FFCP PHASE2:Hg19::chr2:27434468..27434481,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8884 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:11041 |TSSclassifier=strong...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=11041 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9Y289 | ||
|association_with_transcript=-66bp_to_BC015631_5end | |association_with_transcript=-66bp_to_BC015631_5end | ||
|cluster_id=chr2:27434468..27434481,- | |cluster_id=chr2:27434468..27434481,- | ||
Latest revision as of 16:18, 16 September 2015
| Short description: | p14@SLC5A6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_14_at_SLC5A6_5end |
| Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
| Association with transcript: | -66bp_to_BC015631_5end |
| EntrezGene: | SLC5A6 |
| HGNC: | 11041 |
| UniProt: | Q9Y289 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p14@SLC5A6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 4.14e-24 | 7 |
| germ cell | 4.14e-24 | 7 |
| sebum secreting cell | 2.49e-10 | 2 |
| epithelial cell of sweat gland | 2.49e-10 | 2 |
| epithelial cell of skin gland | 2.49e-10 | 2 |
| acinar cell of sebaceous gland | 2.49e-10 | 2 |
| CD1a-positive Langerhans cell | 3.27e-10 | 2 |
| immature CD1a-positive Langerhans cell | 3.27e-10 | 2 |
| amniotic epithelial cell | 3.58e-10 | 2 |
| placental epithelial cell | 2.32e-07 | 3 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| placenta | 3.57e-19 | 4 |
| allantois | 3.57e-19 | 4 |
| extraembryonic membrane | 3.07e-12 | 14 |
| membranous layer | 3.07e-12 | 14 |
| chorion | 2.18e-11 | 7 |
| skin gland | 2.49e-10 | 2 |
| epidermis gland | 2.49e-10 | 2 |
| gland of integumental system | 2.49e-10 | 2 |
| sebaceous gland | 2.49e-10 | 2 |
| skin sebaceous gland | 2.49e-10 | 2 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| islet cell tumor | 1.56e-19 | 1 |
| endocrine pancreas cancer | 1.56e-19 | 1 |
| pancreatic endocrine carcinoma | 1.56e-19 | 1 |
| germ cell and embryonal cancer | 4.13e-08 | 22 |
| germ cell cancer | 4.13e-08 | 22 |
Showing 1 to 5 of 5 entries
