Personal tools

FFCP PHASE1:Mm9::chr13:94827712..94827793,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:94827712..94827793,+
|short_description=p1@Lhfpl2
|description=CAGE_peak_1_at_Lhfpl2_5end
|association_with_transcript=0bp_to_ENSMUST00000054274,ENSMUST00000144838,NM_172589,uc007rlp.1_5end
|EntrezGene=218454
|EntrezGene=218454
|HGNC=
|HGNC=
|UniProt=Q8BGA2
|UniProt=Q8BGA2
|association_with_transcript=0bp_to_ENSMUST00000054274,ENSMUST00000144838,NM_172589,uc007rlp.1_5end
|description=CAGE_peak_1_at_Lhfpl2_5end
|id=chr13:94827712..94827793,+
|ontology_enrichment_disease=
|phase1_expression=37.314681375417,0,0,0,0,0.16787927191189,0.233612640595526,0,0.281577444303333,0.468129052643987,0.34243593645101,0,0,0,0,0,0,0,0,0,2.55129870453209,2.18440092641948,3.39559725880616,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,7.11503772252743,3.1253413780952,3.66466620781659,8.2352408324342,10.2456822743767,8.73918635456076,9.06457089424156,7.80602370390262,4.77221555620372,11.7358701652206,1.96222640742402,2.41654801007919,2.3331587888914,11.0589273084036,1.43752564364972,0,0,0,9.51859913333004,8.88253663810146,0.515672092277442,3.84401275633236,5.81890077199236,2.53532561402472,24.0579617769084,14.2287167377782,3.5995988691256,4.94433181283487,4.2628806896766,26.664409836138,17.28982373947,7.98410014775278,4.59020190327748,5.25812403378455,5.14171771926846,9.718215801871,2.57230678351403,2.30029130443767,4.5960939330501,4.40463523997555,3.19218345212969,1.38245879930619,4.87979264601717,3.65950574409639,5.73004707612436,2.51264699101243,5.6276261003168,3.51435969886663,10.606629077052,11.9592211871246,7.08317894136142,17.4927506599655,21.0844652697932,61.4512716047557,10.3250865237766,0,0.539703191637817,0.649776417447669,1.34408066129201,1.68533304158102,10.5666799998396,8.05336614268893,8.83348936275851,7.18301440861071,17.9657068380045,22.9324715735981,21.3320010945999,0,0.506719730950197,0.505524445014783,0.22836775943812,1.8125651855302,8.01587550950054,41.1160224435742,18.8768596553528,15.2206228188999,11.6056433225519,16.344830291863,8.41966161908826,2.22475470960936,2.16899035379867,0.884610551949874,28.6327324406914,5.30019644304944,9.21262980956922,0,1.17112318804619,1.46612694769419,0.766371165625774,0.11981512450592,0,0.508280908292259,1.9472783122627,0.915001205637253,3.01570445070875,2.60736480288415,3.3243009452943,1.24672826735736,3.40706652442291,40.9394242678271,6.22034853050465,2.77995034277042,3.78795340595653,27.7156543510559,22.5304062344803,31.1507484563254,32.4015358346787,24.697249191932,20.8825364064305,19.3962569838639,13.9699820199068,14.4430555265004,21.5580931391314,18.2989169130507,26.9610750885917,29.1949611686878,49.1035554796255,50.2108412835382,53.9382863078117,0,0.257347907114715,0,13.6703009873431,14.3060896588469,14.5850269783422,17.2823656977203,15.5443743080449,16.9693824176116,13.0219009060228,12.0723030629829,11.3262382096154,19.0889425899637,20.1925980817287,9.07970666913584,7.30999937126662,7.46470391989572,2.01309628140558,5.67782861123144,8.02655976558419,0.330418782983798,1.32225283331772,13.650448034255,10.6828869055802,14.5620231293965,8.47070803418039,6.89371935919098,8.17970192284004,1.89811624617805,5.27036655116835,7.28872105520782,5.57078121715222,6.82374304916921,3.59527763461689,3.02593269824572,1.39398891278057,35.2782295772732,37.2450151107716,32.6852433451933,32.9915151109409,32.7779703313288,26.4412040986501,34.0212569728504,4.13308414342886,8.79192875911699,3.33172342588861,2.37162101669719,5.5058884886311,6.4864468387357,2.24862112384854,2.23146133527353,2.41177159752417,2.80088436959562,1.15078454980324,1.94562272130042,2.74561413188081,8.62609239164127,6.69853705803306,6.86482880852033,