Personal tools

FFCP PHASE1:Mm9::chr12:16596549..16596632,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr12:16596549..16596632,-
|short_description=p1@Lpin1
|description=CAGE_peak_1_at_Lpin1_5end
|association_with_transcript=0bp_to_ENSMUST00000048538,ENSMUST00000067124,ENSMUST00000111067,NM_001130412,NM_015763,NM_172950,uc007nbs.2,uc007nbt.2,uc007nbu.2,uc007nbv.1_5end
|EntrezGene=14245
|EntrezGene=14245
|HGNC=
|HGNC=
|UniProt=E9QKQ5,Q91ZP3,Q8CD95,Q3U3C3
|UniProt=E9QKQ5,Q91ZP3,Q8CD95,Q3U3C3
|association_with_transcript=0bp_to_ENSMUST00000048538,ENSMUST00000067124,ENSMUST00000111067,NM_001130412,NM_015763,NM_172950,uc007nbs.2,uc007nbt.2,uc007nbu.2,uc007nbv.1_5end
|description=CAGE_peak_1_at_Lpin1_5end
|id=chr12:16596549..16596632,-
|ontology_enrichment_disease=
|phase1_expression=12.6517589212787,3.48975407639361,6.82498859084304,1.51232105653415,2.50447864973174,9.73699777088961,11.6806320297763,17.6898953114959,18.4433226018683,23.4064526321993,3.93801326918661,2.39316476986009,35.0961496358972,21.2431577878164,15.6561588053361,13.970793449898,13.9912375625629,9.93705820878449,11.6547268564878,11.0341309467488,29.6801082627234,21.1489726057886,18.8063848180033,7.67963629408352,7.34109699414944,6.31655160526522,3.01533397311352,9.69620547086501,5.89072600314759,2.77233142735924,7.09537634096975,19.6859508772486,14.7615549020297,0,5.48818077527422,2.65975432573588,3.47087905646027,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,47.9666876486949,47.7485346043914,26.0636388069588,20.342174953049,17.2239873540553,15.1583466086786,23.9148775861369,30.0970806494529,18.6878333674463,5.03347818173209,44.247090662692,50.0779760722271,9.00408026125814,13.1805382371828,14.9544906760458,20.2316460859598,25.9205579843296,25.3532561402472,22.7025836486319,22.2323699027785,9.44894703145469,11.8663963508037,7.8152812644071,9.88680364710736,19.9793518767208,12.7538223139428,15.6606888464761,10.3059231062177,16.5677570954206,21.6451170132581,13.5964787128599,14.185129710699,18.3843757322004,48.450987639731,28.4742763929969,36.5583549149859,22.1568963386726,23.1463738314096,18.7528813400434,37.6897048651864,23.0732670112989,34.5324039975591,22.3917724959987,16.7998583342941,21.2495368240843,4.92220256665696,10.0510174942025,29.8560423362728,43.8816177260507,214.870941451649,165.68887983281,214.426217757731,410.840655468257,57.160878993623,16.7021716126497,13.5088722393492,7.77347063922748,10.2815696436977,12.8326477414318,17.8363667794652,0,9.30911476348221,7.85415582972806,5.05524445014783,108.13213409395,34.697676408721,60.119066321254,7.45986905094384,12.1786191324856,13.8369298353635,13.4143150091834,19.7549027987984,50.6436363058592,252.880451992264,510.001931856528,32.7305904221453,19.7355556935839,23.1883594383413,21.3345111379498,5.59175283654366,38.0615036115011,38.9570874673026,9.19645398750929,13.0598485711453,13.197860081855,13.8506547509641,53.3254676281169,45.7500602818627,27.1413400563787,23.6401075461496,19.4343747571051,41.9731850010311,33.0972176658226,12.6280811174392,36.2024284475371,39.6774730740869,82.7036493633843,9.88915366516548,9.19608417733892,10.9837899181263,13.7141384230501,21.4314972326683,22.6761284904184,19.5836604329833,78.1284179631827,8.83828771024653,7.94245536704841,8.79755620819744,8.11024209982027,9.73165372289593,11.1440693287093,9.4659782747654,9.95171334092466,9.83098462238529,7.72043721344146,7.10408748488982,6.83515049367156,14.0715635988658,9.18316513451176,12.5474709860161,13.9702604540657,10.7986979021165,12.556833016522,14.7550370769791,27.2063247715505,17.4433440908289,32.1768229595027,27.4823264360451,23.9767979377545,25.906913604344,23.7545361205858,27.9685631590289,16.9792610425819,3.96502539580558,5.02456076660734,10.024547775156,8.12828351511535,11.8558064416326,17.3447831176075,22.237804384487,18.8323369851434,9.96511029243474,9.71723832871664,17.0907941984183,17.5081695396213,15.7920910566487,6.29173586057955,11.2391785934841,12.9441827615339,5.12103332573321,6.740662243974,14.6520056375005,7.94240178596726,7.17624202520215,15.2194729161991,14.0385112415851,43.2497733580234,38.9356845046609,48.0014967655804,220.857207179926,7.50802975722423,14.1522476481506,17.0895205412489,20.6917