Personal tools

FFCP PHASE1:Mm9::chr10:39451905..39451946,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:39451905..39451946,+
|short_description=p1@Rev3l
|description=CAGE_peak_1_at_Rev3l_5end
|association_with_transcript=0bp_to_ENSMUST00000019986,ENSMUST00000131186_5end
|EntrezGene=19714
|EntrezGene=19714
|HGNC=
|HGNC=
|UniProt=Q61493,Q9Z281
|UniProt=Q61493,Q9Z281
|association_with_transcript=0bp_to_ENSMUST00000019986,ENSMUST00000131186_5end
|description=CAGE_peak_1_at_Rev3l_5end
|id=chr10:39451905..39451946,+
|ontology_enrichment_disease=
|phase1_expression=29.7876855614917,21.287499866001,14.1049764210756,28.1291716515352,30.0537437967808,23.5030980676646,19.3898491694286,15.6239221364307,16.3314917695933,15.4482587372516,7.36237263369671,6.94017783259427,18.318478102639,20.0192721539504,12.3250611871795,20.0450514715928,10.4934281719222,20.5050407482854,22.4867671113412,15.7024171165271,26.4484632369827,10.6241317784947,6.00759515019551,13.2793710918528,10.782236210157,10.3361753540704,11.630573896295,14.8675150553263,10.0712412311878,17.1380488236753,7.76056787293567,13.3356441426523,20.2971379902908,31.6963362030877,21.6638714813456,13.2987716286794,25.1128308202714,14.6486070757918,6.2506827561904,14.1351410872926,18.2351761289614,12.9778642142105,14.5653105909346,22.6614272356039,18.2478476195126,30.1016673545158,10.9534788208725,3.70642765846759,3.73466510648602,5.8328969722285,2.79972843250725,5.75010257459886,25.8385213328914,26.1130371124084,24.1987535382574,6.94600477297057,12.3209379173665,9.7977697532714,27.7173551377649,23.8045940672415,19.0149421051854,4.06613438482959,5.33576877666684,3.1496490104849,3.9554654502679,0,4.49400165777607,8.06858441175265,14.2054768862614,8.77538599155989,11.9885227970288,21.9951257990929,20.5407743085001,17.0262210908786,12.4599112323707,7.35375029288017,39.6417171597799,16.4716666129892,16.2822925251618,28.6193244374521,22.2314973953855,23.962015045611,8.37548997004143,16.8828783009504,20.4749652020926,71.3001176846276,51.2538050876771,39.3302830691384,6.13382165998791,8.99301565270748,17.102004833399,12.9063581547208,4.75979933595425,10.2543606411185,11.0461990966104,12.9927797258227,15.870219474888,16.5317412900716,13.2490862347463,11.3068663843309,32.9573602277432,50.047326191584,56.0571527354621,42.6640021891999,3.89683873820185,3.29367825117628,5.05524445014783,15.186456002635,24.081223179187,21.3756680253348,17.1750473498474,17.6589977421042,16.3737003051802,17.0316583824463,37.8635636976969,17.7189893774842,19.5284024510155,18.7979163995885,22.1152637987469,25.0738617418484,26.0592991783264,21.819386391085,26.0948465705371,52.99332425909,61.3678850963423,15.0719662573069,14.8570754387341,7.7987355029143,13.5965142968179,25.1648274200102,26.992535566299,60.3140890141749,21.2065670634577,25.5715457330331,20.9865925005156,26.76980840618,38.4952795354196,25.7522429162893,24.0086620511991,23.3590460033986,27.7156543510559,20.921091503446,24.6685117833328,30.7437828384859,47.6935859050808,43.5586648968489,45.0705295132296,70.6260202117513,11.6406716183735,33.6608822698718,30.2635933561992,23.6731391021781,32.2534809101694,26.4671646556847,31.8962311432312,30.253208556411,5.61770549850588,7.20574139921202,6.81992398549422,22.9909607514407,28.1431271977315,21.9675714982438,26.7521551211288,28.3340493716262,27.4595460939533,20.2304531932855,25.4859731329638,29.8919276459954,26.9878153858108,25.2817894681807,25.2123997687611,20.4679982395465,17.564009223284,18.788898626452,18.9260953707715,52.8929707629522,17.1817767151575,16.3959351331397,20.2623838008472,27.6361639513922,29.2529137201152,28.235693447268,24.4615848229357,19.7834651157062,16.1339880925134,18.4462829290892,28.4008785944305,26.6601672535