.3608076131099,11.567872874326,9.99778445413313,7.73039893330647,17.8836566853833,15.814502718009,19.3035945188104,11.0115880999389,9.57655035638908,7.68032666281217,12.3973110466382,12.4423195299277,16.1483144872596,5.58365998002762,7.31591393041184,9.0150966188318,12.9636577608414,12.6710795911202,12.4887628702951,13.8578933799727,6.42358260907677,12.1743085254705,6.0229671388697,18.3592260101093,5.39703191637817,7.79731700937203,7.16843019355737,4.63466586434781,5.45377032249785,5.97507810586598,5.3000936176551,5.63373679106722,10.2661181931454,7.64415719119937,0,7.79367747640371,12.6679932737549,13.1436355703844,5.25245846707676,20.4560928081266,9.64873903921361,20.1242979048718,11.8741536541735,10.6083128737787,11.0027527603414,10.2302175208063,5.27799683584637,7.16865406429684,6.65157041831594,8.84610551949874,13.9119490954772,9.27534377533653,9.69750506270444,1.86391761218122,6.73395833126558,8.3778682725382,7.40825460104915,18.8109745474295,10.7982491578813,19.1876042880328,10.7849260371472,17.3850229071078,16.0837570704466,7.47444576826789,7.41574826257959,7.2725815595846,9.73447578406546,14.155671575194,8.21086006026614,8.59257378674494,11.995185785529,21.9903548606969,17.7024620413774,15.1252189036493,12.5084998803643,16.6689422920753,17.039124797885,13.3056448874815,36.7358786449402,27.1615671095381,20.9907748986279,23.0495972654773,18.6316372563439,16.1267404550847,14.626590993931,15.4336602305958,21.0976322827603,23.87524836865,19.5584409407184,23.3014069504386,19.2626968458017,12.6644072389792,13.6847166710371,14.678173606283,9.05115466038058,10.181629450567,7.67362017676346,6.9751084363901,8.52386999280337,9.54447129498187,6.07419617092652,8.59329381186071,8.77199924551994,7.02560368931362,6.1734952629771,9.04246778825747,13.9950272835827,1.65209391491899,8.19796756656987,23.8882840599462,24.8493238890669,19.2012517369919,13.3111126251406,10.229390016864,9.13083005340284,8.0669940462567,7.5761519173045,7.28872105520782,5.76973768919337,8.57841983324129,8.08937467788799,6.70027954611552,6.96994456390285,19.1564579962612,21.9357144210679,19.1603150644237,14.4592442770173,15.3222464862424,16.5520534941152,9.86489979138414,5.90440591918409,5.65195420228949,5.79966670432462,7.41131567717872,20.6887931087957,26.142346350056,17.0895205412489,15.8230894683032,12.3000351473733,8.14802725700543,9.20627639842594,10.8630601939274,10.9824565275233,7.18841032636773,8.55924179637558,5.92871578917665,8.33510297225469,6.63770430031075,5.30687873499704,10.7156850296631,22.9284608242287,19.2298672201591,20.0299201214722,18.7752198630802,13.9030193676707,9.28370199455454,12.2934198150413,13.8718926813448,10.85176979279,13.2347457985714,9.99566219766002,11.0518388394173,9.40218880779825,6.03165135757089,5.4390568381871,5.4094070032094,7.45029215022778,7.86697890940181,9.61135830056066,21.1476079535911,7.06918596172244,16.7219356290616,12.4940398174924,11.8482868753039,15.2940030689633,14.0363164671908,15.8522857241746,14.1683745586213,9.05993159525067,14.2303600060748,15.1021018718249,13.6262481799938,20.4775444217344,15.4742611385897,15.0122811905007,7.96470830039777,18.2085477116236,22.6742667723563,9.24164890803901,11.8120757152309,9.83792473420568,12.4045580720746,12.3601468022352,10.6949213515416,13.5895805912401,9.48767477174989,14.4389760547462,12.5962654128902,18.546292685225,16.4285528404098,15.0035924522115,11.5271151867478,11.2372355089304,9.3792941743209,12.7875278628132,11.2642419870581,22.4541995115649,8.60060752414351,11.8718102117866,15.1776561094151,17.9732516285904,12.5340961203293,16.5782308742512,7.86998258900597,10.0129663085675,12.9861869406368,16.3045625690946,21.2973706475168,13.7508973613424,14.4895881384287,13.0403558727718,17.8477351493548,19.7331547776358,17.6895966469662,7.63736494412091,24.6742074993286,18.7053909756701,15.768779759983,13.1725626489115,10.9181281873089,11.7331981354794,9.6704543198643,5.75863072364865,4.14767914533737,8.07741107013003,8.45539408026285,19.1381178936293,19.0277264