FFCP PHASE1:Hg19::chr10:118897911..118897974,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=11023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=12660 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5SQQ9 | ||
|association_with_transcript=-99bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | |association_with_transcript=-99bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | ||
|cluster_id=chr10:118897911..118897974,- | |cluster_id=chr10:118897911..118897974,- |
Latest revision as of 15:11, 16 September 2015
Short description: | p1@VAX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VAX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
EntrezGene: | VAX1 |
HGNC: | 12660 |
UniProt: | Q5SQQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@VAX1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 2.88e-15 | 8 |
neural cell | 2.75e-10 | 25 |
neuron | 3.16e-08 | 6 |
neuroblast | 3.16e-08 | 6 |
electrically signaling cell | 3.16e-08 | 6 |
astrocyte of the cerebral cortex | 1.81e-07 | 3 |
neurectodermal cell | 2.08e-07 | 59 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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telencephalon | 5.46e-50 | 34 |
cerebral hemisphere | 4.73e-48 | 32 |
regional part of forebrain | 2.35e-45 | 41 |
forebrain | 2.35e-45 | 41 |
anterior neural tube | 2.35e-45 | 41 |
future forebrain | 2.35e-45 | 41 |
nervous system | 1.27e-43 | 89 |
regional part of telencephalon | 4.16e-43 | 32 |
brain grey matter | 2.09e-40 | 34 |
gray matter | 2.09e-40 | 34 |
Showing 1 to 10 of 57 entries
Ontology term | p-value | n |
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neuroectodermal tumor | 1.80e-12 | 10 |
Showing 1 to 1 of 1 entries