FFCP PHASE1:Hg19::chr11:1856186..1856232,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=90019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19264 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8WBL4 | ||
|association_with_transcript=0bp_to_ENST00000424556_5end | |association_with_transcript=0bp_to_ENST00000424556_5end | ||
|cluster_id=chr11:1856186..1856232,+ | |cluster_id=chr11:1856186..1856232,+ | ||
Latest revision as of 03:01, 17 September 2015
| Short description: | p1@SYT8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SYT8_5end |
| Coexpression cluster: | C1138_Mammary_salivary_glassy_gall_Small_oral_throat |
| Association with transcript: | 0bp_to_ENST00000424556_5end |
| EntrezGene: | SYT8 |
| HGNC: | 19264 |
| UniProt: | F8WBL4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SYT8 |
|---|
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25
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125
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 4.19e-25 | 42 |
| endodermal cell | 2.45e-18 | 58 |
| respiratory epithelial cell | 4.64e-18 | 13 |
| epithelial cell of alimentary canal | 7.13e-12 | 20 |
| transitional epithelial cell | 2.00e-10 | 4 |
| urothelial cell | 2.00e-10 | 4 |
| epithelial cell of tracheobronchial tree | 2.33e-09 | 9 |
| epithelial cell of lower respiratory tract | 2.33e-09 | 9 |
| acinar cell of salivary gland | 2.99e-09 | 3 |
| epithelial cell | 3.04e-09 | 253 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 3.12e-19 | 160 |
| endoderm | 3.12e-19 | 160 |
| presumptive endoderm | 3.12e-19 | 160 |
| respiratory system | 1.00e-18 | 74 |
| oral opening | 2.32e-18 | 22 |
| saliva-secreting gland | 2.98e-16 | 6 |
| gland of oral region | 2.98e-16 | 6 |
| gland of foregut | 2.98e-16 | 6 |
| oral gland | 2.98e-16 | 6 |
| oral cavity | 2.98e-16 | 6 |
Showing 1 to 10 of 46 entries
