FFCP PHASE2:Hg19::chr12:11802575..11802592,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2120 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3495 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3495 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P41212 | ||
|association_with_transcript=-195bp_to_ENST00000396373,NM_001987,uc001qzz.2_5end | |association_with_transcript=-195bp_to_ENST00000396373,NM_001987,uc001qzz.2_5end | ||
|cluster_id=chr12:11802575..11802592,+ | |cluster_id=chr12:11802575..11802592,+ | ||
Latest revision as of 16:35, 16 September 2015
| Short description: | p6@ETV6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_ETV6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -195bp_to_ENST00000396373, NM_001987, uc001qzz.2_5end |
| EntrezGene: | ETV6 |
| HGNC: | 3495 |
| UniProt: | P41212 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@ETV6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid cell | 2.65e-18 | 108 |
| common myeloid progenitor | 2.65e-18 | 108 |
| hematopoietic stem cell | 9.39e-13 | 168 |
| hematopoietic oligopotent progenitor cell | 1.58e-12 | 161 |
| hematopoietic multipotent progenitor cell | 1.58e-12 | 161 |
| hematopoietic cell | 6.94e-12 | 177 |
| classical monocyte | 6.65e-10 | 42 |
| CD14-positive, CD16-negative classical monocyte | 6.65e-10 | 42 |
| granulocyte monocyte progenitor cell | 4.14e-08 | 67 |
| defensive cell | 6.69e-08 | 48 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.65e-07 | 98 |
| blood island | 1.65e-07 | 98 |
| hemolymphoid system | 4.02e-07 | 108 |
| bone marrow | 4.31e-07 | 76 |
| immune system | 6.45e-07 | 93 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 1.02e-14 | 31 |
| leukemia | 1.10e-11 | 39 |
| hematologic cancer | 4.08e-10 | 51 |
| immune system cancer | 4.08e-10 | 51 |
Showing 1 to 4 of 4 entries