142,24.37051088989,22.4704852163555,19.4524244887225,21.706398784726,7.2073802362171,31.189843942456,30.4310886317317,30.1403965211065,33.3598277928316,37.0317129020882,37.6257395889331,25.0937251565324,23.3928104483648,23.6922554729857,10.0793893209631,18.6866518402025,16.7075145846223,18.2138311031732,20.2860121388503,18.3294641411837,17.0599320693551,16.686375972147,21.8882556146298,13.1789478330279,21.5652309791032,24.1891615984527,22.1546747911338,15.6598904327209,16.325164630494,15.4381926836277,16.0735275444946,26.7182890596384,34.2226450528254,31.4028408684098,33.5607055052558,43.5516269348721,38.8011134644202,45.4661399508671,52.019597555043,41.1924322746721,43.3716970748365,35.2306126638837,22.7944176062982,29.0744607748838,10.5553898757491,13.5976420954677,14.2611639175521,15.452457793065,18.9449696185595,21.2153152731888,17.5410391553043,26.0045055020504,23.0321000173867,23.0358859135017,36.8374010123086,22.7020358054924,34.7565931568535,43.5937857414802,25.0982635038434,30.9791209385991,32.4135977916149,39.5225219198823,34.2075605351927,18.8749539887291,45.7712355783549,47.6763655390628,37.1686387351896,23.5497217070332,20.5580018736031,25.4616857670462,15.9463022155617,33.5104311258881,33.3372498187005,38.8981090540931,30.658774541086,30.3395287618383,22.1379078007497,30.9406629744561,30.6395645178409,27.0091641046965,7.24408629183425,29.1498367642966,37.596129532162,25.6851097346982,32.9098041204242,9.74287837166718,15.2536610241412,13.9809166770121,28.668691747145,21.9298716412168,47.793470301988,29.6739590646527,24.2325858326367,25.2776985607394,20.6951394007194,22.6218868452822,22.042343622923,21.2578474002119,25.3716502496505,31.2691638627787,28.7057878214153,23.5641518402718,15.6380155594347,12.0358248998346,14.0963973280512,4.77335309007557,27.3630634447682,38.6306987541013,32.9416289506494,31.3632444021703,32.0992968706881,33.1766292106659,38.5991638237319,25.6520823144349,21.256855619854,16.776161453347,67.0794597034186,32.5946070375874,22.005979230794,35.3901162786167,25.444485225113,34.9739179765911,54.2190442543383,36.457227756306,39.6368321929187,33.8217769156408,46.3728310075163,41.3974568022914,14.5962155008918,18.8988161183282,17.1495486330689,23.9895772194425,25.0338507024394,32.6931622694315,29.2425263805663,33.1169955829924,38.1034033274999,33.9784243911153,38.3984050114625,38.0998892895705,47.9195298944433,21.9928472106755,3.99574716073316,7.98453323824334,4.86865387455827,20.28490737338,26.838593989519,47.2531190609544,20.7937327706694,30.5958983461572,28.8023439734704,24.8575627713876,26.3531936182122,17.7008777813998,15.7568979547248,14.3524840504043,14.8504950050997,9.90706647093285,17.672553950384,16.5683299760582,18.8892972603202,31.5229649986815,29.3661801897111,30.3883396335368,31.0227480689414,31.4372399449524,38.0041904540762,37.086310303001,39.7939819893851,36.3883984939868,38.2753742834262,38.6683999841456,32.4936030920492,33.5491798601515,34.0592330906787,30.4827962421167,36.3876783466846,30.6725660537291,33.7910438658711,32.5309613497018,31.8868404718436,32.1231209148401,34.8116837323089,32.9936365755386,38.5848459702855,38.7534904143878,38.597802276155,30.2530168153519,33.9510284614654,39.2799590160417,30.2519296216644,37.1361898555874,27.0092488491995,33.7762313785406,35.6877230315112,25.4806789496705,29.0075194472306,32.2306581072447,37.875089749631,29.7798415811346,22.9549157264217