2.77836765741823,4.30553792452589,1.4473305640901,2.58654466233247,28.4237117655727,27.2151510658183,32.4213113830609,29.5709712843513,21.775813467436,18.091316707337,15.8058254764817,35.7831777121054,36.0987444127503,48.3147949032186,5.73521601505083,6.38934432903814,5.35201516751593,0,1.63171705145613,6.39293554924747,8.27810238914197,3.85321415970701,3.7507739709505,10.0000316679772,6.05930225290495,9.78075480190396,8.98009111882268,8.40151251157916,7.64700153448166,10.9171350300373,11.6061377623421,8.09621403349789,7.89090816360542,12.2539211163422,4.81981974632711,33.2139799387349,43.6260728984775,41.861948553869,11.8778488540226,1.32745138339963,10.6823479908192,11.7906187216253,7.73280826999182,13.5838870725155,16.908933136916,17.0562673491026,20.3578888507403,21.3898427030833,6.32073515871632,6.32511651449993,7.21948802737308,4.08527526904546,23.7680644121329,24.4487912349406,29.5785108343597,32.6306029901783,38.8844022372514,33.2389021616284,15.5277124048446,2.3467170806371,4.66030555900404,8.82113592219848,6.43056386471772,30.1938477921343,42.4602991494217,20.6514155125426,11.3257220824092,4.66369338607761,4.26478194624172,0.683483523191411,7.84270098260245,9.07453184111587,5.08594833912666,1.23024804948923,1.60144721244566,0.169978429993855,0.139951452323658,0.967399816630967,0.954670618015114,7.43389584915668,10.5726122905961,8.8564379473877,7.73626695253534,6.98760203987768,7.8221320903196,9.33984049696296,5.23511883968059,3.36998930558661,0.621339313086926,0,34.6878386822031,29.9479867727347,23.1396914129417,22.9904485790361,23.3159453177274,21.476374672173,12.7600297147071,6.08184197669123,0.724752362478018,0.576060012515731,0.632022241256357,21.6915980360476,14.6876668745703,4.54722880422283,4.65469408735452,2.58285761215644,1.9231271923195,0.738447635872886,2.01932899896295,0.762068066549998,0.604957110821043,0.584747284438515,0.577271049841977,0.233753804363138,0.453460767230423,15.5390167361845,8.70224409111914,8.05846158547577,12.170944424028,5.06742683718191,10.0733393346996,5.35920947697665,8.52672576860118,3.3885110557024,2.30162618253588,1.14579102687879,2.92150409984269,1.37016503954128,0.755393897389701,3.37511250115903,0.45032120322422,2.71885445390523,1.03552062350364,7.47268902606072,26.7346665178691,23.2197703825622,20.9071776678733,11.528723944539,14.5236371675511,24.4471400581777,22.6638562962784,22.1434254618353,26.0278128116711,25.347929989024,22.4465346249431,23.2230938525308,28.0430167533327,25.6736546231591,20.9569224164552,27.6963539008205,25.0781986602817,25.1372399490017,23.8462250617724,20.9150243955103,22.8943789945545,19.7902037656276,22.2380017447463,26.2565171358772,24.9613093280446,24.6952763378243,27.0961802780978,25.9385857445596,23.0068331379673,24.7947187879524,24.133598182013,22.0984763311632,26.4941998428002,26.2352990934352,24.7312472158566,21.9895711938684,19.5532659183951,20.2765631992974,23.6032818457882,22.4911800551809
|phase1_expression=37.314681375417,0,0,0,0,0.16787927191189,0.233612640595526,0,0.281577444303333,0.468129052643987,0.34243593645101,0,0,0,0,0,0,0,0,0,2.55129870453209,2.18440092641948,3.39559725880616,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,7.11503772252743,3.1253413780952,3.66466620781659,8.2352408324342,10.2456822743767,8.73918635456076,9.06457089424156,7.80602370390262,4.77221555620372,11.7358701652206,1.96222640742402,2.41654801007919,2.3331587888914,11.0589273084036,1.43752564364972,0,0,0,9.51859913333004,8.88253663810146,0.515672092277442,3.84401275633236,5.81890077199236,2.53532561402472,24.0579617769084,14.2287167377782,3.5995988691256,4.94433181283487,4.2628806896766,26.664409836138,17.28982373947,7.98410014775278,4.59020190327748,5.25812403378455,5.14171771926