323816273,26.5294875727659,36.411496804743,174.919251570093,266.874583271708,21.4157902286704,40.2550978276593,48.0061822492369,22.1546747911338,38.8971472038552,62.2509024921035,54.9985614354239,42.6779869284857,5.87423376488503,4.72598431681875,5.09235257325564,10.3263709246941,25.1259386162724,31.4217605969538,40.0023978108488,22.3841904630791,16.8313164133069,17.6994793209811,46.5371813792696,34.709681355045,33.9925287666552,10.5553898757491,1.63171705145613,223.260979950642,235.374044597937,82.2019020737495,60.2468069083924,16.8852993737976,60.3405516018451,7.2566890465739,14.055794794679,12.9254038639679,13.3822526853429,15.5959071857676,13.8707500086528,12.9539424535966,18.9966307642353,19.3691011193797,27.6336332122754,38.7496432618573,11.9303954457061,15.4742611385897,18.9715641418416,38.4960901185892,7.04063844849446,3.32555912661226,9.8074641473067,16.2416041084425,13.2197113615889,17.0562673491026,7.99774204850512,12.83390562185,17.3820216864699,26.3546521437497,22.6898195146011,105.19583817792,6.66226047915848,9.18446654857557,10.0738406464848,13.6551979904551,22.652839835463,36.2007845324666,66.068893957868,11.7335854031855,12.921756322693,41.2388104362779,28.6902080118175,75.0809584135961,29.4930202898682,19.0995750405018,13.459553779095,13.699599321603,80.2891557705507,18.1123133645724,15.0662413613152,18.3342582096015,17.1415295874269,21.597687979922,13.2691340459783,30.4261389689001,35.8275717948564,35.6555932415413,13.3653886522116,7.90839983952838,6.70954241518601,7.77638453916969,8.78170843260769,10.6997656235627,7.41753905116514,15.4561962206378,8.63794608547298,14.1280320888054,171.489650411991,11.2738587736838,7.7748603942869,8.76929999422617,13.0282296190512,11.1077448190849,13.3475339137715,20.1854450470697,12.7600297147071,19.7135567520336,7.73069186643219,13.5374102941197,28.1249897359079,4.05450430580328,5.03283690107653,6.36612032591196,8.95133478337407,14.5037388990323,10.4570041082373,11.0767145380933,15.9526990918073,13.183777551315,16.0313634367576,21.1483601205263,17.4143433368996,24.0766418494032,106.336549915534,8.43546622821446,6.81825310232015,21.489230894602,31.8762830153114,13.5131382324851,20.696133542201,11.3615240911905,55.6745035479253,14.6835479080437,16.1113832777512,13.1765968091061,9.6237782112465,14.3867329151835,21.9064230243013,11.4753825039407,22.0657389579868,20.8445508132734,17.6038505995619,8.51056250190249,14.3648954424371,10.2440163452481,13.6139761558245,14.2536950587028,27.3926827590521,56.4506688616103,53.5691148821125,59.3700537744858,60.6473308233114,57.7932803749747,60.1718029021583,46.165263182652,50.5798703998467,50.7155190878065,49.0582502021566,38.5894805396369,45.7194852498981,56.0436825092497,59.3211648141621,44.2301335577186,50.4031289492518,47.9256741794115,56.2490632367111,56.089190727537,50.7687647350059,54.8783918618318,53.1400817104443,47.8030480737433,54.9919426224584,45.3185769234345,40.4853422563566,49.5169562235324,42.7625681673266,38.0026023632849,25.7304895276084,50.5292274242082,47.0567608365773,180.576185472988,43.4565095665446,53.3296021926969
|phase1_expression=12.6517589212787,3.48975407639361,6.82498859084304,1.51232105653415,2.50447864973174,9.73699777088961,11.6806320297763,17.6898953114959,18.4433226018683,23.4064526321993,3.93801326918661,2.39316476986009,35.0961496358972,21.2431577878164,15.6561588053361,13.970793449898,13.9912375625629,9.93705820878449,11.6547268564878,11.0341309467488,29.6801082627234,21.1489726057886,18.8063848180033,7.67963629408352,7.34109699414944,6.31655160526522,3.01533397311352,9.69620547086501,5.89072600314759,2.77233142735924,7.09537634096975,19.6859508772486,14.7615549020297,0,5.48818077527422,2.65975432573588,3.47087905646027,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,47.9666876486949,47.7485346043914,26.0636388069588,20.342174953049,17.2239873540553,15.1583466086786,23.9148775861369,30.0970806494529,18.6878333674463,5.03347818173209,44.247090662692,50.0779760722271,9.00408026125814,13.1805382371828,14.9544906760458,20.2316460859598,25.9205579843296,25.3532561402472,22.7025836486319,22.2323699027785,9.44894703145469,11.8663963508037,7.8152812644071,9.88680364710736,19.9793518767208,12.7538223139428