|phase1_expression=29.7876855614917,21.287499866001,14.1049764210756,28.1291716515352,30.0537437967808,23.5030980676646,19.3898491694286,15.6239221364307,16.3314917695933,15.4482587372516,7.36237263369671,6.94017783259427,18.318478102639,20.0192721539504,12.3250611871795,20.0450514715928,10.4934281719222,20.5050407482854,22.4867671113412,15.7024171165271,26.4484632369827,10.6241317784947,6.00759515019551,13.2793710918528,10.782236210157,10.3361753540704,11.630573896295,14.8675150553263,10.0712412311878,17.1380488236753,7.76056787293567,13.3356441426523,20.2971379902908,31.6963362030877,21.6638714813456,13.2987716286794,25.1128308202714,14.6486070757918,6.2506827561904,14.1351410872926,18.2351761289614,12.9778642142105,14.5653105909346,22.6614272356039,18.2478476195126,30.1016673545158,10.9534788208725,3.70642765846759,3.73466510648602,5.8328969722285,2.79972843250725,5.75010257459886,25.8385213328914,26.1130371124084,24.1987535382574,6.94600477297057,12.3209379173665,9.7977697532714,27.7173551377649,23.8045940672415,19.0149421051854,4.06613438482959,5.33576877666684,3.1496490104849,3.9554654502679,0,4.49400165777607,8.06858441175265,14.2054768862614,8.77538599155989,11.9885227970288,21.9951257990929,20.5407743085001,17.0262210908786,12.4599112323707,7.35375029288017,39.6417171597799,16.4716666129892,16.2822925251618,28.6193244374521,22.2314973953855,23.962015045611,8.37548997004143,16.8828783009504,20.4749652020926,71.3001176846276,51.2538050876771,39.3302830691384,6.13382165998791,8.99301565270748,17.102004833399,12.9063581547208,4.75979933595425,10.2543606411185,11.0461990966104,12.9927797258227,15.870219474888,16.5317412900716,13.2490862347463,11.3068663843309,32.9573602277432,50.047326191584,56.0571527354621,42.6640021891999,3.89683873820185,3.29367825117628,5.05524445014783,15.186456002635,24.081223179187,21.3756680253348,17.1750473498474,17.6589977421042,16.3737003051802,17.0316583824463,37.8635636976969,17.7189893774842,19.5284024510155,18.7979163995885,22.1152637987469,25.0738617418484,26.0592991783264,21.819386391085,26.0948465705371,52.99332425909,61.3678850963423,15.0719662573069,14.8570754387341,7.7987355029143,13.5965142968179,25.1648274200102,26.992535566299,60.3140890141749,21.2065670634577,25.5715457330331,20.9865925005156,26.76980840618,38.4952795354196,25.7522429162893,24.0086620511991,23.3590460033986,27.7156543510559,20.921091503446,24.6685117833328,30.7437828384859,47.6935859050808,43.5586648968489,45.0705295132296,70.6260202117513,11.6406716183735,33.6608822698718,30.2635933561992,23.6731391021781,32.2534809101694,26.4671646556847,31.8962311432312,30.253208556411,5.61770549850588,7.20574139921202,6.81992398549422,22.9909607514407,28.1431271977315,21.9675714982438,26.7521551211288,28.3340493716262,27.4595460939533,20.2304531932855,25.4859731329638,29.8919276459954,26.9878153858108,25.2817894681807,25.2123997687611,20.4679982395465,17.564009223284,18.788898626452,18.9260953707715,52.8929707629522,17.1817767151575,16.3959351331397,20.2623838008472,27.6361639513922,29.2529137201152,28.235693447268,24.4615848229357,19.7834651157062,16.1339880925134,18.4462829290892,28.4008785944305,26.6601672535142,24.37051088989,22.4704852163555,19.4524244887225,21.706398784726,7.2073802362171,31.189843942456,30.4310886317317,30.1403965211065,33.3598277928316,37.0317129020882,37.6257395889331,25.0937251565324,23.3928104483648,23.6922554729857,10.0793893209631,18.6866518402025,16.7075145846223,18.2138311031732,20.2860121388503,18.3294641411837,17.0599320693551,16.686375972147,21.8882556146298,13.1789478330279,21.5652309791032,24.1891615984527,22.1546747911338,15.6598904327209,16.325164630494,15.4381926836277,16.0735275444946,26.7182890596384,34.2226450528254,31.4028408684098,33.5607055052558,43.5516269348721,38.8011134644202,45.4661399508671,52.019597555043,41.1924322746721,43.3716970748365,35.2306126638837,22.7944176062982,29.0744607748838,10.5553898757491,13.5976420954677,14.2611639175521,15.452457793065,18.9449696185595,21.2153152731888,17.5410391553043,26.0045055020504,23.0