025662,18.8617652693726,13.6909412886395,10.1373675294467,12.6745817737414,19.0098401872167,20.9718688851422,18.1188090619505,9.79302021276743,12.0084225838708,21.8943232513377,23.5208091907454,21.566856614314,20.4090433060929,16.0931897372825,15.8657993366359,15.0643317718069,16.1546319917036,15.012740911035,12.8049255123787,11.79240356951,11.2567854719185,9.58390597888865,9.29594572822367,29.0801598920025,30.9512805302691,24.0075001400632,11.204996453867,7.69498149349846,11.9048555773722,16.0776284309299,6.01886524842436,6.21227026878773,7.82552902062201,5.72895513439397,6.70227411140382,5.48066015816514,5.2877572817279,6.07520250208625,9.00642406448441,5.89085131679466,6.73088405277366,18.9930846079043,30.7249152518794,19.8050982674796,17.7467903459855,12.9960160829349,8.45680138870065,14.0015438515018,14.4224540067226,9.62757628775446,12.1294661646623,11.660047794951,9.80856975207596,9.45779225445812,14.4056592910956,12.8081095771018,12.3836359733599,12.9790445058238,16.7831021803423,11.1263193216893,14.2782952530365,14.4005086001874,8.69631450180754,10.7296285476294,11.3370204973216,11.7636725519163,10.7460552022429,12.073246209603,14.7319038405192,11.6791537907441,11.2228454331548,14.1175671567767,12.0175468498187,11.0492381655816,13.479505183179,11.9602098808308,12.4905288968973,12.3983752476066,11.8179079726564,8.7992632751668,10.1472052794977,7.41977073985349
|phase1_expression=9.92922852049723,1.04692622291808,0.454999239389536,1.51232105653415,0,10.0727563147134,11.9142446703718,25.1790480711074,91.6534581207351,118.904779371573,119.167705884951,127.874770869524,22.9408978107816,23.3412474458723,19.9865857089398,13.1608923803387,9.79386629379405,14.1957974411207,13.3001000597567,10.6097412949508,7.82398269389842,21.8440092641948,21.4183827093927,5.27974995218242,6.65286915094793,0,3.01533397311352,5.38678081714723,3.23039813075836,5.54466285471848,7.31710685162506,57.7877912848264,47.9750534315965,31.6963362030877,15.0202842270663,17.1221684719247,18.5794114198756,7.95210098400125,17.9707129240474,10.9939986234498,3.52938892818609,11.6117732442936,8.25367600152961,9.31636453019272,10.3404469843905,11.5634453861859,5.47673941043627,9.81113203712009,6.81027166476863,6.9994763666742,9.23910382727393,4.31257693094915,13.4226084846189,9.42970784614748,14.1159395639835,5.91696702882678,8.30946975822394,8.76642556871652,12.1389876515759,17.4567023159771,15.2119536841483,6.09920157724438,7.11435836888911,4.04954872776629,7.9109309005358,7.8152812644071,4.19440154725767,4.2264013585371,15.0349937847293,18.3608076131099,11.567872874326,9.99778445413313,7.73039893330647,17.8836566853833,15.814502718009,19.3035945188104,11.0115880999389,9.57655035638908,7.68032666281217,12.3973110466382,12.4423195299277,16.1483144872596,5.58365998002762,7.31591393041184,9.0150966188318,12.9636577608414,12.6710795911202,12.4887628702951,13.8578933799727,6.42358260907677,12.1743085254705,6.0229671388697,18.3592260101093,5.39703191637817,7.79731700937203,7.16843019355737,4.63466586434781,5.45377032249785,5.97507810586598,5.3000936176551,5.63373679106722,10.2661181931454,7.64415719119937,0,7.79367747640371,12.6679932737549,13.1436355703844,5.25245846707676,20.4560928081266,9.64873903921361,20.1242979048718,11.8741536541735,10.6083128737787,11.0027527603414,10.2302175208063,5.27799683584637,7.16865406429684,6.65157041831594,8.84610551949874,13.9119490954772,9.27534377533653,9.69750506270444,1.86391761218122,6.73395833126558,8.3778682725382,7.40825460104915,18.8109745474295,10.7982491578813,19.1876042880328,10.7849260371472,17.3850229071078,16.0837570704466,7.47444576826789,7.41574826257959,7.2725815595846,9.73447578406546,14.155671575194,8.21086006026614,8.59257378674494,11.995185785529,21.9903548606969,17.7024620413774,15.1252189036493,12.5084998803643,16.6689422920753,17.039124797885,13.3056448874815,36.7358786449402,27.1615671095381,20.9907748986279,23.0495972654773,18.6316372563439,16.1267404550847,14.626590993931,15.4336602305958,21.0976322