,15.6606888464761,10.3059231062177,16.5677570954206,21.6451170132581,13.5964787128599,14.185129710699,18.3843757322004,48.450987639731,28.4742763929969,36.5583549149859,22.1568963386726,23.1463738314096,18.7528813400434,37.6897048651864,23.0732670112989,34.5324039975591,22.3917724959987,16.7998583342941,21.2495368240843,4.92220256665696,10.0510174942025,29.8560423362728,43.8816177260507,214.870941451649,165.68887983281,214.426217757731,410.840655468257,57.160878993623,16.7021716126497,13.5088722393492,7.77347063922748,10.2815696436977,12.8326477414318,17.8363667794652,0,9.30911476348221,7.85415582972806,5.05524445014783,108.13213409395,34.697676408721,60.119066321254,7.45986905094384,12.1786191324856,13.8369298353635,13.4143150091834,19.7549027987984,50.6436363058592,252.880451992264,510.001931856528,32.7305904221453,19.7355556935839,23.1883594383413,21.3345111379498,5.59175283654366,38.0615036115011,38.9570874673026,9.19645398750929,13.0598485711453,13.197860081855,13.8506547509641,53.3254676281169,45.7500602818627,27.1413400563787,23.6401075461496,19.4343747571051,41.9731850010311,33.0972176658226,12.6280811174392,36.2024284475371,39.6774730740869,82.7036493633843,9.88915366516548,9.19608417733892,10.9837899181263,13.7141384230501,21.4314972326683,22.6761284904184,19.5836604329833,78.1284179631827,8.83828771024653,7.94245536704841,8.79755620819744,8.11024209982027,9.73165372289593,11.1440693287093,9.4659782747654,9.95171334092466,9.83098462238529,7.72043721344146,7.10408748488982,6.83515049367156,14.0715635988658,9.18316513451176,12.5474709860161,13.9702604540657,10.7986979021165,12.556833016522,14.7550370769791,27.2063247715505,17.4433440908289,32.1768229595027,27.4823264360451,23.9767979377545,25.906913604344,23.7545361205858,27.9685631590289,16.9792610425819,3.96502539580558,5.02456076660734,10.024547775156,8.12828351511535,11.8558064416326,17.3447831176075,22.237804384487,18.8323369851434,9.96511029243474,9.71723832871664,17.0907941984183,17.5081695396213,15.7920910566487,6.29173586057955,11.2391785934841,12.9441827615339,5.12103332573321,6.740662243974,14.6520056375005,7.94240178596726,7.17624202520215,15.2194729161991,14.0385112415851,43.2497733580234,38.9356845046609,48.0014967655804,220.857207179926,7.50802975722423,14.1522476481506,17.0895205412489,20.6917323816273,26.5294875727659,36.411496804743,174.919251570093,266.874583271708,21.4157902286704,40.2550978276593,48.0061822492369,22.1546747911338,38.8971472038552,62.2509024921035,54.9985614354239,42.6779869284857,5.87423376488503,4.72598431681875,5.09235257325564,10.3263709246941,25.1259386162724,31.4217605969538,40.0023978108488,22.3841904630791,16.8313164133069,17.6994793209811,46.5371813792696,34.709681355045,33.9925287666552,10.5553898757491,1.63171705145613,223.260979950642,235.374044597937,82.2019020737495,60.2468069083924,16.8852993737976,60.3405516018451,7.2566890465739,14.055794794679,12.9254038639679,13.3822526853429,15.5959071857676,13.8707500086528,12.9539424535966,18.9966307642353,19.3691011193797,27.6336332122754,38.7496432618573,11.9303954457061,15.4742611385897,18.9715641418416,38.4960901185892,7.04063844849446,3.32555912661226,9.8074641473067,16.2416041084425,13.2197113615889,17.0562673491026,7.99774204850512,12.83390562185,17.3820216864699,26.3546521437497,22.6898195146011,105.19583817792,6.66226047915848,9.18446654857557,10.0738406464848,13.6551979904551,22.652839835463,36.2007845324666,66.068893957868,11.7335854031855,12.921756322693,41.2388104362779,28.6902080118175,75.0809584135961,29.4930202898682,19.0995750405018,13.459553779095,13.699599321603,80.2891557705507,18.1123133645724,15.0662413613152,18.3342582096015,17.1415295874269,21.597687979922,13.2691340459783,30.4261389689001,35.8275717948564,35.6555932415413,13.3653886522116,7.90839983952838,6.70954241518601,7.77638453916969,8.78170843260769,10.6997656235627,7.41753905116514,15.4561962206378,8.63794608547298,14.1280320888054,171.489650411991,11.2738587736838,7.7748603942869,8.76929999422617,13.0282296190512,11.1077448190849,13.3475339137715,20.1854450470697,12.7600297147071,19.7135567520336,7.73069186643219,13.5374102941197,28.1249897359079,4.05450430580328,5.03283690107653,6.36612032591196,8