FFCP PHASE2:Hg19::chr4:46391095..46391114,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2555 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4076 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4076 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P47869,A8K0U7 | ||
|association_with_transcript=281bp_to_ENST00000356504,NM_001114175,uc003gxc.3_5end | |association_with_transcript=281bp_to_ENST00000356504,NM_001114175,uc003gxc.3_5end | ||
|cluster_id=chr4:46391095..46391114,- | |cluster_id=chr4:46391095..46391114,- |
Latest revision as of 21:30, 17 September 2015
Short description: | p14@GABRA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GABRA2_5end |
Coexpression cluster: | C278_amygdala_hippocampus_insula_medial_putamen_temporal_olfactory |
Association with transcript: | 281bp_to_ENST00000356504, NM_001114175, uc003gxc.3_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | P47869A8K0U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p14@GABRA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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regional part of cerebral cortex | 2.82e-100 | 22 |
regional part of telencephalon | 4.40e-89 | 32 |
cerebral hemisphere | 4.40e-89 | 32 |
cerebral cortex | 1.69e-88 | 25 |
pallium | 1.69e-88 | 25 |
brain grey matter | 7.02e-84 | 34 |
gray matter | 7.02e-84 | 34 |
telencephalon | 7.02e-84 | 34 |
neocortex | 4.08e-82 | 20 |
regional part of forebrain | 1.44e-69 | 41 |
Showing 1 to 10 of 70 entries