827603,23.87524836865,19.5584409407184,23.3014069504386,19.2626968458017,12.6644072389792,13.6847166710371,14.678173606283,9.05115466038058,10.181629450567,7.67362017676346,6.9751084363901,8.52386999280337,9.54447129498187,6.07419617092652,8.59329381186071,8.77199924551994,7.02560368931362,6.1734952629771,9.04246778825747,13.9950272835827,1.65209391491899,8.19796756656987,23.8882840599462,24.8493238890669,19.2012517369919,13.3111126251406,10.229390016864,9.13083005340284,8.0669940462567,7.5761519173045,7.28872105520782,5.76973768919337,8.57841983324129,8.08937467788799,6.70027954611552,6.96994456390285,19.1564579962612,21.9357144210679,19.1603150644237,14.4592442770173,15.3222464862424,16.5520534941152,9.86489979138414,5.90440591918409,5.65195420228949,5.79966670432462,7.41131567717872,20.6887931087957,26.142346350056,17.0895205412489,15.8230894683032,12.3000351473733,8.14802725700543,9.20627639842594,10.8630601939274,10.9824565275233,7.18841032636773,8.55924179637558,5.92871578917665,8.33510297225469,6.63770430031075,5.30687873499704,10.7156850296631,22.9284608242287,19.2298672201591,20.0299201214722,18.7752198630802,13.9030193676707,9.28370199455454,12.2934198150413,13.8718926813448,10.85176979279,13.2347457985714,9.99566219766002,11.0518388394173,9.40218880779825,6.03165135757089,5.4390568381871,5.4094070032094,7.45029215022778,7.86697890940181,9.61135830056066,21.1476079535911,7.06918596172244,16.7219356290616,12.4940398174924,11.8482868753039,15.2940030689633,14.0363164671908,15.8522857241746,14.1683745586213,9.05993159525067,14.2303600060748,15.1021018718249,13.6262481799938,20.4775444217344,15.4742611385897,15.0122811905007,7.96470830039777,18.2085477116236,22.6742667723563,9.24164890803901,11.8120757152309,9.83792473420568,12.4045580720746,12.3601468022352,10.6949213515416,13.5895805912401,9.48767477174989,14.4389760547462,12.5962654128902,18.546292685225,16.4285528404098,15.0035924522115,11.5271151867478,11.2372355089304,9.3792941743209,12.7875278628132,11.2642419870581,22.4541995115649,8.60060752414351,11.8718102117866,15.1776561094151,17.9732516285904,12.5340961203293,16.5782308742512,7.86998258900597,10.0129663085675,12.9861869406368,16.3045625690946,21.2973706475168,13.7508973613424,14.4895881384287,13.0403558727718,17.8477351493548,19.7331547776358,17.6895966469662,7.63736494412091,24.6742074993286,18.7053909756701,15.768779759983,13.1725626489115,10.9181281873089,11.7331981354794,9.6704543198643,5.75863072364865,4.14767914533737,8.07741107013003,8.45539408026285,19.1381178936293,19.0277264025662,18.8617652693726,13.6909412886395,10.1373675294467,12.6745817737414,19.0098401872167,20.9718688851422,18.1188090619505,9.79302021276743,12.0084225838708,21.8943232513377,23.5208091907454,21.566856614314,20.4090433060929,16.0931897372825,15.8657993366359,15.0643317718069,16.1546319917036,15.012740911035,12.8049255123787,11.79240356951,11.2567854719185,9.58390597888865,9.29594572822367,29.0801598920025,30.9512805302691,24.0075001400632,11.204996453867,7.69498149349846,11.9048555773722,16.0776284309299,6.01886524842436,6.21227026878773,7.82552902062201,5.72895513439397,6.70227411140382,5.48066015816514,5.2877572817279,6.07520250208625,9.00642406448441,5.89085131679466,6.73088405277366,18.9930846079043,30.7249152518794,19.8050982674796,17.7467903459855,12.9960160829349,8.45680138870065,14.0015438515018,14.4224540067226,9.62757628775446,12.1294661646623,11.660047794951,9.80856975207596,9.45779225445812,14.4056592910956,12.8081095771018,12.3836359733599,12.9790445058238,16.7831021803423,11.1263193216893,14.2782952530365,14.4005086001874,8.69631450180754,10.7296285476294,11.3370204973216,11.7636725519163,10.7460552022429,12.073246209603,14.7319038405192,11.6791537907441,11.2228454331548,14.1175671567767,12.0175468498187,11.0492381655816,13.479505183179,11.9602098808308,12.4905288968973,12.3983752476066,11.8179079726564,8.7992632751668,10.1472052794977,7.41977073985349
|short_description=p1@Rrp1b
}}
}}