321000173867,23.0358859135017,36.8374010123086,22.7020358054924,34.7565931568535,43.5937857414802,25.0982635038434,30.9791209385991,32.4135977916149,39.5225219198823,34.2075605351927,18.8749539887291,45.7712355783549,47.6763655390628,37.1686387351896,23.5497217070332,20.5580018736031,25.4616857670462,15.9463022155617,33.5104311258881,33.3372498187005,38.8981090540931,30.658774541086,30.3395287618383,22.1379078007497,30.9406629744561,30.6395645178409,27.0091641046965,7.24408629183425,29.1498367642966,37.596129532162,25.6851097346982,32.9098041204242,9.74287837166718,15.2536610241412,13.9809166770121,28.668691747145,21.9298716412168,47.793470301988,29.6739590646527,24.2325858326367,25.2776985607394,20.6951394007194,22.6218868452822,22.042343622923,21.2578474002119,25.3716502496505,31.2691638627787,28.7057878214153,23.5641518402718,15.6380155594347,12.0358248998346,14.0963973280512,4.77335309007557,27.3630634447682,38.6306987541013,32.9416289506494,31.3632444021703,32.0992968706881,33.1766292106659,38.5991638237319,25.6520823144349,21.256855619854,16.776161453347,67.0794597034186,32.5946070375874,22.005979230794,35.3901162786167,25.444485225113,34.9739179765911,54.2190442543383,36.457227756306,39.6368321929187,33.8217769156408,46.3728310075163,41.3974568022914,14.5962155008918,18.8988161183282,17.1495486330689,23.9895772194425,25.0338507024394,32.6931622694315,29.2425263805663,33.1169955829924,38.1034033274999,33.9784243911153,38.3984050114625,38.0998892895705,47.9195298944433,21.9928472106755,3.99574716073316,7.98453323824334,4.86865387455827,20.28490737338,26.838593989519,47.2531190609544,20.7937327706694,30.5958983461572,28.8023439734704,24.8575627713876,26.3531936182122,17.7008777813998,15.7568979547248,14.3524840504043,14.8504950050997,9.90706647093285,17.672553950384,16.5683299760582,18.8892972603202,31.5229649986815,29.3661801897111,30.3883396335368,31.0227480689414,31.4372399449524,38.0041904540762,37.086310303001,39.7939819893851,36.3883984939868,38.2753742834262,38.6683999841456,32.4936030920492,33.5491798601515,34.0592330906787,30.4827962421167,36.3876783466846,30.6725660537291,33.7910438658711,32.5309613497018,31.8868404718436,32.1231209148401,34.8116837323089,32.9936365755386,38.5848459702855,38.7534904143878,38.597802276155,30.2530168153519,33.9510284614654,39.2799590160417,30.2519296216644,37.1361898555874,27.0092488491995,33.7762313785406,35.6877230315112,25.4806789496705,29.0075194472306,32.2306581072447,37.875089749631,29.7798415811346,22.9549157264217
|short_description=p1@Rev3l
}}
}}

Revision as of 15:08, 17 April 2012

Short description:p1@Rev3l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rev3l_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000019986, ENSMUST00000131186_5end
EntrezGene:Rev3l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rev3l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I328.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.94
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.32
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.78
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I214.87
Ileum epithelium, pool1.CNhs13199.10252-104B910.07
Ileum epithelium, pool2.CNhs13232.10253-104C117.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.66
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B330.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.11
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C327.72
Mouse Granule cells, donor2.CNhs12357.11731-123E323.80
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.03
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.96
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.33
Mouse Schwann, donor1.CNhs12507.11728-123D96.13