846,9.718215801871,2.57230678351403,2.30029130443767,4.5960939330501,4.40463523997555,3.19218345212969,1.38245879930619,4.87979264601717,3.65950574409639,5.73004707612436,2.51264699101243,5.6276261003168,3.51435969886663,10.606629077052,11.9592211871246,7.08317894136142,17.4927506599655,21.0844652697932,61.4512716047557,10.3250865237766,0,0.539703191637817,0.649776417447669,1.34408066129201,1.68533304158102,10.5666799998396,8.05336614268893,8.83348936275851,7.18301440861071,17.9657068380045,22.9324715735981,21.3320010945999,0,0.506719730950197,0.505524445014783,0.22836775943812,1.8125651855302,8.01587550950054,41.1160224435742,18.8768596553528,15.2206228188999,11.6056433225519,16.344830291863,8.41966161908826,2.22475470960936,2.16899035379867,0.884610551949874,28.6327324406914,5.30019644304944,9.21262980956922,0,1.17112318804619,1.46612694769419,0.766371165625774,0.11981512450592,0,0.508280908292259,1.9472783122627,0.915001205637253,3.01570445070875,2.60736480288415,3.3243009452943,1.24672826735736,3.40706652442291,40.9394242678271,6.22034853050465,2.77995034277042,3.78795340595653,27.7156543510559,22.5304062344803,31.1507484563254,32.4015358346787,24.697249191932,20.8825364064305,19.3962569838639,13.9699820199068,14.4430555265004,21.5580931391314,18.2989169130507,26.9610750885917,29.1949611686878,49.1035554796255,50.2108412835382,53.9382863078117,0,0.257347907114715,0,13.6703009873431,14.3060896588469,14.5850269783422,17.2823656977203,15.5443743080449,16.9693824176116,13.0219009060228,12.0723030629829,11.3262382096154,19.0889425899637,20.1925980817287,9.07970666913584,7.30999937126662,7.46470391989572,2.01309628140558,5.67782861123144,8.02655976558419,0.330418782983798,1.32225283331772,13.650448034255,10.6828869055802,14.5620231293965,8.47070803418039,6.89371935919098,8.17970192284004,1.89811624617805,5.27036655116835,7.28872105520782,5.57078121715222,6.82374304916921,3.59527763461689,3.02593269824572,1.39398891278057,35.2782295772732,37.2450151107716,32.6852433451933,32.9915151109409,32.7779703313288,26.4412040986501,34.0212569728504,4.13308414342886,8.79192875911699,3.33172342588861,2.37162101669719,5.5058884886311,6.4864468387357,2.24862112384854,2.23146133527353,2.41177159752417,2.80088436959562,1.15078454980324,1.94562272130042,2.74561413188081,8.62609239164127,6.69853705803306,6.86482880852033,2.77836765741823,4.30553792452589,1.4473305640901,2.58654466233247,28.4237117655727,27.2151510658183,32.4213113830609,29.5709712843513,21.775813467436,18.091316707337,15.8058254764817,35.7831777121054,36.0987444127503,48.3147949032186,5.73521601505083,6.38934432903814,5.35201516751593,0,1.63171705145613,6.39293554924747,8.27810238914197,3.85321415970701,3.7507739709505,10.0000316679772,6.05930225290495,9.78075480190396,8.98009111882268,8.40151251157916,7.64700153448166,10.9171350300373,11.6061377623421,8.09621403349789,7.89090816360542,12.2539211163422,4.81981974632711,33.2139799387349,43.6260728984775,41.861948553869,11.8778488540226,1.32745138339963,10.6823479908192,11.7906187216253,7.73280826999182,13.5838870725155,16.908933136916,17.0562673491026,20.3578888507403,21.3898427030833,6.32073515871632,6.32511651449993,7.21948802737308,4.08527526904546,23.7680644121329,24.4487912349406,29.5785108343597,32.6306029901783,38.8844022372514,33.2389021616284,15.5277124048446,2.3467170806371,4.66030555900404,8.82113592219848,6.43056386471772,30.1938477921343,42.4602991494217,20.6514155125426,11.3257220824092,4.66369338607761,4.26478194624172,0.683483523191411,7.84270098260245,9.07453184111587,5.08594833912666,1.23024804948923,1.60144721244566,0.169978429993855,0.139951452323658,0.967399816630967,0.954670618015114,7.43389584915668,10.5726122905961,8.8564379473877,7.73626