FFCP PHASE1:Hg19::chr10:99446965..99447007,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=60370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30898 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5T686 | ||
|association_with_transcript=7bp_to_NM_021732,uc001koi.2_5end | |association_with_transcript=7bp_to_NM_021732,uc001koi.2_5end | ||
|cluster_id=chr10:99446965..99447007,- | |cluster_id=chr10:99446965..99447007,- |
Latest revision as of 06:58, 20 September 2015
Short description: | p1@AVPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AVPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_NM_021732, uc001koi.2_5end |
EntrezGene: | AVPI1 |
HGNC: | 30898 |
UniProt: | Q5T686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@AVPI1 |
---|
0
50
100
150
200
250
300
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.83e-17 | 160 |
endoderm | 5.83e-17 | 160 |
presumptive endoderm | 5.83e-17 | 160 |
digestive system | 1.98e-12 | 145 |
digestive tract | 1.98e-12 | 145 |
primitive gut | 1.98e-12 | 145 |
respiratory system | 9.20e-10 | 74 |
subdivision of digestive tract | 1.65e-09 | 118 |
surface structure | 4.65e-09 | 99 |
orifice | 1.31e-08 | 36 |
Showing 1 to 10 of 12 entries