FFCP PHASE2:Mm9::chr1:23768815..23768838,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:280645 |HGNC= |MCL_coexpression_id=87 |TSSclassifier=NA |UniProt=uniprot:P59270 |association_with_transcript=-11bp_...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=280645 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |MCL_coexpression_id=87 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P59270 | ||
|association_with_transcript=-11bp_to_ENSMUST00000140583_5end | |association_with_transcript=-11bp_to_ENSMUST00000140583_5end | ||
|cluster_id=chr1:23768815..23768838,+ | |cluster_id=chr1:23768815..23768838,+ | ||
Latest revision as of 01:16, 27 September 2015
| Short description: | p2@B3gat2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_B3gat2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:87 |
| Association with transcript: | -11bp_to_ENSMUST00000140583_5end |
| EntrezGene: | B3gat2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@B3gat2 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.23e-30 | 23 |
| neuroblast (sensu Vertebrata) | 1.23e-30 | 23 |
| neuron | 2.10e-19 | 33 |
| neuronal stem cell | 2.10e-19 | 33 |
| neuroblast | 2.10e-19 | 33 |
| electrically signaling cell | 2.10e-19 | 33 |
| electrically responsive cell | 1.86e-15 | 39 |
| electrically active cell | 1.86e-15 | 39 |
| neural cell | 4.91e-15 | 43 |
| ectodermal cell | 1.51e-14 | 44 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.19e-24 | 54 |
| neurectoderm | 8.92e-24 | 64 |
| neural plate | 8.92e-24 | 64 |
| presumptive neural plate | 8.92e-24 | 64 |
| central nervous system | 1.43e-23 | 73 |
| nervous system | 1.14e-22 | 75 |
| neural tube | 2.08e-22 | 52 |
| neural rod | 2.08e-22 | 52 |
| future spinal cord | 2.08e-22 | 52 |
| neural keel | 2.08e-22 | 52 |
Showing 1 to 10 of 40 entries