Revision as of 01:43, 18 April 2012

Short description:p1@Rrp1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rrp1b_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000151808, ENSMUST00000156164_5end
EntrezGene:Rrp1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rrp1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E791.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2118.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6119.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1127.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.34
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.30
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I357.79
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G647.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D913.86
Mouse Schwann, donor2.CNhs12573.11746-123F96.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H920.46
adrenal gland, adult.CNhs10508.49-24D79.65
adrenal gland, embryo E14.CNhs11038.406-44C520.12
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F511.00
adrenal gland, neonate N00.CNhs11191.1311-23C110.23
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F513.91
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.81
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.19
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F116.08
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.21
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G412.00
eyeball, embryo E12.CNhs11016.345-16C621.99
eyeball, embryo E14.CNhs10521.399-16E217.70
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D412.51
eyeball, neonate N00.CNhs11207.633-15C616.67
eyeball, neonate N01.CNhs11140.1532-43E717.04
eyeball, neonate N02.CNhs11205.1551-44G813.31
eyeball, neonate N16.CNhs11188.777-19A236.74
forelimb, embryo E11.CNhs10596.335-25E227.16
forelimb, embryo E12.CNhs10600.359-14H220.99
forelimb, embryo E13.CNhs10589.384-1E223.05
forelimb, embryo E14.CNhs10577.413-26A818.63
forelimb, embryo E15.CNhs11007.437-20E716.13
forelimb, embryo E17.CNhs10598.1517-43C414.63
forelimb, embryo E18.CNhs11008.1520-43B515.43
gonad, embryo E13.CNhs11044.1564-45I621.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.56
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.30
heart, embryo E11.CNhs10586.331-24E919.26
heart, embryo E12.CNhs11015.353-12F512.66
heart, embryo E13.CNhs11013.376-3I913.68
heart, embryo E14.CNhs10597.403-26D414.68
heart, embryo E15.CNhs11017.431-16C89.05
heart, embryo E16.CNhs11021.457-17C610.18
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I29.54
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G18.59
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D26.17
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G114.00
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I523.89
intestine, embryo E13.CNhs11010.381-16D524.85
intestine, embryo E15.CNhs10602.976-16D819.20
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D310.23
intestine, embryo E18.CNhs10526.1289-20F79.13
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E97.58
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I919.16
kidney, embryo E15.CNhs10997.434-16F821.94
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I214.46
kidney, embryo E18.CNhs11001.1288-20C715.32
kidney, neonate N00.CNhs11214.646-21G716.55
kidney, neonate N10.CNhs11206.758-6D59.86
kidney, neonate N20.CNhs11113.832-19I15.90
kidney, neonate N25.CNhs11122.1353-25F35.65
kidney, neonate N30.CNhs11203.1385-42H15.80
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F820.69
liver, embryo E13.CNhs10524.378-3H626.14
liver, embryo E14.CNhs10594.409-16E117.09
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F512.30
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F410.86
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A38.34
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B110.72
lung, embryo E12.CNhs10522.354-16G222.93
lung, embryo E14.CNhs10604.404-26F819.23
lung, embryo E15.CNhs11020.432-17C520.03