.95133478337407,14.5037388990323,10.4570041082373,11.0767145380933,15.9526990918073,13.183777551315,16.0313634367576,21.1483601205263,17.4143433368996,24.0766418494032,106.336549915534,8.43546622821446,6.81825310232015,21.489230894602,31.8762830153114,13.5131382324851,20.696133542201,11.3615240911905,55.6745035479253,14.6835479080437,16.1113832777512,13.1765968091061,9.6237782112465,14.3867329151835,21.9064230243013,11.4753825039407,22.0657389579868,20.8445508132734,17.6038505995619,8.51056250190249,14.3648954424371,10.2440163452481,13.6139761558245,14.2536950587028,27.3926827590521,56.4506688616103,53.5691148821125,59.3700537744858,60.6473308233114,57.7932803749747,60.1718029021583,46.165263182652,50.5798703998467,50.7155190878065,49.0582502021566,38.5894805396369,45.7194852498981,56.0436825092497,59.3211648141621,44.2301335577186,50.4031289492518,47.9256741794115,56.2490632367111,56.089190727537,50.7687647350059,54.8783918618318,53.1400817104443,47.8030480737433,54.9919426224584,45.3185769234345,40.4853422563566,49.5169562235324,42.7625681673266,38.0026023632849,25.7304895276084,50.5292274242082,47.0567608365773,180.576185472988,43.4565095665446,53.3296021926969
|short_description=p1@Lpin1
}}
}}

Revision as of 18:33, 17 April 2012

Short description:p1@Lpin1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lpin1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000048538, ENSMUST00000067124, ENSMUST00000111067, NM_001130412, NM_015763, NM_172950, uc007nbs.2, uc007nbt.2, uc007nbu.2, uc007nbv.1_5end
EntrezGene:Lpin1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lpin1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.68
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.24
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B95.89
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D847.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D947.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B326.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C430.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I944.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A150.08
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E325.92
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E819.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D348.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.69
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.25
Mouse Schwann, donor1.CNhs12507.11728-123D94.92
Mouse Schwann, donor2.CNhs12573.11746-123F910.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C4214.87
Mouse hepatocyte, donor3.CNhs12615.11637-122C8165.69
Mouse hepatocyte, donor6.CNhs13090.11822-124F4214.43
Mouse hepatocyte, donor8.CNhs13091.11824-124F6410.84
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A757.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6108.13
accessory axillary lymph node, adult.CNhs10475.1063-29H934.70
adrenal gland, adult.CNhs10508.49-24D760.12
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F513.41
adrenal gland, neonate N00.CNhs11191.1311-23C119.75
adrenal gland, neonate N25.CNhs11223.1377-27I350.64
amnion, adult pregnant day17.5.CNhs10488.583-22A8252.88
aorta, adult.CNhs10498.46-23H1510.00
bone (os femoris), adult.CNhs10483.56-12G232.73
bone (os femoris), neonate N02.CNhs11227.1985-43F519.74
bone (os femoris), neonate N16.CNhs11225.1525-43A623.19
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B238.06
cerebellum, neonate N30.CNhs11135.1395-42I238.96
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.85
corpora quadrigemina, adult.CNhs10501.16-22A453.33
corpus striatum, adult.CNhs10487.19-21D845.75
corpus striatum, neonate N00.CNhs11226.630-43F127.14
cortex, adult.CNhs10473.12-14D523.64
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F241.97
diencephalon, neonate N30.CNhs11201.1388-42B233.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.20
epididymis, adult.CNhs10490.58-23B239.68
eyeball, adult.CNhs10484.31-12G482.70
eyeball, embryo E12.CNhs11016.345-16C69.89
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C910.98
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C621.43
eyeball, neonate N01.CNhs11140.1532-43E722.68
