FFCP PHASE2:Hg19::chr6:32557610..32557630,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:100507709,entrezgene:100507714,entrezgene:3123 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV1...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=100507709,100507714,3123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4948 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P01911,P04229,Q29974,Q9GIY3,P01912,Q5Y7D1,D7RIH8 | ||
|association_with_transcript=0bp_to_ENST00000360004,NM_001243965,NM_002124_5end | |association_with_transcript=0bp_to_ENST00000360004,NM_001243965,NM_002124_5end | ||
|cluster_id=chr6:32557610..32557630,- | |cluster_id=chr6:32557610..32557630,- |
Latest revision as of 03:23, 18 September 2015
Short description: | p2@HLA-DRB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLA-DRB1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 0bp_to_ENST00000360004, NM_001243965, NM_002124_5end |
EntrezGene: | 100507709,100507714,3123 |
HGNC: | 4948 |
UniProt: | P01911P04229Q29974Q9GIY3P01912Q5Y7D1D7RIH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@HLA-DRB1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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leukocyte | 8.81e-62 | 136 |
nongranular leukocyte | 3.32e-58 | 115 |
hematopoietic lineage restricted progenitor cell | 2.12e-53 | 120 |
hematopoietic stem cell | 4.84e-53 | 168 |
hematopoietic cell | 4.62e-51 | 177 |
hematopoietic oligopotent progenitor cell | 1.12e-49 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-49 | 161 |
macrophage dendritic cell progenitor | 7.82e-31 | 61 |
monopoietic cell | 7.38e-29 | 59 |
monocyte | 7.38e-29 | 59 |
Showing 1 to 10 of 44 entries
Ontology term | p-value | n |
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hematopoietic system | 1.54e-38 | 98 |
blood island | 1.54e-38 | 98 |
hemolymphoid system | 9.30e-35 | 108 |
bone marrow | 3.66e-26 | 76 |
immune system | 1.38e-25 | 93 |
bone element | 1.10e-22 | 82 |
skeletal element | 7.72e-19 | 90 |
adult organism | 2.66e-16 | 114 |
skeletal system | 1.39e-15 | 100 |
lateral plate mesoderm | 9.24e-11 | 203 |
Showing 1 to 10 of 14 entries