Personal tools

FFCP PHASE1:Mm9::chr17:24987027..24987063,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:24987027..24987063,-
|short_description=p2@Fahd1
|description=CAGE_peak_2_at_Fahd1_5end
|association_with_transcript=183bp_to_ENSMUST00000049642,NM_023480,uc008ayl.1_5end
|EntrezGene=68636
|EntrezGene=68636
|HGNC=
|HGNC=
|UniProt=Q3UQY4,Q8R0F8
|UniProt=Q3UQY4,Q8R0F8
|association_with_transcript=183bp_to_ENSMUST00000049642,NM_023480,uc008ayl.1_5end
|description=CAGE_peak_2_at_Fahd1_5end
|id=chr17:24987027..24987063,-
|ontology_enrichment_disease=
|phase1_expression=6.08565618998217,7.67745896806594,8.64498554840118,9.37639055051173,8.01433167914156,5.20425742926858,4.90586545250604,0.516493293766305,0.563154888606667,0.70219357896598,4.62288514208863,6.1424562426409,0.171200729931206,0.524522414513984,3.33109761815663,2.42970320867791,2.79824751251259,1.10411757875383,1.09691546884591,1.27316895539409,9.18467533631554,6.35462087685666,6.00759515019551,8.79958325363737,7.11168771308227,12.0588712464154,7.32295393470427,6.89507944594845,13.6816862008589,12.0974462284767,6.20845429834853,4.44521471421742,3.69038872550742,15.8481681015439,12.4206196493048,11.137721239019,9.39179038806898,0,0.7813353445238,0,1.17646297606203,0.683045484958446,0,7.93149953246137,4.76471576731718,8.81024410376071,1.56478268869608,2.18025156380447,1.5378032791413,0.972149495371417,2.37976916763116,1.43752564364972,0.335565212115473,0,0.672187598284928,1.54355661621568,2.86533439938757,3.6097046459421,1.41621522601718,3.1739458756322,0,1.35537812827653,3.55717918444456,0.899899717281399,3.9554654502679,2.1314403448383,0.898800331555214,2.30530983192933,0.829516898467821,2.43010688997043,1.05162480675691,2.28520787523043,2.20868540951614,0.734944795289724,0.479227355091182,0.919218786610021,3.30347642998166,7.2781782708557,6.91229399653096,1.71452174049252,2.37867873366265,0.52091337055676,8.09630697104005,10.1297269805702,7.18151764551008,5.59794312399969,5.69486723196412,2.42319279572891,3.7863096666592,1.73814588245607,4.63783181922684,10.3250865237766,5.439770669662,8.63525106620507,9.09686984426737,18.3691023709908,14.3253308534387,6.81721290312231,8.3131521472918,8.48014978824817,9.85903938436764,5.13305909657271,0,0,2.38140145112336,1.01343946190039,0.505524445014783,13.0169622879728,2.07150306917737,7.86743337043571,3.81667718885499,5.1759131313064,4.61230994512117,6.17962826265753,6.70255630673517,11.0586600370114,3.95511948374998,22.2683009656664,2.65383165584962,5.3383060482645,7.28777010919299,6.30337829075789,9.31958806090611,6.44117753425404,7.54008144528438,9.96282515313506,1.67741174308288,2.39961092397363,3.04968544975355,10.9347166765521,7.32000964509802,0.879580464790051,10.081810571152,6.64860189058859,10.8049783170971,7.13861557498134,5.19380755636613,6.22034853050465,7.83440551144392,5.89237196482127,6.76626303406059,6.43725892413724,5.40186389416048,5.57607825992146,4.35433594568498,5.12454881139399,4.96619140166563,7.50239775143145,2.15567992932842,3.02569728268511,3.51902248327898,3.94552318369635,3.33656699070717,4.179025998266,3.08673204611915,3.78165106955137,3.51106593656617,3.86021860672073,3.40996199274711,6.83515049367156,7.27030785941398,11.884096056427,11.6004920436753,14.5605531493079,13.7297730469767,20.4629871380359,23.3397859217669,18.7992201211143,17.6079039407424,21.6701052584406,25.4556061973987,26.1697977491345,26.126463719635,26.9754901708347,7.36014819974445,2.6755199218614,11.8950761874167,7.40461586657924,3.41261200856374,5.10920678092965,5.54130083685001,7.86565746031036,12.4531704553127,10.4624094361908,9.96511029243474,11.5289268306808,11.3100843960121,10.3457365461398,9.35827618171777,4.49409704327111,8.64552199498777,10.3553462092271,6.82804443431094,7.42615331963237,10.1436962105772,10.5898690479563,12.2190066915604,10.5905088034381,15.6826612068158,23.9128439726956,22.9218142648407,35.6617803734004,10.6722945751374,3.83743743147016,4.52085688760367,2.24862112384854,3.85434230638156,5.30589751455317,5.85639459097266,9.78166867332756,11.1873306474774,8.23684239564244,24.4405951096503,16.0020607497456,14.3537329632698,14.3969960429854,15