695253534,6.98760203987768,7.8221320903196,9.33984049696296,5.23511883968059,3.36998930558661,0.621339313086926,0,34.6878386822031,29.9479867727347,23.1396914129417,22.9904485790361,23.3159453177274,21.476374672173,12.7600297147071,6.08184197669123,0.724752362478018,0.576060012515731,0.632022241256357,21.6915980360476,14.6876668745703,4.54722880422283,4.65469408735452,2.58285761215644,1.9231271923195,0.738447635872886,2.01932899896295,0.762068066549998,0.604957110821043,0.584747284438515,0.577271049841977,0.233753804363138,0.453460767230423,15.5390167361845,8.70224409111914,8.05846158547577,12.170944424028,5.06742683718191,10.0733393346996,5.35920947697665,8.52672576860118,3.3885110557024,2.30162618253588,1.14579102687879,2.92150409984269,1.37016503954128,0.755393897389701,3.37511250115903,0.45032120322422,2.71885445390523,1.03552062350364,7.47268902606072,26.7346665178691,23.2197703825622,20.9071776678733,11.528723944539,14.5236371675511,24.4471400581777,22.6638562962784,22.1434254618353,26.0278128116711,25.347929989024,22.4465346249431,23.2230938525308,28.0430167533327,25.6736546231591,20.9569224164552,27.6963539008205,25.0781986602817,25.1372399490017,23.8462250617724,20.9150243955103,22.8943789945545,19.7902037656276,22.2380017447463,26.2565171358772,24.9613093280446,24.6952763378243,27.0961802780978,25.9385857445596,23.0068331379673,24.7947187879524,24.133598182013,22.0984763311632,26.4941998428002,26.2352990934352,24.7312472158566,21.9895711938684,19.5532659183951,20.2765631992974,23.6032818457882,22.4911800551809
|short_description=p1@Lhfpl2
}}
}}

Revision as of 20:38, 17 April 2012

Short description:p1@Lhfpl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lhfpl2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000054274, ENSMUST00000144838, NM_172589, uc007rlp.1_5end
EntrezGene:Lhfpl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lhfpl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G737.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.06
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C826.66
Mouse Microglia, donor2.CNhs12634.11736-123E817.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D917.49
Mouse Schwann, donor2.CNhs12573.11746-123F921.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G361.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C541.12
adrenal gland, embryo E16.CNhs11004.1254-43D618.88
adrenal gland, embryo E17.CNhs11043.1263-45I115.22
adrenal gland, embryo E18.CNhs11026.1262-18F511.61
adrenal gland, neonate N00.CNhs11191.1311-23C116.34
adrenal gland, neonate N25.CNhs11223.1377-27I38.42
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F528.63
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B140.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C627.72
eyeball, embryo E14.CNhs10521.399-16E222.53
eyeball, embryo E15.CNhs10593.426-16C931.15
eyeball, embryo E17.CNhs11023.1261-18D432.40
eyeball, neonate N00.CNhs11207.633-15C624.70
eyeball, neonate N01.CNhs11140.1532-43E720.88
eyeball, neonate N02.CNhs11205.1551-44G819.40
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E214.44
forelimb, embryo E12.CNhs10600.359-14H221.56
forelimb, embryo E13.CNhs10589.384-1E218.30
forelimb, embryo E14.CNhs10577.413-26A826.96
forelimb, embryo E15.CNhs11007.437-20E729.19
forelimb, embryo E17.CNhs10598.1517-43C449.10
forelimb, embryo E18.CNhs11008.1520-43B550.21
gonad, embryo E13.CNhs11044.1564-45I653.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E913.67
heart, embryo E12.CNhs11015.353-12F514.31
heart, embryo E13.CNhs11013.376-3I914.59
heart, embryo E14.CNhs10597.403-26D417.28
heart, embryo E15.CNhs11017.431-16C815.54
heart, embryo E16.CNhs11021.457-17C616.97
heart, embryo E17.CNhs11025.479-18E513.02
