FFCP PHASE1:Hg19::chr6:106535598..106535637,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9346 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B2REA5 | ||
|association_with_transcript=143bp_to_ENST00000424894_5end | |association_with_transcript=143bp_to_ENST00000424894_5end | ||
|cluster_id=chr6:106535598..106535637,+ | |cluster_id=chr6:106535598..106535637,+ | ||
Latest revision as of 14:58, 19 September 2015
| Short description: | p7@PRDM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_PRDM1_5end |
| Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
| Association with transcript: | 143bp_to_ENST00000424894_5end |
| EntrezGene: | PRDM1 |
| HGNC: | 9346 |
| UniProt: | B2REA5 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p7@PRDM1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage dendritic cell progenitor | 1.55e-95 | 61 |
| defensive cell | 6.32e-91 | 48 |
| phagocyte | 6.32e-91 | 48 |
| monopoietic cell | 3.94e-90 | 59 |
| monocyte | 3.94e-90 | 59 |
| monoblast | 3.94e-90 | 59 |
| promonocyte | 3.94e-90 | 59 |
| myeloid leukocyte | 2.13e-86 | 72 |
| granulocyte monocyte progenitor cell | 5.36e-86 | 67 |
| classical monocyte | 4.66e-85 | 42 |
Showing 1 to 10 of 37 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 9.24e-78 | 76 |
| bone element | 3.21e-71 | 82 |
| skeletal element | 7.68e-64 | 90 |
| hematopoietic system | 4.60e-63 | 98 |
| blood island | 4.60e-63 | 98 |
| immune system | 2.13e-61 | 93 |
| skeletal system | 2.91e-56 | 100 |
| hemolymphoid system | 4.39e-56 | 108 |
| musculoskeletal system | 9.75e-32 | 167 |
| lateral plate mesoderm | 5.77e-24 | 203 |
Showing 1 to 10 of 14 entries
