Personal tools

FFCP PHASE1:Mm9::chr12:60112983..60113021,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_2_at_Sec23a_5end
|description=CAGE_peak_2_at_Sec23a_5end
|id=chr12:60112983..60113021,-
|id=chr12:60112983..60113021,-
|ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000540!2.74e-09!33;CL:0000047!2.74e-09!33;CL:0000031!2.74e-09!33;CL:0000404!2.74e-09!33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=6.40595388419176,3.48975407639361,5.45999087267443,1.81478526784098,3.00537437967808,1.51091344720701,2.33612640595526,1.80772652818207,1.12630977721333,0,1.71217968225505,1.27635454392538,1.54080656938085,2.09808965805594,2.99798785634096,4.25198061518635,2.09868563438444,3.94327706697797,3.42786084014347,2.12194825899015,24.9176840142634,0.695036658406197,1.04479915655574,3.83981814704176,1.83527424853736,5.7423196411502,2.15380998079537,1.72376986148711,3.6104449696711,2.01624103807945,1.10865255327652,0.635030673459631,1.23012957516914,0,0.577703239502549,0.997407872150954,0.408338712524738,2.92972141515835,0.7813353445238,2.61761871986899,1.17646297606203,4.78131839470912,2.42755176515577,1.88845226963366,2.12891555560981,0.917733760808408,1.56478268869608,3.05235218932625,2.19686182734472,2.52758868796568,2.93971485413261,1.43752564364972,1.51004345451963,1.45072428402269,2.01656279485478,2.57259436035947,2.0057340795713,3.6097046459421,40.26097571106,37.0293685490423,51.3403436840005,2.37191172448392,0.889294796111139,0,0,0.7104801149461,2.39680088414724,1.15265491596466,32.4548486525535,41.5818290061607,41.0133674635195,35.1350710816678,32.4676755198872,48.8738288867667,34.4085240955469,67.1029714225315,82.5869107495415,46.222816386838,50.9973690410728,45.5007692669169,39.3396867490361,50.007683573449,45.2276458382237,54.587973173073,45.2282813419358,45.6674307484185,43.8504776861237,42.4990736481685,2.95332153999418,3.77857800533928,2.02905142091174,2.58127163094416,0.679971333707751,2.69851595818909,2.59910566979068,1.79210754838934,8.14577636764161,1.70430322578058,2.07828803682295,0.70667914902068,3.23939865486365,3.84979432242953,2.54805239706646,0,1.5154372870785,0.760079596425296,1.51657333504435,5.82337786567206,2.33044095282455,2.07818994690755,5.72501578328248,3.34912026143355,3.68984795609694,3.46662073271032,4.8211369925639,2.01066546127481,2.47194967734374,2.31358971071859,4.42305275974937,9.05894359705491,6.18356251689102,3.39412677194655,0,18.737971008739,20.1068838540917,2.55457055208591,1.91704199209472,0.599902730993408,1.65191295194984,49.7304922824011,43.9200578705881,55.1622605775475,57.188201343259,47.5630750634415,46.1289458922223,44.7785886067011,7.94347038032467,5.10068579501381,3.28539585963777,7.57590681191306,10.0192741081282,10.8053989083732,14.4049703844279,11.6042709733501,13.6072998302656,17.935920839879,15.4607845523553,19.4027528054262,8.191583731448,9.64441008855878,11.9646764431485,8.98702502953057,6.11703948296315,4.87553033131033,4.7329891373827,7.76233640592123,3.51106593656617,2.31613116403244,3.40996199274711,6.21377317606506,7.50483391939508,6.30217215113552,5.68187365404505,8.65762619688577,4.31947916084659,4.88321283975857,4.82892122519315,7.00592054203017,6.08871444679878,3.94001913789829,6.24229833503089,5.26319954731196,5.48875288227627,5.2340503316545,37.4316108444146,47.6448355316087,2.31293148088659,2.64450566663544,8.31824177087412,8.59275685883622,3.09281907173024,4.03367049246685,4.00280478920767,5.51654315726422,2.84717436926707,4.6115707322723,1.75934646160189,1.1937388322469,2.9244613067868,3.59527763461689,2.16138049874694,2.78797782556114,6.63837653335786,6.740662243974,5.63538678365402,4.48032921259691,4.26695471768777,5.26018649177389,3.85742876457969,4.13308414342886,2.19798218977925,3.33172342588861,0.889357881261447,4.50481785433454,3.53806191203765,4.27238013531222,3.04290182082754,5.06472035480075,3.05551022137704,6.61701116136864,2.10775794807546,2.19649130550465,0,1.11642284300551,3.12037673114561,2.27320990152401,1.97337154874103,2.41221760681684,2.40179147216586,6.63219941196697,6.35563408123901,4.07388205860452,3.28566347603903,4.18765643604539,3.33261097240419,3.31727201358258,5.51723004371669,3.76489972402917,6.37819074629948,2.29408640602033,2.76295970985433,2.31438493730419,0,2.17562273527484,1.47529281905711,2.48343071674259,50.2523346661789,46.0641928307358,2.62295912602681,19.1877904675323,2.52406575533005,2.34263246577983,6.24727