Mouse Schwann, donor2.CNhs12573.11746-123F98.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G632.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H150.05
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I856.06
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.19
accessory axillary lymph node, adult.CNhs10475.1063-29H924.08
adrenal gland, adult.CNhs10508.49-24D721.38
adrenal gland, embryo E14.CNhs11038.406-44C517.18
adrenal gland, embryo E16.CNhs11004.1254-43D617.66
adrenal gland, embryo E17.CNhs11043.1263-45I116.37
adrenal gland, embryo E18.CNhs11026.1262-18F517.03
adrenal gland, neonate N00.CNhs11191.1311-23C137.86
adrenal gland, neonate N25.CNhs11223.1377-27I317.72
amnion, adult pregnant day17.5.CNhs10488.583-22A819.53
aorta, adult.CNhs10498.46-23H118.80
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F525.07
bone (os femoris), neonate N16.CNhs11225.1525-43A626.06
bone (os femoris), neonate N20.CNhs11195.1350-25C321.82
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B252.99
cerebellum, neonate N30.CNhs11135.1395-42I261.37
colon, adult.CNhs10468.36-18H715.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.86
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.60
corpora quadrigemina, adult.CNhs10501.16-22A425.16
corpus striatum, adult.CNhs10487.19-21D826.99
corpus striatum, neonate N00.CNhs11226.630-43F160.31
cortex, adult.CNhs10473.12-14D521.21
cortex, neonate N30.CNhs11107.1392-42F225.57
diencephalon, adult.CNhs10482.20-12F220.99
diencephalon, neonate N30.CNhs11201.1388-42B226.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B138.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.75
epididymis, adult.CNhs10490.58-23B224.01
eyeball, adult.CNhs10484.31-12G423.36
eyeball, embryo E12.CNhs11016.345-16C627.72
eyeball, embryo E14.CNhs10521.399-16E220.92
eyeball, embryo E15.CNhs10593.426-16C924.67
eyeball, embryo E17.CNhs11023.1261-18D430.74
eyeball, neonate N00.CNhs11207.633-15C647.69
eyeball, neonate N01.CNhs11140.1532-43E743.56
eyeball, neonate N02.CNhs11205.1551-44G845.07
eyeball, neonate N16.CNhs11188.777-19A270.63
forelimb, embryo E11.CNhs10596.335-25E211.64
forelimb, embryo E12.CNhs10600.359-14H233.66
forelimb, embryo E13.CNhs10589.384-1E230.26
forelimb, embryo E14.CNhs10577.413-26A823.67
forelimb, embryo E15.CNhs11007.437-20E732.25
forelimb, embryo E17.CNhs10598.1517-43C426.47
forelimb, embryo E18.CNhs11008.1520-43B531.90
gonad, embryo E13.CNhs11044.1564-45I630.25
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E922.99
heart, embryo E12.CNhs11015.353-12F528.14
heart, embryo E13.CNhs11013.376-3I921.97
heart, embryo E14.CNhs10597.403-26D426.75
heart, embryo E15.CNhs11017.431-16C828.33
heart, embryo E16.CNhs11021.457-17C627.46
heart, embryo E17.CNhs11025.479-18E520.23
heart, embryo E18.CNhs11030.1283-20G325.49
heart, neonate N00.CNhs11213.639-21E329.89
heart, neonate N03.CNhs11221.1349-25I226.99
heart, neonate N10.CNhs11118.749-24G125.28
heart, neonate N16.CNhs11209.782-15G125.21
heart, neonate N20.CNhs11127.821-26I620.47
heart, neonate N25.CNhs11196.1351-25D317.56
heart, neonate N30.CNhs11202.1390-42D218.79
hippocampus, adult.CNhs10478.13-16E818.93
hippocampus, neonate N00.CNhs11228.627-43G152.89
intestinal mucosa, adult.CNhs10506.860-29I317.18
intestine, adult.CNhs10496.178-9A316.40
intestine, embryo E12.CNhs11019.1251-16I520.26
intestine, embryo E13.CNhs11010.381-16D527.64
intestine, embryo E15.CNhs10602.976-16D829.25
intestine, embryo E16.CNhs10585.463-22H428.24
intestine, embryo E17.CNhs10582.482-18D324.46
intestine, embryo E18.CNhs10526.1289-20F719.78
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E918.45
intestine, neonate N06.CNhs11102.688-20B828.40
intestine, neonate N07.CNhs11095.720-20F226.66