.4281775628844,14.473305640901,3.51031061316549,5.87423376488503,4.88894929326078,4.75286240170527,4.92849521405854,4.85768146581266,4.52282917683426,3.51240566144038,5.67486518782288,1.99318220683897,3.02964060449226,4.42430949732493,4.31712454664739,2.16973587872267,6.03165135757089,0.54390568381871,9.34352118736169,8.27810238914197,9.47248480927973,9.84578167374507,7.86887737808042,18.6828486131236,3.78609863299508,3.90438744296638,3.87762115919038,4.77937595905104,4.45597348164788,3.11384183867716,4.45291771842384,4.38383786866968,5.13874111330481,6.74774764485795,4.5420827266646,5.34196811001766,5.21238269931443,3.79431282836832,5.30980553359851,3.39892890616974,3.02323556964751,3.96070667487386,4.42952839321159,3.68922177532713,6.20227903603731,4.36240475373007,4.27796854061666,4.74055136903724,3.16255825724996,3.09406629744561,10.5536277783674,4.68158844481407,4.39819524861365,3.64372959553707,6.0295679438373,5.35106452806212,5.43011767986999,1.8267896946876,1.64270195644597,1.90648863777438,5.07215315526412,5.7710188529518,2.58343082713449,2.41251699712623,3.34242563208782,4.43180429311665,7.57850175237612,8.15871328846243,2.39219233116994,4.12773735926445,3.1483069652851,3.95573759709851,1.91371918809435,1.60144721244566,2.20971958992012,1.81936888020755,1.24379976423981,7.63736494412091,4.9032079005076,5.48962561242491,4.75223499615926,8.15444354456428,6.76923947613151,6.47348862647139,7.85207829390691,11.5172614472973,10.2395828900516,8.07741107013003,18.0381740378941,5.38259565758324,5.79104716599842,4.66682852025714,6.58715099736429,5.91346439217724,4.22486059124714,5.7289929331338,5.45268591013696,5.79801889982414,11.5212002503146,2.21207784439725,3.24360344464263,2.46506297195585,2.07873316764472,1.07416017400489,1.58945083825012,1.80293174279953,1.03382669022204,1.51449674922221,0.990688486514998,0.907435666231565,0.584747284438515,0.769694733122636,0.935015217452552,10.8830584135301,1.99787358036658,3.58855426437903,0.839423081820392,8.113962949352,4.50437941082837,5.49454872801795,3.21552568618599,6.52043735245972,10.1655331671072,6.44455331110048,4.01026859407578,4.29632955859219,10.9613203163303,7.55393897389701,12.8254275044043,7.65546045481175,10.8754178156209,11.9084871702919,3.21740777510948,1.19707462020309,4.43907374960749,3.64660075602441,4.19226325255965,6.06683577885047,12.8903102124937,11.1258930909003,12.5158491740808,9.34979683526051,13.9413614939632,10.5630751176203,10.1132828067473,9.60377286073039,9.9363361293211,7.1444053692461,11.1248952907061,9.25964258225784,10.3021475200827,11.0399190100798,11.3146853287187,13.133209655791,11.6833733074187,12.7904846636449,10.540250606517,9.05376304440939,11.8903182367302,7.89209134313529,9.91370031074791,6.73370725989286,8.89762635931306,7.78185410766951,4.91077251803627,9.91595783590182,10.0311437710194,2.99772693525535,5.6143586026898,8.37997110788363,9.18183993930448,7.27951683094401,14.6076736440866
|phase1_expression=6.08565618998217,7.67745896806594,8.64498554840118,9.37639055051173,8.01433167914156,5.20425742926858,4.90586545250604,0.516493293766305,0.563154888606667,0.70219357896598,4.62288514208863,6.1424562426409,0.171200729931206,0.524522414513984,3.33109761815663,2.42970320867791,2.79824751251259,1.10411757875383,1.09691546884591,1.27316895539409,9.18467533631554,6.35462087685666,6.00759515019551,8.79958325363737,7.11168771308227,12.0588712464154,7.32295393470427,6.89507944594845,13.6816862008589,12.0974462284767,6.20845429834853,4.44521471421742,3.69038872550742,15.8481681015439,12.4206196493048,11.137721239019,9.39179038806898,0,0.7813353445238,0,1.17646297606203,0.683045484958446,0,7.93149953246137,4.76471576731718,8.81024410376071,1.56478268869608,2.18025156380447,1.5378032791413,0.972149495371417,2.37976916763116,1.43752564364972,0.335565212115473,0,0.672187598284928,1.54355661621568,2.86533439938757,3.6097046459421,1.41621522601718,3.1739458756322,0,1.35537812827653,3.55717918444456,0.899899717281399,3.9554654502679,2.1314403448383,0.898800331555214,2.30530983192933,0.829516898467821,2.43010688997043,1.05162480675691,2.28520787523043,2.20868540951614,0.734944795289724,0.479227355