853425117,4.54040716109849,2.67358408898873,4.52922449262132,4.04810701674894,5.26060544240361,3.16230222357219,35.9879874392424,4.11626247103979,9.79360820169904,9.44744364250741,4.61916344323099,0,2.91336763385978,2.72091201268276,2.26326095707078,1.18120757152309,1.22974059177571,1.55056975900933,2.54473610634254,2.85197902707777,1.26414703174326,1.05418608574999,1.03135543248187,9.19186935535228,7.0223826672211,5.43306471887569,6.64444808597936,8.6896714484714,7.31312152168489,10.0374902567294,5.78483403317739,3.28540391289194,4.87213762986786,2.42581237860458,3.62749756471256,7.58882805470756,2.5934557719107,2.50681922406587,1.64140899745061,2.33184669303881,50.8065327508797,2.73393409276564,3.30218988741156,4.44466865687308,6.2161590811548,4.51090951479383,3.20289442489132,2.03974115992626,1.11961161858926,2.07299960706636,0.954670618015114,8.06656783631895,4.87966721104437,5.07625101862466,3.3454127362315,2.83871332870031,4.85511646985355,3.2234847732881,2.87931536182433,2.07383957266869,0.621339313086926,149.37862875131,6.87776111802302,5.79104716599842,8.75030347548214,5.03723311563151,7.43406952159424,8.68443565978579,5.4685841634459,14.5754488751738,66.6772173479777,68.8391714956298,7.90027801570446,4.45995473638361,3.3894615864393,4.28738715826724,4.47566739168704,6.15912199821921,4.32703618271888,5.75989155980851,5.85605409699256,6.62999217898499,7.4611377001262,7.79663045918019,4.61816839873581,5.37633750035217,4.76133805591944,4.21773311410723,2.87084341150322,3.35769232728157,2.89784391048286,2.62755465631655,3.47988086107804,1.71494703263253,2.50786052017682,55.9104324190896,64.4455331110048,59.0082378842579,68.0538602081003,50.0110239432569,43.8128460486026,51.3017100176172,39.6282658837314,50.2988073972467,45.0451471224083,12.1431196673487,13.9658705690361,13.4879548545766,12.8846560046196,15.7209871970987,13.236732608401,8.22312892865976,10.0957178047058,12.194929964489,10.8659801058433,14.4483200937437,11.5062068245506,10.3942073291569,9.73182316554013,10.6255617567885,12.3836359733599,10.6613579869267,9.64546102318525,9.06588981767275,10.3039244094078,8.9146005620208,9.22874192028555,10.4911923576821,10.61028841416,12.6106569756543,11.3383574574847,13.7195979654579,13.6796249947678,11.4075455630524,13.4674145197857,10.0839765405548,10.7369885789364,17.5969348562966,11.6202630889474,9.25951732709479,22.7327625923531,10.5269223800434,12.4625211348013,10.7121465958552,8.6030653456611,9.50658126043728
|phase1_expression=6.40595388419176,3.48975407639361,5.45999087267443,1.81478526784098,3.00537437967808,1.51091344720701,2.33612640595526,1.80772652818207,1.12630977721333,0,1.71217968225505,1.27635454392538,1.54080656938085,2.09808965805594,2.99798785634096,4.25198061518635,2.09868563438444,3.94327706697797,3.42786084014347,2.12194825899015,24.9176840142634,0.695036658406197,1.04479915655574,3.83981814704176,1.83527424853736,5.7423196411502,2.15380998079537,1.72376986148711,3.6104449696711,2.01624103807945,1.10865255327652,0.635030673459631,1.23012957516914,0,0.577703239502549,0.997407872150954,0.408338712524738,2.92972141515835,0.7813353445238,2.61761871986899,1.17646297606203,4.78131839470912,2.42755176515577,1.88845226963366,2.12891555560981,0.917733760808408,1.56478268869608,3.05235218932625,2.19686182734472,2.52758868796568,2.93971485413261,1.43752564364972,1.51004345451963,1.45072428402269,2.01656279485478,2.57259436035947,2.0057340795713,3.6097046459421,40.26097571106,37.0293685490423,51.3403436840005,2.37191172448392,0.889294796111139,0,0,0.7104801149461,2.39680088414724,1.15265491596466,32.4548486525535,41.5818290061607,41.0133674635195,35.1350710816678,32.4676755198872,48.8738288867667,34.4085240955469,67.1029714225315,82.5869107495415,46.222816386838,50.9973690410728,45.5007692669169,39.3396867490361,50.007683573449,45.2276458382237,54.587973173073,45.2282813419358,45.6674307484185,43.8504776861237,42.4990736481685,2.95332153999418,3.77857800533928,2.02905142091174,2.58127163094416,0.679971333707751,2.69851595818909,2.59910566979068,1.79210754838934,8.14577636764161,1.70430322578058,2.07828803682295,0.70667914902068,3.23939865486365,3.84979432242953,2.54805239706646,0,1.5154372870785,0.760079596425296,1.51657333504435,5.82337786567206,2.33044095282455,2.07818994690755,5.72501578328248,3.34912026143355,3.68984795609694,3.46662073271032,4.8211369925639,2.01066546127481,2.47194967734374,2.31358971071859,