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E311.33
heart, neonate N03.CNhs11221.1349-25I219.09
heart, neonate N10.CNhs11118.749-24G120.19
heart, neonate N16.CNhs11209.782-15G19.08
heart, neonate N20.CNhs11127.821-26I67.31
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I513.65
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D814.56
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I935.28
kidney, embryo E15.CNhs10997.434-16F837.25
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I232.99
kidney, embryo E18.CNhs11001.1288-20C732.78
kidney, neonate N00.CNhs11214.646-21G726.44
kidney, neonate N10.CNhs11206.758-6D534.02
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F38.79
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G228.42
lung, embryo E14.CNhs10604.404-26F827.22
lung, embryo E15.CNhs11020.432-17C532.42
lung, embryo E16.CNhs10998.458-17B629.57
lung, embryo E17.CNhs10605.480-44A621.78
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C615.81
lung, neonate N06.CNhs11212.683-20E535.78
lung, neonate N07.CNhs11111.715-19A336.10
lung, neonate N10.CNhs11219.750-23E648.31
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I733.21
ovary, embryo E18.CNhs11040.505-44H743.63
ovary, neonate N00.CNhs11217.1299-22I441.86
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F410.68
pancreas, embryo E15.CNhs11042.1556-45F211.79
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G313.58
pancreas, embryo E18.CNhs10580.1535-43I716.91
pancreas, neonate N00.CNhs11105.645-26G917.06
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D821.39
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E623.77
pituitary gland, embryo E13.CNhs11009.370-44C724.45
pituitary gland, embryo E14.CNhs11037.398-44A529.58
pituitary gland, embryo E15.CNhs10592.427-16B932.63
pituitary gland, embryo E16.CNhs11036.449-43F638.88
pituitary gland, embryo E17.CNhs11039.1265-44F533.24
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G430.19
skin, neonate N03.CNhs11215.662-22H342.46
skin, neonate N06.CNhs11097.693-20I520.65
skin, neonate N10.CNhs11108.762-6C411.33
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D48.86
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B87.82
stomach, neonate N07.CNhs11210.718-18A99.34
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F534.69
testis, embryo E15.CNhs11034.443-27C529.95
testis, embryo E16.CNhs11033.470-26G523.14
testis, embryo E17.CNhs11029.486-18I522.99
testis, embryo E18.CNhs11027.503-18G523.32
testis, neonate N00.CNhs11189.1300-22B721.48
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I421.69
thymus, embryo E15.CNhs11005.430-45I214.69
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.06
urinary bladder, adult.CNhs10481.879-12E412.17
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E510.07
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I87.47
whole body, embryo E12.CNhs10587.857-27C926.73
whole body, embryo E13.CNhs10512.372-23H223.22
whole body, embryo E14.5.CNhs10578.420-27D220.91
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G525.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.85
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G526.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G524.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.49
whole body, embryo E17.5.CNhs10513.490-9F926.24
whole body, embryo E17.CNhs10517.475-3I524.73
whole body, embryo E18.CNhs10516.493-3B321.99
whole body, neonate N00.CNhs10525.657-19C219.55
whole body, neonate N01.CNhs10576.659-23C620.28
whole body, neonate N06.CNhs10515.692-21D123.60
whole body, neonate N10.CNhs10518.761-6B422.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:94827712..94827793,%2B&oldid=760016"