091182,0.919218786610021,3.30347642998166,7.2781782708557,6.91229399653096,1.71452174049252,2.37867873366265,0.52091337055676,8.09630697104005,10.1297269805702,7.18151764551008,5.59794312399969,5.69486723196412,2.42319279572891,3.7863096666592,1.73814588245607,4.63783181922684,10.3250865237766,5.439770669662,8.63525106620507,9.09686984426737,18.3691023709908,14.3253308534387,6.81721290312231,8.3131521472918,8.48014978824817,9.85903938436764,5.13305909657271,0,0,2.38140145112336,1.01343946190039,0.505524445014783,13.0169622879728,2.07150306917737,7.86743337043571,3.81667718885499,5.1759131313064,4.61230994512117,6.17962826265753,6.70255630673517,11.0586600370114,3.95511948374998,22.2683009656664,2.65383165584962,5.3383060482645,7.28777010919299,6.30337829075789,9.31958806090611,6.44117753425404,7.54008144528438,9.96282515313506,1.67741174308288,2.39961092397363,3.04968544975355,10.9347166765521,7.32000964509802,0.879580464790051,10.081810571152,6.64860189058859,10.8049783170971,7.13861557498134,5.19380755636613,6.22034853050465,7.83440551144392,5.89237196482127,6.76626303406059,6.43725892413724,5.40186389416048,5.57607825992146,4.35433594568498,5.12454881139399,4.96619140166563,7.50239775143145,2.15567992932842,3.02569728268511,3.51902248327898,3.94552318369635,3.33656699070717,4.179025998266,3.08673204611915,3.78165106955137,3.51106593656617,3.86021860672073,3.40996199274711,6.83515049367156,7.27030785941398,11.884096056427,11.6004920436753,14.5605531493079,13.7297730469767,20.4629871380359,23.3397859217669,18.7992201211143,17.6079039407424,21.6701052584406,25.4556061973987,26.1697977491345,26.126463719635,26.9754901708347,7.36014819974445,2.6755199218614,11.8950761874167,7.40461586657924,3.41261200856374,5.10920678092965,5.54130083685001,7.86565746031036,12.4531704553127,10.4624094361908,9.96511029243474,11.5289268306808,11.3100843960121,10.3457365461398,9.35827618171777,4.49409704327111,8.64552199498777,10.3553462092271,6.82804443431094,7.42615331963237,10.1436962105772,10.5898690479563,12.2190066915604,10.5905088034381,15.6826612068158,23.9128439726956,22.9218142648407,35.6617803734004,10.6722945751374,3.83743743147016,4.52085688760367,2.24862112384854,3.85434230638156,5.30589751455317,5.85639459097266,9.78166867332756,11.1873306474774,8.23684239564244,24.4405951096503,16.0020607497456,14.3537329632698,14.3969960429854,15.4281775628844,14.473305640901,3.51031061316549,5.87423376488503,4.88894929326078,4.75286240170527,4.92849521405854,4.85768146581266,4.52282917683426,3.51240566144038,5.67486518782288,1.99318220683897,3.02964060449226,4.42430949732493,4.31712454664739,2.16973587872267,6.03165135757089,0.54390568381871,9.34352118736169,8.27810238914197,9.47248480927973,9.84578167374507,7.86887737808042,18.6828486131236,3.78609863299508,3.90438744296638,3.87762115919038,4.77937595905104,4.45597348164788,3.11384183867716,4.45291771842384,4.38383786866968,5.13874111330481,6.74774764485795,4.5420827266646,5.34196811001766,5.21238269931443,3.79431282836832,5.30980553359851,3.39892890616974,3.02323556964751,3.96070667487386,4.42952839321159,3.68922177532713,6.20227903603731,4.36240475373007,4.27796854061666,4.74055136903724,3.16255825724996,3.09406629744561,10.5536277783674,4.68158844481407,4.39819524861365,3.64372959553707,6.0295679438373,5.35106452806212,5.43011767986999,1.8267896946876,1.64270195644597,1.90648863777438,5.07215315526412,5.7710188529518,2.58343082713449,2.41251699712623,3.34242563208782,4.43180429311665,7.57850175237612,8.15871328846243,2.39219233116994,4.12773735926445,3.1483069652851,3.95573759709851,1.91371918809435,1.60144721244566,2.20971958992012,1.81936888020755,1.24379976423981,7.63736494412091,4.9032079005076,5.48962561242491,4.75223499615926,8.15444354456428,6.76923947613151,6.47348862647139,7.85207829390691,11.5172614472973,10.2395828900516,8.07741107013003,18.0381740378941,5.38259565758324,5.79104716599842,4.66682852025714,6.58715099736429,5.91346439217724,4.22486059124714,5.7289929331338,5.45268591013696,5.79801889982414,11.5212002503146,2.21207784439725,3.24360344464263,2.46506297195585,2.07873316764472,1.07416017400489,1.58945083825012,1.80