4.42305275974937,9.05894359705491,6.18356251689102,3.39412677194655,0,18.737971008739,20.1068838540917,2.55457055208591,1.91704199209472,0.599902730993408,1.65191295194984,49.7304922824011,43.9200578705881,55.1622605775475,57.188201343259,47.5630750634415,46.1289458922223,44.7785886067011,7.94347038032467,5.10068579501381,3.28539585963777,7.57590681191306,10.0192741081282,10.8053989083732,14.4049703844279,11.6042709733501,13.6072998302656,17.935920839879,15.4607845523553,19.4027528054262,8.191583731448,9.64441008855878,11.9646764431485,8.98702502953057,6.11703948296315,4.87553033131033,4.7329891373827,7.76233640592123,3.51106593656617,2.31613116403244,3.40996199274711,6.21377317606506,7.50483391939508,6.30217215113552,5.68187365404505,8.65762619688577,4.31947916084659,4.88321283975857,4.82892122519315,7.00592054203017,6.08871444679878,3.94001913789829,6.24229833503089,5.26319954731196,5.48875288227627,5.2340503316545,37.4316108444146,47.6448355316087,2.31293148088659,2.64450566663544,8.31824177087412,8.59275685883622,3.09281907173024,4.03367049246685,4.00280478920767,5.51654315726422,2.84717436926707,4.6115707322723,1.75934646160189,1.1937388322469,2.9244613067868,3.59527763461689,2.16138049874694,2.78797782556114,6.63837653335786,6.740662243974,5.63538678365402,4.48032921259691,4.26695471768777,5.26018649177389,3.85742876457969,4.13308414342886,2.19798218977925,3.33172342588861,0.889357881261447,4.50481785433454,3.53806191203765,4.27238013531222,3.04290182082754,5.06472035480075,3.05551022137704,6.61701116136864,2.10775794807546,2.19649130550465,0,1.11642284300551,3.12037673114561,2.27320990152401,1.97337154874103,2.41221760681684,2.40179147216586,6.63219941196697,6.35563408123901,4.07388205860452,3.28566347603903,4.18765643604539,3.33261097240419,3.31727201358258,5.51723004371669,3.76489972402917,6.37819074629948,2.29408640602033,2.76295970985433,2.31438493730419,0,2.17562273527484,1.47529281905711,2.48343071674259,50.2523346661789,46.0641928307358,2.62295912602681,19.1877904675323,2.52406575533005,2.34263246577983,6.24727853425117,4.54040716109849,2.67358408898873,4.52922449262132,4.04810701674894,5.26060544240361,3.16230222357219,35.9879874392424,4.11626247103979,9.79360820169904,9.44744364250741,4.61916344323099,0,2.91336763385978,2.72091201268276,2.26326095707078,1.18120757152309,1.22974059177571,1.55056975900933,2.54473610634254,2.85197902707777,1.26414703174326,1.05418608574999,1.03135543248187,9.19186935535228,7.0223826672211,5.43306471887569,6.64444808597936,8.6896714484714,7.31312152168489,10.0374902567294,5.78483403317739,3.28540391289194,4.87213762986786,2.42581237860458,3.62749756471256,7.58882805470756,2.5934557719107,2.50681922406587,1.64140899745061,2.33184669303881,50.8065327508797,2.73393409276564,3.30218988741156,4.44466865687308,6.2161590811548,4.51090951479383,3.20289442489132,2.03974115992626,1.11961161858926,2.07299960706636,0.954670618015114,8.06656783631895,4.87966721104437,5.07625101862466,3.3454127362315,2.83871332870031,4.85511646985355,3.2234847732881,2.87931536182433,2.07383957266869,0.621339313086926,149.37862875131,6.87776111802302,5.79104716599842,8.75030347548214,5.03723311563151,7.43406952159424,8.68443565978579,5.4685841634459,14.5754488751738,66.6772173479777,68.8391714956298,7.90027801570446,4.45995473638361,3.3894615864393,4.28738715826724,4.47566739168704,6.15912199821921,4.32703618271888,5.75989155980851,5.85605409699256,6.62999217898499,7.4611377001262,7.79663045918019,4.61816839873581,5.37633750035217,4.76133805591944,4.21773311410723,2.87084341150322,3.35769232728157,2.89784391048286,2.62755465631655,3.47988086107804,1.71494703263253,2.50786052017682,55.9104324190896,64.4455331110048,59.0082378842579,68.0538602081003,50.0110239432569,43.8128460486026,51.3017100176172,39.6282658837314,50.2988073972467,45.0451471224083,12.1431196673487,13.9658705690361,13.4879548545766,12.8846560046196,15.7209871970987,13.236732608401,8.22312892865976,10.0957178047058,12.194929964489,10.8659801058433,14.4483200937437,11.5062068245506,10.3942073291569,9.73182316554013,10.6255617567885,12.3836359733599,10.6613579869267,9.64546102318525,9.06588981767275,10.3039244094078,8.9146005620208,9.22874192028555,10.4911923576821,10.61028841416,12.6106569756543,11.3383574574847,13.7195979654579,13.6796249947678,11.4075455630524,13.4674145197857,10.0839765405548,10.7369885789364,17.5969348562966,11.6202630889474,9.25951732709479,22.7327625923531,10.5269223800434,12.4625211348013,10.7121465958552,8.6030653456611,9.50658126043728
