FFCP PHASE1:Mm9::chr1:158869759..158869788,-: Difference between revisions
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=78255 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q9ERD6,Q8C134 | ||
|association_with_transcript=-2bp_to_ENSMUST00000027886,ENSMUST00000063199,ENSMUST00000165172,ENSMUST00000172057,NM_001159965,NM_001159967,NM_001159968,NM_023884,NR_027640,uc007dcu.2,uc007dcv.2,uc007dcw.2,uc007dcx.2,uc007dcy.2,uc007dcz.2,uc007ddb.2,uc011wuj.1_5end | |association_with_transcript=-2bp_to_ENSMUST00000027886,ENSMUST00000063199,ENSMUST00000165172,ENSMUST00000172057,NM_001159965,NM_001159967,NM_001159968,NM_023884,NR_027640,uc007dcu.2,uc007dcv.2,uc007dcw.2,uc007dcx.2,uc007dcy.2,uc007dcz.2,uc007ddb.2,uc011wuj.1_5end | ||
|cluster_id=chr1:158869759..158869788,- | |cluster_id=chr1:158869759..158869788,- | ||
Latest revision as of 15:09, 26 September 2015
| Short description: | p4@Ralgps2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Ralgps2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | -2bp_to_ENSMUST00000027886, ENSMUST00000063199, ENSMUST00000165172, ENSMUST00000172057, NM_001159965, NM_001159967, NM_001159968, NM_023884, NR_027640, uc007dcu.2, uc007dcv.2, uc007dcw.2, uc007dcx.2, uc007dcy.2, uc007dcz.2, uc007ddb.2, uc011wuj.1_5end |
| EntrezGene: | Ralgps2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.43e-20 | 23 |
| neuroblast (sensu Vertebrata) | 1.43e-20 | 23 |
| neuron | 9.60e-14 | 33 |
| neuronal stem cell | 9.60e-14 | 33 |
| neuroblast | 9.60e-14 | 33 |
| electrically signaling cell | 9.60e-14 | 33 |
| electrically responsive cell | 2.78e-10 | 39 |
| electrically active cell | 2.78e-10 | 39 |
| neural cell | 1.47e-08 | 43 |
| ectodermal cell | 3.49e-08 | 44 |
| neurectodermal cell | 3.49e-08 | 44 |
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 3.74e-10 | 54 |
| neurectoderm | 1.56e-09 | 64 |
| neural plate | 1.56e-09 | 64 |
| presumptive neural plate | 1.56e-09 | 64 |
| gray matter | 2.23e-09 | 34 |
| structure with developmental contribution from neural crest | 4.07e-09 | 92 |
| central nervous system | 4.60e-09 | 73 |
| nervous system | 1.62e-08 | 75 |
| neural tube | 3.83e-08 | 52 |
| neural rod | 3.83e-08 | 52 |
| future spinal cord | 3.83e-08 | 52 |
| neural keel | 3.83e-08 | 52 |
| ectoderm-derived structure | 4.28e-08 | 95 |
| ectoderm | 4.28e-08 | 95 |
| presumptive ectoderm | 4.28e-08 | 95 |
| pre-chordal neural plate | 1.16e-07 | 49 |
| ecto-epithelium | 4.52e-07 | 73 |