293174279953,1.03382669022204,1.51449674922221,0.990688486514998,0.907435666231565,0.584747284438515,0.769694733122636,0.935015217452552,10.8830584135301,1.99787358036658,3.58855426437903,0.839423081820392,8.113962949352,4.50437941082837,5.49454872801795,3.21552568618599,6.52043735245972,10.1655331671072,6.44455331110048,4.01026859407578,4.29632955859219,10.9613203163303,7.55393897389701,12.8254275044043,7.65546045481175,10.8754178156209,11.9084871702919,3.21740777510948,1.19707462020309,4.43907374960749,3.64660075602441,4.19226325255965,6.06683577885047,12.8903102124937,11.1258930909003,12.5158491740808,9.34979683526051,13.9413614939632,10.5630751176203,10.1132828067473,9.60377286073039,9.9363361293211,7.1444053692461,11.1248952907061,9.25964258225784,10.3021475200827,11.0399190100798,11.3146853287187,13.133209655791,11.6833733074187,12.7904846636449,10.540250606517,9.05376304440939,11.8903182367302,7.89209134313529,9.91370031074791,6.73370725989286,8.89762635931306,7.78185410766951,4.91077251803627,9.91595783590182,10.0311437710194,2.99772693525535,5.6143586026898,8.37997110788363,9.18183993930448,7.27951683094401,14.6076736440866
|short_description=p2@Fahd1
}}
}}

Revision as of 01:24, 18 April 2012

Short description:p2@Fahd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fahd1_5end
Coexpression cluster:NA
Association with transcript: 183bp_to_ENSMUST00000049642, NM_023480, uc008ayl.1_5end
EntrezGene:Fahd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fahd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B913.68
Ileum epithelium, pool2.CNhs13232.10253-104C112.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D93.79
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.37
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.02
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C16.70
adrenal gland, neonate N25.CNhs11223.1377-27I311.06
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H122.27
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H79.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D510.08
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I911.88
heart, embryo E14.CNhs10597.403-26D411.60
heart, embryo E15.CNhs11017.431-16C814.56
heart, embryo E16.CNhs11021.457-17C613.73
heart, embryo E17.CNhs11025.479-18E520.46
heart, embryo E18.CNhs11030.1283-20G323.34
heart, neonate N00.CNhs11213.639-21E318.80
heart, neonate N03.CNhs11221.1349-25I217.61
heart, neonate N10.CNhs11118.749-24G121.67
heart, neonate N16.CNhs11209.782-15G125.46
heart, neonate N20.CNhs11127.821-26I626.17
heart, neonate N25.CNhs11196.1351-25D326.13
heart, neonate N30.CNhs11202.1390-42D226.98
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I311.90
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D312.45
intestine, embryo E18.CNhs10526.1289-20F710.46
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F210.35
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G110.36
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F87.43
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I210.59
kidney, embryo E18.CNhs11001.1288-20C712.22
kidney, neonate N00.CNhs11214.646-21G710.59
kidney, neonate N10.CNhs11206.758-6D515.68
kidney, neonate N20.CNhs11113.832-19I123.91
kidney, neonate N25.CNhs11122.1353-25F322.92
kidney, neonate N30.CNhs11203.1385-42H135.66
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F411.19
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A314.40
liver, neonate N25.CNhs11198.1368-26H115.43
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A39.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.68
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A97.85
stomach, neonate N25.CNhs11104.1355-25E411.52
stomach, neonate N30.CNhs11134.1386-42I110.24
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G55.91
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E211.52
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.92
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C69.18
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B414.61





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:24987027..24987063,-&oldid=797208"