FFCP PHASE2:Mm9::chr19:27291591..27291621,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:22359 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:E9Q643,uniprot:Q91YY0,uniprot:P98156,uniprot...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=22359 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=E9Q643,Q91YY0,P98156,Q3UVX6 | ||
|association_with_transcript=81bp_to_ENSMUST00000164746,ENSMUST00000172302,NM_001161420,NM_013703,uc008hbt.2,uc008hbu.2_5end | |association_with_transcript=81bp_to_ENSMUST00000164746,ENSMUST00000172302,NM_001161420,NM_013703,uc008hbt.2,uc008hbu.2_5end | ||
|cluster_id=chr19:27291591..27291621,+ | |cluster_id=chr19:27291591..27291621,+ |
Latest revision as of 13:52, 25 September 2015
Short description: | p5@Vldlr |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Vldlr_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 81bp_to_ENSMUST00000164746, ENSMUST00000172302, NM_001161420, NM_013703, uc008hbt.2, uc008hbu.2_5end |
EntrezGene: | Vldlr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@Vldlr |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.93e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.93e-17 | 23 |
neuron | 1.68e-10 | 33 |
neuronal stem cell | 1.68e-10 | 33 |
neuroblast | 1.68e-10 | 33 |
electrically signaling cell | 1.68e-10 | 33 |
electrically responsive cell | 3.38e-08 | 39 |
electrically active cell | 3.38e-08 | 39 |
neural cell | 4.91e-07 | 43 |
ectodermal cell | 8.83e-07 | 44 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.04e-35 | 54 |
neural tube | 2.18e-32 | 52 |
neural rod | 2.18e-32 | 52 |
future spinal cord | 2.18e-32 | 52 |
neural keel | 2.18e-32 | 52 |
central nervous system | 5.67e-32 | 73 |
nervous system | 8.29e-31 | 75 |
gray matter | 2.74e-29 | 34 |
brain | 8.41e-27 | 47 |
future brain | 8.41e-27 | 47 |
Showing 1 to 10 of 58 entries