FFCP PHASE2:Hg19::chr10:123748653..123748685,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10579 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11523 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11523 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O95359 | ||
|association_with_transcript=-3bp_to_ENST00000492689,NM_206861,NM_206862,uc001lfv.2,uc001lfw.2,uc009xzx.2,uc010qtv.1_5end | |association_with_transcript=-3bp_to_ENST00000492689,NM_206861,NM_206862,uc001lfv.2,uc001lfw.2,uc009xzx.2,uc010qtv.1_5end | ||
|cluster_id=chr10:123748653..123748685,+ | |cluster_id=chr10:123748653..123748685,+ |
Latest revision as of 19:36, 16 September 2015
Short description: | p8@TACC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TACC2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -3bp_to_ENST00000492689, NM_206861, NM_206862, uc001lfv.2, uc001lfw.2, uc009xzx.2, uc010qtv.1_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | O95359 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@TACC2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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chorionic membrane mesenchymal stem cell | 9.20e-29 | 3 |
germ line cell | 3.89e-13 | 7 |
germ cell | 3.89e-13 | 7 |
hepatocyte | 1.04e-12 | 12 |
epithelial cell of pancreas | 1.62e-10 | 4 |
endodermal cell | 2.86e-07 | 58 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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egg chorion | 9.20e-29 | 3 |
chorion | 4.96e-22 | 7 |
extraembryonic membrane | 3.85e-11 | 14 |
membranous layer | 3.85e-11 | 14 |
lower lobe of right lung | 1.10e-10 | 1 |
right lung lobe | 1.10e-10 | 1 |
lower lobe of lung | 1.10e-10 | 1 |
lobe of lung | 1.10e-10 | 1 |
right lung | 1.10e-10 | 1 |
liver | 4.26e-08 | 19 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.15e-11 | 1 |
endocrine pancreas cancer | 4.15e-11 | 1 |
pancreatic endocrine carcinoma | 4.15e-11 | 1 |
vascular disease | 1.21e-10 | 1 |
ischemia | 1.21e-10 | 1 |
extrinsic cardiomyopathy | 1.21e-10 | 1 |
myocardial ischemia | 1.21e-10 | 1 |
myocardial infarction | 1.21e-10 | 1 |
pancreatic cancer | 1.62e-10 | 4 |
disease of anatomical entity | 3.13e-08 | 39 |
Showing 1 to 10 of 11 entries