eyeball, neonate N02.CNhs11205.1551-44G819.58
eyeball, neonate N16.CNhs11188.777-19A278.13
forelimb, embryo E11.CNhs10596.335-25E28.84
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E28.80
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B59.47
gonad, embryo E13.CNhs11044.1564-45I69.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.72
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F514.07
heart, embryo E13.CNhs11013.376-3I99.18
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C813.97
heart, embryo E16.CNhs11021.457-17C610.80
heart, embryo E17.CNhs11025.479-18E512.56
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E327.21
heart, neonate N03.CNhs11221.1349-25I217.44
heart, neonate N10.CNhs11118.749-24G132.18
heart, neonate N16.CNhs11209.782-15G127.48
heart, neonate N20.CNhs11127.821-26I623.98
heart, neonate N25.CNhs11196.1351-25D325.91
heart, neonate N30.CNhs11202.1390-42D223.75
hippocampus, adult.CNhs10478.13-16E827.97
hippocampus, neonate N00.CNhs11228.627-43G116.98
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I510.02
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D811.86
intestine, embryo E16.CNhs10585.463-22H417.34
intestine, embryo E17.CNhs10582.482-18D322.24
intestine, embryo E18.CNhs10526.1289-20F718.83
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E99.72
intestine, neonate N06.CNhs11102.688-20B817.09
intestine, neonate N07.CNhs11095.720-20F217.51
intestine, neonate N10.CNhs11098.755-23A515.79
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G112.94
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G715.22
kidney, neonate N10.CNhs11206.758-6D514.04
kidney, neonate N20.CNhs11113.832-19I143.25
kidney, neonate N25.CNhs11122.1353-25F338.94
kidney, neonate N30.CNhs11203.1385-42H148.00
liver, adult pregnant day01.CNhs10466.508-5B2220.86
liver, embryo E12.CNhs10601.355-15F87.51
liver, embryo E13.CNhs10524.378-3H614.15
liver, embryo E14.CNhs10594.409-16E117.09
liver, embryo E15.CNhs10520.433-16D720.69
liver, embryo E16.CNhs10523.462-17F526.53
liver, embryo E17.CNhs10510.481-18A336.41
liver, embryo E18.CNhs10579.499-43G4174.92
liver, neonate N00.CNhs11117.641-24F4266.87
liver, neonate N03.CNhs11123.1345-25G221.42
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H248.01
liver, neonate N10.CNhs11115.751-24B922.15
liver, neonate N20.CNhs11220.823-25A338.90
liver, neonate N25.CNhs11198.1368-26H162.25
liver, neonate N30.CNhs11106.1382-42D155.00
lung, adult.CNhs10474.28-22B142.68
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A625.13
lung, embryo E18.CNhs10583.1287-20I631.42
lung, neonate N00.CNhs11224.640-42C640.00
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A316.83
lung, neonate N10.CNhs11219.750-23E617.70
lung, neonate N20.CNhs11109.822-18A446.54
lung, neonate N25.CNhs11119.1359-25C734.71
lung, neonate N30.CNhs11133.1394-42H233.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B6223.26
mammary gland, adult pregnant day19.CNhs10476.588-5H2235.37
medulla oblongata, adult.CNhs10477.17-12C282.20
medulla oblongata, neonate N30.CNhs11200.1396-42A360.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C260.34
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.87
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.37
olfactory brain, adult.CNhs10489.18-22I927.63
ovary, adult.CNhs10507.91-2I738.75
ovary, embryo E18.CNhs11040.505-44H711.93
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G618.97
pancreas, adult.CNhs10486.34-16E438.50
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G316.24
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G917.06
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G8105.20
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C79.18
pituitary gland, embryo E14.CNhs11037.398-44A510.07
pituitary gland, embryo E15.CNhs10592.427-16B913.66
pituitary gland, embryo E16.CNhs11036.449-43F622.65
pituitary gland, embryo E17.CNhs11039.1265-44F536.20
pituitary gland, neonate N00.CNhs11190.1308-22E966.07
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G312.92
prostate, adult.CNhs10470.859-1F841.24
skin, adult.CNhs10492.30-1C328.69
skin, neonate N00.CNhs11124.650-25G475.08
skin, neonate N03.CNhs11215.662-22H329.49
skin, neonate N06.CNhs11097.693-20I519.10
