FFCP PHASE2:Hg19::chr10:52383145..52383177,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:259230 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:29799 |TSSclassifier=stro...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=259230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=29799 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 11:13, 18 September 2015
Short description: | p6@SGMS1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SGMS1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -398bp_to_uc009xou.1_5end |
EntrezGene: | SGMS1 |
HGNC: | 29799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@SGMS1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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leukocyte | 1.87e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 1.09e-26 | 120 |
hematopoietic cell | 3.16e-22 | 177 |
hematopoietic stem cell | 3.80e-22 | 168 |
nongranular leukocyte | 5.44e-22 | 115 |
hematopoietic oligopotent progenitor cell | 8.50e-21 | 161 |
hematopoietic multipotent progenitor cell | 8.50e-21 | 161 |
lymphoid lineage restricted progenitor cell | 2.10e-15 | 52 |
lymphocyte | 6.55e-15 | 53 |
common lymphoid progenitor | 6.55e-15 | 53 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
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adult organism | 7.30e-21 | 114 |
hematopoietic system | 7.01e-17 | 98 |
blood island | 7.01e-17 | 98 |
hemolymphoid system | 2.48e-15 | 108 |
blood | 1.86e-11 | 15 |
haemolymphatic fluid | 1.86e-11 | 15 |
organism substance | 1.86e-11 | 15 |
immune system | 1.21e-08 | 93 |
bone marrow | 7.92e-08 | 76 |
Showing 1 to 9 of 9 entries