lung, embryo E16.CNhs10998.458-17B618.78
lung, embryo E17.CNhs10605.480-44A613.90
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C612.29
lung, neonate N06.CNhs11212.683-20E513.87
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E613.23
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C711.05
lung, neonate N30.CNhs11133.1394-42H29.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A39.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.85
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.23
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I713.63
ovary, embryo E18.CNhs11040.505-44H720.48
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G615.01
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F418.21
pancreas, embryo E15.CNhs11042.1556-45F222.67
pancreas, embryo E16.CNhs11003.460-26E59.24
pancreas, embryo E17.CNhs10599.1558-45G311.81
pancreas, embryo E18.CNhs10580.1535-43I79.84
pancreas, neonate N00.CNhs11105.645-26G912.40
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E618.55
pituitary gland, embryo E13.CNhs11009.370-44C716.43
pituitary gland, embryo E14.CNhs11037.398-44A515.00
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F611.24
pituitary gland, embryo E17.CNhs11039.1265-44F59.38
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I711.26
placenta, adult pregnant day17.CNhs10464.577-18G322.45
prostate, adult.CNhs10470.859-1F88.60
skin, adult.CNhs10492.30-1C311.87
skin, neonate N00.CNhs11124.650-25G415.18
skin, neonate N03.CNhs11215.662-22H317.97
skin, neonate N06.CNhs11097.693-20I512.53
skin, neonate N10.CNhs11108.762-6C416.58
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G212.99
spleen, embryo E16.CNhs11035.461-43C116.30
spleen, embryo E18.CNhs11011.1271-21F221.30
spleen, neonate N10.CNhs11116.752-24D113.75
spleen, neonate N20.CNhs11112.824-19H114.49
spleen, neonate N25.CNhs11099.1354-25G313.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.69
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E324.67
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D415.77
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C610.92
stomach, neonate N03.CNhs11193.1340-24B811.73
stomach, neonate N07.CNhs11210.718-18A99.67
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F519.14
testis, embryo E15.CNhs11034.443-27C519.03
testis, embryo E16.CNhs11033.470-26G518.86
testis, embryo E17.CNhs11029.486-18I513.69
testis, embryo E18.CNhs11027.503-18G510.14
testis, neonate N00.CNhs11189.1300-22B712.67
testis, neonate N07.CNhs11222.726-26I419.01
testis, neonate N10.CNhs11204.763-44D920.97
testis, neonate N20.CNhs11110.839-18H318.12
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I421.89
thymus, embryo E15.CNhs11005.430-45I223.52
thymus, embryo E16.CNhs11002.456-26C521.57
thymus, embryo E17.CNhs10581.478-18C120.41
thymus, embryo E18.CNhs10595.1273-19G416.09
thymus, neonate N02.CNhs11181.1541-43F815.87
thymus, neonate N03.CNhs11137.2104-43C715.06
thymus, neonate N06.CNhs11197.681-26C416.15
thymus, neonate N07.CNhs11211.713-19D315.01
thymus, neonate N10.CNhs11194.748-24E412.80
thymus, neonate N20.CNhs11186.820-7A211.79
thymus, neonate N25.CNhs11125.1362-25G711.26
thymus, neonate N30.CNhs11132.1393-42G29.58
tongue, adult.CNhs10499.32-1B49.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H329.08
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.01
urinary bladder, adult.CNhs10481.879-12E411.20
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D516.08
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I818.99
whole body, embryo E12.CNhs10587.857-27C930.72
whole body, embryo E13.CNhs10512.372-23H219.81
whole body, embryo E14.5.CNhs10578.420-27D217.75
whole body, embryo E14.CNhs10519.395-14B113.00
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.13
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.48
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C211.82
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:32173344..32173398,%2B&oldid=799691"