skin, neonate N10.CNhs11108.762-6C413.46
small intestine, neonate N16.CNhs11114.790-21I113.70
spinal cord, adult.CNhs10505.24-13C980.29
spleen, adult.CNhs10465.25-2G218.11
spleen, embryo E16.CNhs11035.461-43C115.07
spleen, embryo E18.CNhs11011.1271-21F218.33
spleen, neonate N10.CNhs11116.752-24D117.14
spleen, neonate N20.CNhs11112.824-19H121.60
spleen, neonate N25.CNhs11099.1354-25G313.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C935.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.66
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E37.91
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C610.70
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A915.46
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I114.13
submandibular gland, adult.CNhs10469.59-29C1171.49
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F57.77
testis, embryo E15.CNhs11034.443-27C58.77
testis, embryo E16.CNhs11033.470-26G513.03
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G513.35
testis, neonate N00.CNhs11189.1300-22B720.19
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D919.71
testis, neonate N20.CNhs11110.839-18H37.73
testis, neonate N30.CNhs11130.1391-42E213.54
thymus, adult.CNhs10471.38-12B528.12
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C56.37
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G414.50
thymus, neonate N02.CNhs11181.1541-43F810.46
thymus, neonate N03.CNhs11137.2104-43C711.08
thymus, neonate N06.CNhs11197.681-26C415.95
thymus, neonate N07.CNhs11211.713-19D313.18
thymus, neonate N10.CNhs11194.748-24E416.03
thymus, neonate N20.CNhs11186.820-7A221.15
thymus, neonate N25.CNhs11125.1362-25G717.41
thymus, neonate N30.CNhs11132.1393-42G224.08
tongue, adult.CNhs10499.32-1B4106.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.49
urinary bladder, adult.CNhs10481.879-12E431.88
uterus, adult pregnant day19.CNhs10497.590-15F513.51
uterus, adult.CNhs10509.92-27E520.70
vagina, adult.CNhs10502.89-27D511.36
vesicular gland, adult.CNhs10491.51-27F855.67
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I88.51
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H210.24
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B114.25
whole body, embryo E16.CNhs10514.453-14F227.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G556.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G553.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G559.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G560.65
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G557.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G560.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G546.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G550.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G549.06
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G545.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G556.04
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G559.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G544.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G550.40
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G547.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G556.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G556.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G550.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G554.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G553.14
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G547.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G554.99
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G545.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G540.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G549.52
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G542.76
whole body, embryo E17.5.CNhs10513.490-9F938.00
whole body, embryo E17.CNhs10517.475-3I525.73
whole body, embryo E18.CNhs10516.493-3B350.53
whole body, neonate N00.CNhs10525.657-19C247.06
whole body, neonate N01.CNhs10576.659-23C6180.58
whole body, neonate N06.CNhs10515.692-21D143.46
whole body, neonate N10.CNhs10518.761-6B453.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:16596549..16596632,-&oldid=748706"