FFCP PHASE2:Mm9::chr1:134776977..134777031,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:16980 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:Q6PHP6 |association_with_transcript=45bp_to_...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=16980 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q6PHP6 | ||
|association_with_transcript=45bp_to_ENSMUST00000159088,NM_010732,uc007cpi.2_5end | |association_with_transcript=45bp_to_ENSMUST00000159088,NM_010732,uc007cpi.2_5end | ||
|cluster_id=chr1:134776977..134777031,+ | |cluster_id=chr1:134776977..134777031,+ | ||
Latest revision as of 09:13, 26 September 2015
| Short description: | p2@Lrrn2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Lrrn2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | 45bp_to_ENSMUST00000159088, NM_010732, uc007cpi.2_5end |
| EntrezGene: | Lrrn2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Lrrn2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.17e-15 | 23 |
| neuroblast (sensu Vertebrata) | 1.17e-15 | 23 |
| neural cell | 7.03e-15 | 43 |
| ectodermal cell | 3.25e-14 | 44 |
| neurectodermal cell | 3.25e-14 | 44 |
| neuron | 1.65e-13 | 33 |
| neuronal stem cell | 1.65e-13 | 33 |
| neuroblast | 1.65e-13 | 33 |
| electrically signaling cell | 1.65e-13 | 33 |
| electrically responsive cell | 1.06e-09 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 5.10e-40 | 73 |
| nervous system | 3.86e-38 | 75 |
| regional part of nervous system | 7.17e-36 | 54 |
| neural tube | 9.12e-34 | 52 |
| neural rod | 9.12e-34 | 52 |
| future spinal cord | 9.12e-34 | 52 |
| neural keel | 9.12e-34 | 52 |
| neurectoderm | 5.00e-31 | 64 |
| neural plate | 5.00e-31 | 64 |
| presumptive neural plate | 5.00e-31 | 64 |
Showing 1 to 10 of 43 entries