|short_description=p2@Sec23a
|short_description=p2@Sec23a
}}
}}

Revision as of 01:10, 18 April 2012

Short description:p2@Sec23a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sec23a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000021375, ENSMUST00000134223, NM_009147, uc007npw.1_5end
EntrezGene:Sec23a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sec23a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C340.26
Mouse Granule cells, donor2.CNhs12357.11731-123E337.03
Mouse Granule cells, donor3.CNhs12108.11636-122C751.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F541.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.01
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D248.87
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D667.10
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D382.59
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F439.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D850.01
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E445.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E554.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D645.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F643.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E142.50
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.82
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A449.73
corpus striatum, adult.CNhs10487.19-21D843.92
corpus striatum, neonate N00.CNhs11226.630-43F155.16
cortex, adult.CNhs10473.12-14D557.19
cortex, neonate N30.CNhs11107.1392-42F247.56
diencephalon, adult.CNhs10482.20-12F246.13
diencephalon, neonate N30.CNhs11201.1388-42B244.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C914.40
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C613.61
eyeball, neonate N01.CNhs11140.1532-43E717.94
eyeball, neonate N02.CNhs11205.1551-44G815.46
eyeball, neonate N16.CNhs11188.777-19A219.40
forelimb, embryo E11.CNhs10596.335-25E28.19
forelimb, embryo E12.CNhs10600.359-14H29.64
forelimb, embryo E13.CNhs10589.384-1E211.96
forelimb, embryo E14.CNhs10577.413-26A88.99
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I96.30
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E37.01
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G16.24
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E837.43
hippocampus, neonate N00.CNhs11228.627-43G147.64
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G75.26
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E66.38
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C250.25
medulla oblongata, neonate N30.CNhs11200.1396-42A346.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I935.99
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H79.79
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B98.69
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C950.81
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D16.22
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B84.86
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G5149.38
testis, embryo E13.CNhs11031.389-23F56.88
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B78.68
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D914.58
testis, neonate N20.CNhs11110.839-18H366.68
testis, neonate N30.CNhs11130.1391-42E268.84
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C75.76
thymus, neonate N06.CNhs11197.681-26C45.86
thymus, neonate N07.CNhs11211.713-19D36.63
thymus, neonate N10.CNhs11194.748-24E47.46
thymus, neonate N20.CNhs11186.820-7A27.80
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A264.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A359.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D768.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.01
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A850.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.05
whole body, embryo E11.CNhs11014.324-5I812.14
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H213.49
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F213.24
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I522.73
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C212.46
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B49.51





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:60112983..60113021,-&oldid=795319"