intestine, neonate N10.CNhs11098.755-23A524.37
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E319.45
intestine, neonate N30.CNhs11131.1384-42G121.71
kidney, embryo E14.CNhs10606.411-4I97.21
kidney, embryo E15.CNhs10997.434-16F831.19
kidney, embryo E16.CNhs10584.464-22A530.43
kidney, embryo E17.CNhs11028.483-18I230.14
kidney, embryo E18.CNhs11001.1288-20C733.36
kidney, neonate N00.CNhs11214.646-21G737.03
kidney, neonate N10.CNhs11206.758-6D537.63
kidney, neonate N20.CNhs11113.832-19I125.09
kidney, neonate N25.CNhs11122.1353-25F323.39
kidney, neonate N30.CNhs11203.1385-42H123.69
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F818.69
liver, embryo E13.CNhs10524.378-3H616.71
liver, embryo E14.CNhs10594.409-16E118.21
liver, embryo E15.CNhs10520.433-16D720.29
liver, embryo E16.CNhs10523.462-17F518.33
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F421.89
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H224.19
liver, neonate N10.CNhs11115.751-24B922.15
liver, neonate N20.CNhs11220.823-25A315.66
liver, neonate N25.CNhs11198.1368-26H116.33
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B116.07
lung, embryo E12.CNhs10522.354-16G226.72
lung, embryo E14.CNhs10604.404-26F834.22
lung, embryo E15.CNhs11020.432-17C531.40
lung, embryo E16.CNhs10998.458-17B633.56
lung, embryo E17.CNhs10605.480-44A643.55
lung, embryo E18.CNhs10583.1287-20I638.80
lung, neonate N00.CNhs11224.640-42C645.47
lung, neonate N06.CNhs11212.683-20E552.02
lung, neonate N07.CNhs11111.715-19A341.19
lung, neonate N10.CNhs11219.750-23E643.37
lung, neonate N20.CNhs11109.822-18A435.23
lung, neonate N25.CNhs11119.1359-25C722.79
lung, neonate N30.CNhs11133.1394-42H229.07
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H215.45
medulla oblongata, adult.CNhs10477.17-12C218.94
medulla oblongata, neonate N30.CNhs11200.1396-42A321.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E223.04
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E336.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.70
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D834.76
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D943.59
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D632.41
olfactory brain, adult.CNhs10489.18-22I939.52
ovary, adult.CNhs10507.91-2I734.21
ovary, embryo E18.CNhs11040.505-44H718.87
ovary, neonate N00.CNhs11217.1299-22I445.77
oviduct, adult pregnant day01.CNhs10500.988-6G647.68
pancreas, adult.CNhs10486.34-16E437.17
pancreas, embryo E14.CNhs11012.405-44F423.55
pancreas, embryo E15.CNhs11042.1556-45F220.56
pancreas, embryo E16.CNhs11003.460-26E525.46
pancreas, embryo E17.CNhs10599.1558-45G315.95
pancreas, embryo E18.CNhs10580.1535-43I733.51
pancreas, neonate N00.CNhs11105.645-26G933.34
pancreas, neonate N01.CNhs11138.1531-43D738.90
pancreas, neonate N02.CNhs11139.1539-43D830.66
pancreas, neonate N16.CNhs11136.787-43B630.34
pancreas, neonate N25.CNhs11094.1555-45E222.14
pancreas, neonate N30.CNhs11182.1548-44H530.94
pituitary gland, adult.CNhs10493.21-1G830.64
pituitary gland, embryo E12.CNhs11018.346-16E627.01
pituitary gland, embryo E13.CNhs11009.370-44C77.24
pituitary gland, embryo E14.CNhs11037.398-44A529.15
pituitary gland, embryo E15.CNhs10592.427-16B937.60
pituitary gland, embryo E16.CNhs11036.449-43F625.69
pituitary gland, embryo E17.CNhs11039.1265-44F532.91
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I715.25
placenta, adult pregnant day17.CNhs10464.577-18G313.98
prostate, adult.CNhs10470.859-1F828.67
skin, adult.CNhs10492.30-1C321.93
skin, neonate N00.CNhs11124.650-25G447.79
skin, neonate N03.CNhs11215.662-22H329.67
skin, neonate N06.CNhs11097.693-20I524.23
skin, neonate N10.CNhs11108.762-6C425.28
small intestine, neonate N16.CNhs11114.790-21I120.70
