FFCP PHASE2:Hg19::chr9:139922726..139922738,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:20 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:32 |TSSclassifie...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=32 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9BZC7 | ||
|association_with_transcript=1bp_to_ENST00000265662,ENST00000371605,NM_001606,uc004ckl.1,uc011mel.1,uc011mem.1_5end | |association_with_transcript=1bp_to_ENST00000265662,ENST00000371605,NM_001606,uc004ckl.1,uc011mel.1,uc011mem.1_5end | ||
|cluster_id=chr9:139922726..139922738,- | |cluster_id=chr9:139922726..139922738,- |
Latest revision as of 15:18, 16 September 2015
Short description: | p5@ABCA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 1bp_to_ENST00000265662, ENST00000371605, NM_001606, uc004ckl.1, uc011mel.1, uc011mem.1_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | Q9BZC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@ABCA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 3.12e-44 | 56 |
neural rod | 3.12e-44 | 56 |
future spinal cord | 3.12e-44 | 56 |
neural keel | 3.12e-44 | 56 |
regional part of nervous system | 1.79e-40 | 53 |
regional part of brain | 1.79e-40 | 53 |
central nervous system | 5.25e-38 | 81 |
brain | 4.52e-37 | 68 |
future brain | 4.52e-37 | 68 |
nervous system | 1.22e-36 | 89 |
Showing 1 to 10 of 59 entries