spinal cord, adult.CNhs10505.24-13C922.62
spleen, adult.CNhs10465.25-2G222.04
spleen, embryo E16.CNhs11035.461-43C121.26
spleen, embryo E18.CNhs11011.1271-21F225.37
spleen, neonate N10.CNhs11116.752-24D131.27
spleen, neonate N20.CNhs11112.824-19H128.71
spleen, neonate N25.CNhs11099.1354-25G323.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.10
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E327.36
stomach, embryo E15.CNhs10603.1252-16G838.63
stomach, embryo E16.CNhs11022.459-17D432.94
stomach, embryo E17.CNhs11006.1035-18D531.36
stomach, embryo E18.CNhs10999.1286-20C632.10
stomach, neonate N03.CNhs11193.1340-24B833.18
stomach, neonate N07.CNhs11210.718-18A938.60
stomach, neonate N25.CNhs11104.1355-25E425.65
stomach, neonate N30.CNhs11134.1386-42I121.26
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G567.08
testis, embryo E13.CNhs11031.389-23F532.59
testis, embryo E15.CNhs11034.443-27C522.01
testis, embryo E16.CNhs11033.470-26G535.39
testis, embryo E17.CNhs11029.486-18I525.44
testis, embryo E18.CNhs11027.503-18G534.97
testis, neonate N00.CNhs11189.1300-22B754.22
testis, neonate N07.CNhs11222.726-26I436.46
testis, neonate N10.CNhs11204.763-44D939.64
testis, neonate N20.CNhs11110.839-18H333.82
testis, neonate N30.CNhs11130.1391-42E246.37
thymus, adult.CNhs10471.38-12B541.40
thymus, embryo E14.CNhs11041.402-44I414.60
thymus, embryo E15.CNhs11005.430-45I218.90
thymus, embryo E16.CNhs11002.456-26C517.15
thymus, embryo E17.CNhs10581.478-18C123.99
thymus, embryo E18.CNhs10595.1273-19G425.03
thymus, neonate N02.CNhs11181.1541-43F832.69
thymus, neonate N03.CNhs11137.2104-43C729.24
thymus, neonate N06.CNhs11197.681-26C433.12
thymus, neonate N07.CNhs11211.713-19D338.10
thymus, neonate N10.CNhs11194.748-24E433.98
thymus, neonate N20.CNhs11186.820-7A238.40
thymus, neonate N25.CNhs11125.1362-25G738.10
thymus, neonate N30.CNhs11132.1393-42G247.92
tongue, adult.CNhs10499.32-1B421.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E420.28
uterus, adult pregnant day19.CNhs10497.590-15F526.84
uterus, adult.CNhs10509.92-27E547.25
vagina, adult.CNhs10502.89-27D520.79
vesicular gland, adult.CNhs10491.51-27F830.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I818.89
whole body, embryo E12.CNhs10587.857-27C931.52
whole body, embryo E13.CNhs10512.372-23H229.37
whole body, embryo E14.5.CNhs10578.420-27D230.39
whole body, embryo E14.CNhs10519.395-14B131.02
whole body, embryo E16.CNhs10514.453-14F231.44
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G538.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G537.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G536.39
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G538.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G538.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G534.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G536.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G533.79
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G531.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G532.12
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G534.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G538.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G538.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.28
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.78
whole body, embryo E17.5.CNhs10513.490-9F935.69
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B329.01
whole body, neonate N00.CNhs10525.657-19C232.23
whole body, neonate N01.CNhs10576.659-23C637.88
whole body, neonate N06.CNhs10515.692-21D129.78
whole body, neonate N10.CNhs10518.761-6B422.95





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:39451905..39451946,%2B&oldid=734876"